FFCP PHASE1:Hg19::chr1:59250432..59250470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100131060 | |EntrezGene=100131060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-352bp_to_ENST00000544621,NR_034014,NR_034015,uc001czf.2,uc010oop.1_5end | |association_with_transcript=-352bp_to_ENST00000544621,NR_034014,NR_034015,uc001czf.2,uc010oop.1_5end | ||
|cluster_id=chr1:59250432..59250470,+ | |||
|coexpression_cluster_id=C8 | |coexpression_cluster_id=C8 | ||
|description=CAGE_peak_3_at_LOC100131060_5end | |description=CAGE_peak_3_at_LOC100131060_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000838!4.63e-10!52;CL:0000542!9.90e-10!53;CL:0000051!9.90e-10!53;CL:0000236!4.19e-09!14;CL:0000738!1.47e-07!140 | |ontology_enrichment_celltype=CL:0000838!4.63e-10!52;CL:0000542!9.90e-10!53;CL:0000051!9.90e-10!53;CL:0000236!4.19e-09!14;CL:0000738!1.47e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000236;9.23e-21;13!CL:0000623;4.33e-19;3!CL:0002577;3.43e-18;3!CL:0000542;1.28e-14;53!CL:0000791;2.20e-11;18!CL:0000789;2.20e-11;18!CL:0002419;2.20e-11;18!CL:0000945;7.47e-11;24!CL:0000624;3.08e-09;6!CL:0002393;5.04e-09;6!CL:0002397;5.04e-09;6!CL:0000084;4.99e-08;25!CL:0002581;5.77e-07;1!CL:0002591;5.77e-07;1 | |ontology_enrichment_celltype_v019=CL:0000236;9.23e-21;13!CL:0000623;4.33e-19;3!CL:0002577;3.43e-18;3!CL:0000542;1.28e-14;53!CL:0000791;2.20e-11;18!CL:0000789;2.20e-11;18!CL:0002419;2.20e-11;18!CL:0000945;7.47e-11;24!CL:0000624;3.08e-09;6!CL:0002393;5.04e-09;6!CL:0002397;5.04e-09;6!CL:0000084;4.99e-08;25!CL:0002581;5.77e-07;1!CL:0002591;5.77e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.12e-25,52;CL:0000542,3.97e-25,53;CL:0000051,3.97e-25,53;CL:0000236,1.79e-19,14;CL:0000623,4.49e-19,3;CL:0000825,4.49e-19,3;CL:0002577,3.55e-18,3;CL:0000738,6.32e-16,136;CL:0002087,6.93e-16,115;CL:0002031,4.90e-15,120;CL:0000037,5.01e-12,168;CL:0002032,1.95e-11,161;CL:0000837,1.95e-11,161;CL:0000791,1.96e-11,18;CL:0000789,1.96e-11,18;CL:0002420,1.96e-11,18;CL:0002419,1.96e-11,18;CL:0000790,1.96e-11,18;CL:0000988,3.49e-11,177;CL:0000945,5.38e-11,24;CL:0000826,5.38e-11,24;CL:0000624,2.64e-09,6;CL:0000084,4.60e-08,25;CL:0000827,4.60e-08,25;CL:0002581,4.85e-07,1;CL:0002591,8.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.28e-14;53!CL:0000790;2.20e-11;18 | |ontology_enrichment_development_v019=CL:0000051;1.28e-14;53!CL:0000790;2.20e-11;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;8.82e-14;4 | |ontology_enrichment_uberon_v019=UBERON:0001987;8.82e-14;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,9.05e-14,4;UBERON:0004340,9.05e-14,4;UBERON:0003124,4.54e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.786728553697808,1.91914699048606,0.928896739896456,0.919421224478927,0.30120591877825,0,0.154934401160603,0,0,1.66198622559563,1.40381113229099,1.51907609501096,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,1.70692089026603,0.800791974072025,1.72425731986345,1.32208974556972,1.90810750907073,3.41527781465669,1.17447437874188,3.05818582500183,0,0.560508562981536,0,1.7703879310245,1.17903228824749,4.72883447698871,0,0.651844533267181,0.946895611469467,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0.68725489096526,1.01207876807801,0,0,0.950452044448374,0,0,0,0,0,6.8546292696409,6.68600489458768,5.06885413589796,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0.56530794192401,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0,1.19168262731897,0.286836620748814,0,0,3.20246987189115,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,1.00883967391873,0.88369703398466,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,4.92576900504818,9.27198571895924,6.28880877770767,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,1.07857100409308,0.426910231213777,1.21251028578504,3.32870879020994,2.72151263996712,0.248107807818777,0,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0,0,0.510450849978337,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0.195984794828755,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0.346576998451015,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0.269475606319761,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.786728553697808,1.91914699048606,0.928896739896456,0.919421224478927,0.30120591877825,0,0.154934401160603,0,0,1.66198622559563,1.40381113229099,1.51907609501096,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,1.70692089026603,0.800791974072025,1.72425731986345,1.32208974556972,1.90810750907073,3.41527781465669,1.17447437874188,3.05818582500183,0,0.560508562981536,0,1.7703879310245,1.17903228824749,4.72883447698871,0,0.651844533267181,0.946895611469467,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0.68725489096526,1.01207876807801,0,0,0.950452044448374,0,0,0,0,0,6.8546292696409,6.68600489458768,5.06885413589796,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0.56530794192401,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0,1.19168262731897,0.286836620748814,0,0,3.20246987189115,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,1.00883967391873,0.88369703398466,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,4.92576900504818,9.27198571895924,6.28880877770767,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,1.07857100409308,0.426910231213777,1.21251028578504,3.32870879020994,2.72151263996712,0.248107807818777,0,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0,0,0.510450849978337,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0.195984794828755,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0.346576998451015,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p3@LOC100131060 | |short_description=p3@LOC100131060 | ||
}} | }} |
Latest revision as of 17:15, 18 September 2015
Short description: | p3@LOC100131060 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100131060_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -352bp_to_ENST00000544621, NR_034014, NR_034015, uc001czf.2, uc010oop.1_5end |
EntrezGene: | LOC100131060 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.12e-25 | 52 |
lymphocyte | 3.97e-25 | 53 |
common lymphoid progenitor | 3.97e-25 | 53 |
B cell | 1.79e-19 | 14 |
natural killer cell | 4.49e-19 | 3 |
pro-NK cell | 4.49e-19 | 3 |
placental epithelial cell | 3.55e-18 | 3 |
leukocyte | 6.32e-16 | 136 |
nongranular leukocyte | 6.93e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 4.90e-15 | 120 |
hematopoietic stem cell | 5.01e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.95e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-11 | 161 |
mature alpha-beta T cell | 1.96e-11 | 18 |
alpha-beta T cell | 1.96e-11 | 18 |
immature T cell | 1.96e-11 | 18 |
mature T cell | 1.96e-11 | 18 |
immature alpha-beta T cell | 1.96e-11 | 18 |
hematopoietic cell | 3.49e-11 | 177 |
lymphocyte of B lineage | 5.38e-11 | 24 |
pro-B cell | 5.38e-11 | 24 |
CD4-positive, alpha-beta T cell | 2.64e-09 | 6 |
T cell | 4.60e-08 | 25 |
pro-T cell | 4.60e-08 | 25 |
perirenal preadipocyte | 4.85e-07 | 1 |
smooth muscle cell of the pulmonary artery | 8.18e-07 | 1 |