FFCP PHASE1:Hg19::chr1:173445903..173445927,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=9588 | |EntrezGene=9588 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=16753 | |HGNC=16753 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P30041 | |UniProt=P30041 | ||
|association_with_transcript=-477bp_to_ENST00000340385_5end | |association_with_transcript=-477bp_to_ENST00000340385_5end | ||
|cluster_id=chr1:173445903..173445927,+ | |||
|coexpression_cluster_id=C8 | |coexpression_cluster_id=C8 | ||
|description=CAGE_peak_7_at_PRDX6_5end | |description=CAGE_peak_7_at_PRDX6_5end | ||
Latest revision as of 17:37, 18 September 2015
| Short description: | p7@PRDX6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_PRDX6_5end |
| Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
| Association with transcript: | -477bp_to_ENST00000340385_5end |
| EntrezGene: | PRDX6 |
| HGNC: | 16753 |
| UniProt: | P30041 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@PRDX6 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CD4-positive, alpha-beta T cell | 1.73e-27 | 6 |
| granulocyte | 4.29e-27 | 8 |
| leukocyte | 3.52e-25 | 136 |
| mature alpha-beta T cell | 4.18e-24 | 18 |
| alpha-beta T cell | 4.18e-24 | 18 |
| immature T cell | 4.18e-24 | 18 |
| mature T cell | 4.18e-24 | 18 |
| immature alpha-beta T cell | 4.18e-24 | 18 |
| hematopoietic stem cell | 8.22e-24 | 168 |
| hematopoietic cell | 3.17e-22 | 177 |
Showing 1 to 10 of 47 entries
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 1.21e-09 | 371 |
Showing 1 to 1 of 1 entries
