FFCP PHASE1:Hg19::chr21:45509627..45509663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7109 | |EntrezGene=7109 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11868 | |HGNC=11868 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000469521_5end | |association_with_transcript=0bp_to_ENST00000469521_5end | ||
|cluster_id=chr21:45509627..45509663,+ | |||
|description=CAGE_peak_3_at_TRAPPC10_5end | |description=CAGE_peak_3_at_TRAPPC10_5end | ||
|id=chr21:45509627..45509663,+ | |id=chr21:45509627..45509663,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.18e-35!53;CL:0000051!1.18e-35!53;CL:0000838!1.95e-34!52;CL:0000738!1.41e-28!140;CL:0000791!3.68e-26!18;CL:0000789!3.68e-26!18;CL:0002420!3.68e-26!18;CL:0002419!3.68e-26!18;CL:0000790!3.68e-26!18;CL:0002087!9.23e-25!119;CL:0000037!2.92e-21!172;CL:0000566!2.92e-21!172;CL:0000988!3.15e-19!182;CL:0000236!4.71e-19!14;CL:0002031!2.65e-18!124;CL:0000084!1.78e-17!25;CL:0000827!1.78e-17!25;CL:0002032!1.92e-17!165;CL:0000837!1.92e-17!165;CL:0000625!3.71e-17!11;CL:0000945!2.29e-13!24;CL:0000826!2.29e-13!24;CL:0000624!1.48e-12!6;CL:0000094!4.45e-08!8;CL:0000898!1.59e-07!3;CL:0000623!2.30e-07!3;CL:0000825!2.30e-07!3;CL:0000842!2.94e-07!3 | |ontology_enrichment_celltype=CL:0000542!1.18e-35!53;CL:0000051!1.18e-35!53;CL:0000838!1.95e-34!52;CL:0000738!1.41e-28!140;CL:0000791!3.68e-26!18;CL:0000789!3.68e-26!18;CL:0002420!3.68e-26!18;CL:0002419!3.68e-26!18;CL:0000790!3.68e-26!18;CL:0002087!9.23e-25!119;CL:0000037!2.92e-21!172;CL:0000566!2.92e-21!172;CL:0000988!3.15e-19!182;CL:0000236!4.71e-19!14;CL:0002031!2.65e-18!124;CL:0000084!1.78e-17!25;CL:0000827!1.78e-17!25;CL:0002032!1.92e-17!165;CL:0000837!1.92e-17!165;CL:0000625!3.71e-17!11;CL:0000945!2.29e-13!24;CL:0000826!2.29e-13!24;CL:0000624!1.48e-12!6;CL:0000094!4.45e-08!8;CL:0000898!1.59e-07!3;CL:0000623!2.30e-07!3;CL:0000825!2.30e-07!3;CL:0000842!2.94e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.68e-43;18!CL:0000789;3.68e-43;18!CL:0002419;3.68e-43;18!CL:0000542;2.20e-31;53!CL:0000084;6.31e-30;25!CL:0000236;1.25e-28;13!CL:0000625;1.01e-27;11!CL:0000624;5.92e-20;6!CL:0000945;2.68e-17;24!CL:0000898;1.55e-11;3!CL:0000623;3.20e-11;3!CL:0000226;4.26e-11;3!CL:0000842;4.26e-11;3!CL:0002087;1.47e-09;104!CL:0000815;2.60e-08;2!CL:0000792;2.60e-08;2!CL:0002677;2.60e-08;2 | |ontology_enrichment_celltype_v019=CL:0000791;3.68e-43;18!CL:0000789;3.68e-43;18!CL:0002419;3.68e-43;18!CL:0000542;2.20e-31;53!CL:0000084;6.31e-30;25!CL:0000236;1.25e-28;13!CL:0000625;1.01e-27;11!CL:0000624;5.92e-20;6!CL:0000945;2.68e-17;24!CL:0000898;1.55e-11;3!CL:0000623;3.20e-11;3!CL:0000226;4.26e-11;3!CL:0000842;4.26e-11;3!CL:0002087;1.47e-09;104!CL:0000815;2.60e-08;2!CL:0000792;2.60e-08;2!CL:0002677;2.60e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.64e-54,52;CL:0000542,1.28e-52,53;CL:0000051,1.28e-52,53;CL:0000791,3.76e-43,18;CL:0000789,3.76e-43,18;CL:0002420,3.76e-43,18;CL:0002419,3.76e-43,18;CL:0000790,3.76e-43,18;CL:0000738,1.80e-30,136;CL:0000084,6.41e-30,25;CL:0000827,6.41e-30,25;CL:0002087,7.09e-30,115;CL:0000625,8.18e-28,11;CL:0000236,1.01e-26,14;CL:0002031,6.55e-23,120;CL:0000037,8.86e-23,168;CL:0000988,4.06e-21,177;CL:0000624,7.75e-20,6;CL:0002032,1.41e-18,161;CL:0000837,1.41e-18,161;CL:0000945,1.79e-17,24;CL:0000826,1.79e-17,24;CL:0000898,1.76e-11,3;CL:0000623,3.26e-11,3;CL:0000825,3.26e-11,3;CL:0000226,4.89e-11,3;CL:0000842,4.89e-11,3;CL:0000815,2.84e-08,2;CL:0000792,2.84e-08,2;CL:0002677,2.84e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.68e-43;18!CL:0000051;2.20e-31;53 | |ontology_enrichment_development_v019=CL:0000790;3.68e-43;18!CL:0000051;2.20e-31;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.63e-09!15;UBERON:0000179!4.63e-09!15;UBERON:0000463!4.63e-09!15 | |ontology_enrichment_uberon=UBERON:0000178!4.63e-09!15;UBERON:0000179!4.63e-09!15;UBERON:0000463!4.63e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.60e-07;15!UBERON:0000179;2.60e-07;15!UBERON:0000463;2.60e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.60e-07;15!UBERON:0000179;2.60e-07;15!UBERON:0000463;2.60e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.37e-07,15;UBERON:0000179,3.37e-07,15;UBERON:0000463,3.37e-07,15 | |||
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| ||
|short_description=p3@TRAPPC10 | |short_description=p3@TRAPPC10 | ||
}} | }} |
Latest revision as of 17:39, 18 September 2015
Short description: | p3@TRAPPC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRAPPC10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000469521_5end |
EntrezGene: | TRAPPC10 |
HGNC: | 11868 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.64e-54 | 52 |
lymphocyte | 1.28e-52 | 53 |
common lymphoid progenitor | 1.28e-52 | 53 |
mature alpha-beta T cell | 3.76e-43 | 18 |
alpha-beta T cell | 3.76e-43 | 18 |
immature T cell | 3.76e-43 | 18 |
mature T cell | 3.76e-43 | 18 |
immature alpha-beta T cell | 3.76e-43 | 18 |
leukocyte | 1.80e-30 | 136 |
T cell | 6.41e-30 | 25 |
pro-T cell | 6.41e-30 | 25 |
nongranular leukocyte | 7.09e-30 | 115 |
CD8-positive, alpha-beta T cell | 8.18e-28 | 11 |
B cell | 1.01e-26 | 14 |
hematopoietic lineage restricted progenitor cell | 6.55e-23 | 120 |
hematopoietic stem cell | 8.86e-23 | 168 |
hematopoietic cell | 4.06e-21 | 177 |
CD4-positive, alpha-beta T cell | 7.75e-20 | 6 |
hematopoietic oligopotent progenitor cell | 1.41e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-18 | 161 |
lymphocyte of B lineage | 1.79e-17 | 24 |
pro-B cell | 1.79e-17 | 24 |
naive T cell | 1.76e-11 | 3 |
natural killer cell | 3.26e-11 | 3 |
pro-NK cell | 3.26e-11 | 3 |
single nucleate cell | 4.89e-11 | 3 |
mononuclear cell | 4.89e-11 | 3 |
regulatory T cell | 2.84e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.84e-08 | 2 |
naive regulatory T cell | 2.84e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.37e-07 | 15 |
haemolymphatic fluid | 3.37e-07 | 15 |
organism substance | 3.37e-07 | 15 |