FFCP PHASE1:Hg19::chr19:45971060..45971122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2354 | |EntrezGene=2354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3797 | |HGNC=3797 | ||
|TSSclassifier=strong | |||
|UniProt=P53539,E9PHJ3,E7EPR6,E7EXA9,A8VJE1 | |UniProt=P53539,E9PHJ3,E7EPR6,E7EXA9,A8VJE1 | ||
|association_with_transcript=-130bp_to_ENST00000353609,ENST00000417353,ENST00000443841,ENST00000455928,NM_001114171,NM_006732,uc002pbw.2,uc002pbx.3,uc002pby.3,uc010eka.1,uc010ekb.1,uc010ekc.1,uc010ekd.1,uc010eke.2,uc010ekf.2,uc010ekg.2_5end | |association_with_transcript=-130bp_to_ENST00000353609,ENST00000417353,ENST00000443841,ENST00000455928,NM_001114171,NM_006732,uc002pbw.2,uc002pbx.3,uc002pby.3,uc010eka.1,uc010ekb.1,uc010ekc.1,uc010ekd.1,uc010eke.2,uc010ekf.2,uc010ekg.2_5end | ||
|cluster_id=chr19:45971060..45971122,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_3_at_FOSB_5end | |description=CAGE_peak_3_at_FOSB_5end | ||
|id=chr19:45971060..45971122,+ | |id=chr19:45971060..45971122,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.12e-34!42;CL:0000860!4.19e-31!45;CL:0000738!4.35e-30!140;CL:0000766!4.28e-29!76;CL:0000557!1.70e-25!71;CL:0002031!6.39e-22!124;CL:0000839!9.51e-22!70;CL:0002009!1.08e-21!65;CL:0000037!1.18e-21!172;CL:0000566!1.18e-21!172;CL:0002087!1.36e-20!119;CL:0002194!5.07e-20!63;CL:0000576!5.07e-20!63;CL:0000040!5.07e-20!63;CL:0000559!5.07e-20!63;CL:0000988!4.38e-19!182;CL:0002032!4.83e-18!165;CL:0000837!4.83e-18!165;CL:0000763!5.97e-17!112;CL:0000049!5.97e-17!112;CL:0000134!1.21e-11!358;CL:0002320!3.13e-11!365;CL:0000219!2.78e-09!390;CL:0000094!2.08e-08!8;CL:0000034!1.53e-07!444;CL:0002393!3.75e-07!9;CL:0002397!3.75e-07!9;CL:0000048!3.98e-07!430 | |ontology_enrichment_celltype=CL:0002057!2.12e-34!42;CL:0000860!4.19e-31!45;CL:0000738!4.35e-30!140;CL:0000766!4.28e-29!76;CL:0000557!1.70e-25!71;CL:0002031!6.39e-22!124;CL:0000839!9.51e-22!70;CL:0002009!1.08e-21!65;CL:0000037!1.18e-21!172;CL:0000566!1.18e-21!172;CL:0002087!1.36e-20!119;CL:0002194!5.07e-20!63;CL:0000576!5.07e-20!63;CL:0000040!5.07e-20!63;CL:0000559!5.07e-20!63;CL:0000988!4.38e-19!182;CL:0002032!4.83e-18!165;CL:0000837!4.83e-18!165;CL:0000763!5.97e-17!112;CL:0000049!5.97e-17!112;CL:0000134!1.21e-11!358;CL:0002320!3.13e-11!365;CL:0000219!2.78e-09!390;CL:0000094!2.08e-08!8;CL:0000034!1.53e-07!444;CL:0002393!3.75e-07!9;CL:0002397!3.75e-07!9;CL:0000048!3.98e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.71e-35;33!CL:0002057;9.71e-35;33!CL:0000473;9.29e-25;39!CL:0000234;9.29e-25;39!CL:0000766;7.83e-21;69!CL:0000576;1.92e-19;48!CL:0000094;4.54e-18;8!CL:0000081;8.20e-13;11!CL:0002087;3.48e-12;104!CL:0000767;2.43e-10;3!CL:0000738;3.75e-10;136!CL:0000763;1.42e-09;100!CL:0000623;2.50e-09;3!CL:0000226;2.76e-09;3!CL:0000842;2.76e-09;3!CL:0000988;1.34e-07;177!CL:0000771;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.63e-48,136;CL:0000766,1.03e-41,72;CL:0000037,3.69e-40,168;CL:0000860,4.15e-38,42;CL:0002057,4.15e-38,42;CL:0000988,1.99e-37,177;CL:0000557,4.47e-34,67;CL:0002032,1.34e-33,161;CL:0000837,1.34e-33,161;CL:0000473,1.96e-32,48;CL:0000234,1.96e-32,48;CL:0002031,2.73e-32,120;CL:0002087,3.23e-30,115;CL:0000763,8.09e-30,108;CL:0000049,8.09e-30,108;CL:0000839,7.99e-28,66;CL:0002009,1.04e-27,61;CL:0002194,1.64e-24,59;CL:0000576,1.64e-24,59;CL:0000040,1.64e-24,59;CL:0000559,1.64e-24,59;CL:0000094,4.44e-18,8;CL:0000134,9.70e-18,354;CL:0002320,4.12e-17,361;CL:0000034,3.42e-15,441;CL:0000219,6.66e-15,386;CL:0000048,1.21e-13,427;CL:0000723,3.02e-13,433;CL:0000081,8.07e-13,11;CL:0000767,2.44e-10,3;CL:0000623,2.40e-09,3;CL:0000825,2.40e-09,3;CL:0000226,2.47e-09,3;CL:0000842,2.47e-09,3;CL:0000771,1.99e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-26;42!CL:0000049;3.32e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.63e-25!80;UBERON:0001474!8.58e-24!86;UBERON:0002390!1.79e-20!102;UBERON:0003061!1.79e-20!102;UBERON:0004765!1.77e-18!101;UBERON:0001434!1.77e-18!101;UBERON:0002193!4.97e-17!112;UBERON:0002405!1.43e-15!115;UBERON:0002384!3.82e-10!375 | |ontology_enrichment_uberon=UBERON:0002371!1.63e-25!80;UBERON:0001474!8.58e-24!86;UBERON:0002390!1.79e-20!102;UBERON:0003061!1.79e-20!102;UBERON:0004765!1.77e-18!101;UBERON:0001434!1.77e-18!101;UBERON:0002193!4.97e-17!112;UBERON:0002405!1.43e-15!115;UBERON:0002384!3.82e-10!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.91e-31,76;UBERON:0001474,2.32e-30,82;UBERON:0002390,1.39e-27,98;UBERON:0003061,1.39e-27,98;UBERON:0004765,7.12e-27,90;UBERON:0002193,3.69e-24,108;UBERON:0002405,5.63e-24,93;UBERON:0001434,2.66e-23,100;UBERON:0002384,2.95e-16,371;UBERON:0002204,1.58e-10,167;UBERON:0003081,4.18e-10,203 | |||
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| ||
|short_description=p3@FOSB | |short_description=p3@FOSB | ||
}} | }} |
Latest revision as of 17:29, 18 September 2015
Short description: | p3@FOSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOSB_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -130bp_to_ENST00000353609, ENST00000417353, ENST00000443841, ENST00000455928, NM_001114171, NM_006732, uc002pbw.2, uc002pbx.3, uc002pby.3, uc010eka.1, uc010ekb.1, uc010ekc.1, uc010ekd.1, uc010eke.2, uc010ekf.2, uc010ekg.2_5end |
EntrezGene: | FOSB |
HGNC: | 3797 |
UniProt: | P53539E9PHJ3E7EPR6E7EXA9A8VJE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.91e-31 | 76 |
bone element | 2.32e-30 | 82 |
hematopoietic system | 1.39e-27 | 98 |
blood island | 1.39e-27 | 98 |
skeletal element | 7.12e-27 | 90 |
hemolymphoid system | 3.69e-24 | 108 |
immune system | 5.63e-24 | 93 |
skeletal system | 2.66e-23 | 100 |
connective tissue | 2.95e-16 | 371 |
musculoskeletal system | 1.58e-10 | 167 |
lateral plate mesoderm | 4.18e-10 | 203 |