FFCP PHASE1:Hg19::chr19:45927097..45927123,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:45927097..45927123,- to FFCP PHASE1:Hg19::chr19:45927097..45927123,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2067 | |EntrezGene=2067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3433 | |HGNC=3433 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWP0 | |UniProt=F5GWP0 | ||
|association_with_transcript=49bp_to_ENST00000428893_5end | |||
|cluster_id=chr19:45927097..45927123,- | |||
|description=CAGE_peak_3_at_ERCC1_5end | |||
|id=chr19:45927097..45927123,- | |||
|ontology_enrichment_celltype=CL:0000055!5.76e-17!180;CL:0000057!2.56e-09!75;CL:0000183!6.02e-09!59;CL:0000187!3.04e-08!54;CL:0000393!4.36e-08!60;CL:0000211!4.36e-08!60;CL:0000680!6.82e-08!57;CL:0000056!6.82e-08!57;CL:0000355!6.82e-08!57;CL:0000192!1.21e-07!42;CL:0000514!1.21e-07!42;CL:0000359!1.93e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.40e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.37e-09,76;CL:0000187,1.30e-08,55;CL:0000393,1.93e-08,61;CL:0000211,1.93e-08,61;CL:0000680,3.00e-08,58;CL:0000056,3.00e-08,58;CL:0000355,3.00e-08,58;CL:0000192,5.01e-08,43;CL:0000514,5.01e-08,43;CL:0000359,1.92e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.55e-24!365;UBERON:0000481!1.40e-16!347;UBERON:0000483!8.53e-16!309;UBERON:0000119!9.27e-16!312;UBERON:0004111!3.03e-14!241;UBERON:0000477!1.09e-13!286;UBERON:0000025!1.12e-12!194;UBERON:0000468!4.08e-11!659;UBERON:0000924!4.61e-11!173;UBERON:0006601!4.61e-11!173;UBERON:0004121!8.91e-11!169;UBERON:0000914!4.19e-10!83;UBERON:0002329!4.19e-10!83;UBERON:0003077!4.19e-10!83;UBERON:0003059!4.19e-10!83;UBERON:0007282!4.19e-10!83;UBERON:0009618!4.19e-10!83;UBERON:0007285!4.19e-10!83;UBERON:0000033!7.87e-10!123;UBERON:0004290!1.21e-09!70;UBERON:0001134!1.35e-09!61;UBERON:0002036!1.35e-09!61;UBERON:0003082!1.35e-09!61;UBERON:0002346!1.41e-09!90;UBERON:0003075!2.40e-09!86;UBERON:0007284!2.40e-09!86;UBERON:0002385!2.50e-09!63;UBERON:0001015!2.50e-09!63;UBERON:0000383!2.50e-09!63;UBERON:0000153!4.34e-09!129;UBERON:0007811!4.34e-09!129;UBERON:0002100!1.70e-08!216;UBERON:0000486!2.17e-08!82;UBERON:0000073!2.42e-08!94;UBERON:0001016!2.42e-08!94;UBERON:0005743!3.14e-08!86;UBERON:0002616!4.14e-08!59;UBERON:0001049!4.39e-08!57;UBERON:0005068!4.39e-08!57;UBERON:0006241!4.39e-08!57;UBERON:0007135!4.39e-08!57;UBERON:0004872!6.16e-08!84;UBERON:0001017!6.84e-08!82;UBERON:0005256!7.53e-08!143;UBERON:0002049!1.07e-07!79;UBERON:0007798!1.07e-07!79;UBERON:0000480!1.82e-07!626;UBERON:0000955!2.28e-07!69;UBERON:0006238!2.28e-07!69;UBERON:0000467!2.49e-07!625;UBERON:0001981!2.85e-07!60;UBERON:0007500!2.85e-07!60;UBERON:0004537!2.85e-07!60;UBERON:0006965!2.85e-07!60;UBERON:0000055!3.45e-07!69;UBERON:0003102!7.49e-07!95;UBERON:0001637!8.55e-07!42;UBERON:0003509!8.55e-07!42;UBERON:0004572!8.55e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,6.43e-16,306;UBERON:0000119,7.02e-16,309;UBERON:0004111,4.13e-14,240;UBERON:0010314,5.64e-13,132;UBERON:0000025,3.53e-12,192;UBERON:0004121,1.32e-11,171;UBERON:0000924,1.32e-11,171;UBERON:0006601,1.32e-11,171;UBERON:0007524,1.22e-10,73;UBERON:0003077,3.44e-10,72;UBERON:0007285,3.44e-10,72;UBERON:0007503,4.34e-10,78;UBERON:0002329,5.21e-10,71;UBERON:0003059,5.21e-10,71;UBERON:0007282,5.21e-10,71;UBERON:0004290,5.21e-10,71;UBERON:0009618,5.21e-10,71;UBERON:0001134,5.66e-10,62;UBERON:0002036,5.66e-10,62;UBERON:0003082,5.66e-10,62;UBERON:0002385,1.07e-09,64;UBERON:0001015,1.07e-09,64;UBERON:0000383,1.07e-09,64;UBERON:0002346,1.59e-09,86;UBERON:0010371,2.24e-09,104;UBERON:0003104,2.40e-09,160;UBERON:0009142,2.40e-09,160;UBERON:0003075,2.69e-09,82;UBERON:0007284,2.69e-09,82;UBERON:0000486,1.02e-08,83;UBERON:0005256,1.79e-08,122;UBERON:0001049,6.83e-08,56;UBERON:0005068,6.83e-08,56;UBERON:0006241,6.83e-08,56;UBERON:0007135,6.83e-08,56;UBERON:0001016,7.80e-08,89;UBERON:0001017,1.03e-07,81;UBERON:0004872,1.08e-07,83;UBERON:0000073,1.32e-07,53;UBERON:0002616,1.32e-07,53;UBERON:0002049,1.87e-07,78;UBERON:0007798,1.87e-07,78;UBERON:0002100,3.13e-07,199;UBERON:0000955,3.45e-07,68;UBERON:0006238,3.45e-07,68;UBERON:0000923,4.26e-07,560;UBERON:0010316,4.26e-07,560;UBERON:0005291,4.26e-07,560;UBERON:0006598,4.26e-07,560;UBERON:0010317,4.26e-07,560;UBERON:0002532,4.26e-07,560;UBERON:0007500,5.15e-07,59;UBERON:0001981,5.15e-07,59;UBERON:0004537,5.15e-07,59;UBERON:0006965,5.15e-07,59;UBERON:0002050,5.32e-07,564;UBERON:0000490,5.82e-07,148;UBERON:0000055,6.08e-07,68;UBERON:0001637,8.53e-07,42;UBERON:0003509,8.53e-07,42;UBERON:0004572,8.53e-07,42;UBERON:0011216,9.02e-07,223 | |||
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| ||
|short_description=p3@ERCC1 | |||
}} | }} |
Latest revision as of 17:08, 18 September 2015
Short description: | p3@ERCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ERCC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000428893_5end |
EntrezGene: | ERCC1 |
HGNC: | 3433 |
UniProt: | F5GWP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.37e-09 | 76 |
muscle cell | 1.30e-08 | 55 |
electrically responsive cell | 1.93e-08 | 61 |
electrically active cell | 1.93e-08 | 61 |
muscle precursor cell | 3.00e-08 | 58 |
myoblast | 3.00e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.00e-08 | 58 |
smooth muscle cell | 5.01e-08 | 43 |
smooth muscle myoblast | 5.01e-08 | 43 |
vascular associated smooth muscle cell | 1.92e-07 | 32 |