FFCP PHASE1:Hg19::chr21:45467027..45467028,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:45467027..45467028,-
|short_description=p1@H2AFZP1
|description=CAGE_peak_1_at_H2AFZP1_5end
|association_with_transcript=-105bp_to_ENST00000416034_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4742 | |HGNC=4742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-105bp_to_ENST00000416034_5end | |||
|cluster_id=chr21:45467027..45467028,- | |||
|description=CAGE_peak_1_at_H2AFZP1_5end | |||
|id=chr21:45467027..45467028,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;8.69e-18;4!CL:0002222;8.69e-18;4!CL:0002224;8.69e-18;4!CL:0002569;2.45e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,8.69e-18,4;CL:0002222,8.69e-18,4;CL:0002224,8.69e-18,4;CL:0002569,2.19e-12,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!2.33e-07!10;DOID:14566!4.73e-07!239;DOID:162!6.45e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.38e-27;10!UBERON:0010077;8.69e-18;4!UBERON:0005389;8.69e-18;4!UBERON:0000484;8.69e-18;4!UBERON:0000965;8.69e-18;4!UBERON:0001803;8.69e-18;4!UBERON:0003422;2.45e-12;6!UBERON:0000478;3.97e-12;24!UBERON:0003104;8.99e-11;7!UBERON:0009142;8.99e-11;7!UBERON:0007625;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.38e-27,10;UBERON:0000358,2.38e-27,10;UBERON:0000307,2.38e-27,10;UBERON:0000091,2.38e-27,10;UBERON:0000087,2.38e-27,10;UBERON:0007010,2.38e-27,10;UBERON:0007806,2.38e-27,10;UBERON:0008780,2.38e-27,10;UBERON:0005728,2.38e-27,10;UBERON:0010077,8.69e-18,4;UBERON:0005389,8.69e-18,4;UBERON:0000484,8.69e-18,4;UBERON:0002546,8.69e-18,4;UBERON:0000965,8.69e-18,4;UBERON:0001803,8.69e-18,4;UBERON:0003073,8.69e-18,4;UBERON:0005426,8.69e-18,4;UBERON:0003422,2.19e-12,6;UBERON:0000478,3.97e-12,24;UBERON:0000076,1.35e-09,8;UBERON:0007625,2.47e-07,11 | |||
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| ||
|short_description=p1@H2AFZP1 | |||
}} | }} |
Latest revision as of 17:36, 18 September 2015
Short description: | p1@H2AFZP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_H2AFZP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -105bp_to_ENST00000416034_5end |
EntrezGene: | NA |
HGNC: | 4742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 8.69e-18 | 4 |
vertebrate lens cell | 8.69e-18 | 4 |
lens epithelial cell | 8.69e-18 | 4 |
mesenchymal stem cell of umbilical cord | 2.19e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.38e-27 | 10 |
blastocyst | 2.38e-27 | 10 |
blastula | 2.38e-27 | 10 |
bilaminar disc | 2.38e-27 | 10 |
inner cell mass | 2.38e-27 | 10 |
cleaving embryo | 2.38e-27 | 10 |
connecting stalk | 2.38e-27 | 10 |
inner cell mass derived epiblast | 2.38e-27 | 10 |
extraembryonic mesoderm | 2.38e-27 | 10 |
cuboidal epithelium | 8.69e-18 | 4 |
transparent eye structure | 8.69e-18 | 4 |
simple cuboidal epithelium | 8.69e-18 | 4 |
cranial placode | 8.69e-18 | 4 |
lens of camera-type eye | 8.69e-18 | 4 |
epithelium of lens | 8.69e-18 | 4 |
lens placode | 8.69e-18 | 4 |
lens vesicle | 8.69e-18 | 4 |
mesenchyme of umbilical cord | 2.19e-12 | 6 |
extraembryonic structure | 3.97e-12 | 24 |
external ectoderm | 1.35e-09 | 8 |
pigment epithelium of eye | 2.47e-07 | 11 |