FFCP PHASE1:Hg19::chr17:9725394..9725400,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=A8MUP6 | |UniProt=A8MUP6 | ||
|association_with_transcript=-6bp_to_ENST00000399363_5end | |association_with_transcript=-6bp_to_ENST00000399363_5end | ||
|cluster_id=chr17:9725394..9725400,- | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_1_at_ENST00000399363_5end | |description=CAGE_peak_1_at_ENST00000399363_5end | ||
|id=chr17:9725394..9725400,- | |id=chr17:9725394..9725400,- | ||
|ontology_enrichment_celltype=CL:0000242!7.09e-25!2;CL:0000312!1.54e-10!5;CL:0000095!2.86e-10!17;CL:0000123!2.86e-10!17;CL:0000240!6.26e-09!6;CL:0000311!6.26e-09!6;CL:0000079!6.26e-09!6;CL:0000237!6.26e-09!6;CL:0000036!6.26e-09!6;CL:0000357!6.26e-09!6;CL:0000114!6.26e-09!6;CL:0002319!2.79e-07!25;CL:0000362!6.61e-07!8 | |ontology_enrichment_celltype=CL:0000242!7.09e-25!2;CL:0000312!1.54e-10!5;CL:0000095!2.86e-10!17;CL:0000123!2.86e-10!17;CL:0000240!6.26e-09!6;CL:0000311!6.26e-09!6;CL:0000079!6.26e-09!6;CL:0000237!6.26e-09!6;CL:0000036!6.26e-09!6;CL:0000357!6.26e-09!6;CL:0000114!6.26e-09!6;CL:0002319!2.79e-07!25;CL:0000362!6.61e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.52e-50;2!CL:0000242;4.52e-50;2!CL:0000312;5.15e-21;5!CL:0000240;9.07e-18;6!CL:0000311;9.07e-18;6!CL:0000079;9.07e-18;6!CL:0000237;9.07e-18;6!CL:0000362;2.45e-12;9!CL:0002159;2.00e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.52e-50,2;CL:0000312,5.15e-21,5;CL:0000240,9.07e-18,6;CL:0000311,9.07e-18,6;CL:0000079,9.07e-18,6;CL:0000237,9.07e-18,6;CL:0000036,9.07e-18,6;CL:0000357,9.07e-18,6;CL:0000114,9.07e-18,6;CL:0000362,2.45e-12,9;CL:0002159,2.00e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;9.07e-18;6!CL:0000114;9.07e-18;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;5.56e-26;4!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,5.56e-26,4;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001893!3.59e-20!34;UBERON:0000200!6.31e-18!6;UBERON:0003056!2.17e-17!61;UBERON:0005743!2.19e-17!86;UBERON:0002780!1.11e-16!41;UBERON:0001890!1.11e-16!41;UBERON:0006240!1.11e-16!41;UBERON:0001869!1.69e-16!32;UBERON:0002771!2.20e-16!3;UBERON:0003080!2.82e-16!42;UBERON:0002791!5.62e-16!33;UBERON:0000073!1.25e-15!94;UBERON:0001016!1.25e-15!94;UBERON:0001017!3.00e-15!82;UBERON:0000955!5.12e-15!69;UBERON:0006238!5.12e-15!69;UBERON:0003075!1.09e-14!86;UBERON:0007284!1.09e-14!86;UBERON:0002346!5.59e-14!90;UBERON:0001950!1.04e-13!20;UBERON:0001871!1.27e-13!7;UBERON:0003112!2.32e-13!1;UBERON:0000032!2.32e-13!1;UBERON:0005253!2.32e-13!1;UBERON:0003128!2.32e-13!1;UBERON:0002241!2.32e-13!1;UBERON:0001703!2.32e-13!1;UBERON:0004761!2.32e-13!1;UBERON:0009617!2.32e-13!1;UBERON:0007190!6.82e-13!1;UBERON:0002336!8.64e-13!1;UBERON:0001018!8.64e-13!1;UBERON:0002473!8.64e-13!1;UBERON:0005340!8.64e-13!1;UBERON:0002316!8.64e-13!1;UBERON:0003544!8.64e-13!1;UBERON:0001020!8.64e-13!1;UBERON:0005970!8.64e-13!1;UBERON:0002437!8.64e-13!1;UBERON:0001882!9.73e-13!1;UBERON:0005403!9.73e-13!1;UBERON:0002022!1.09e-12!1;UBERON:0002619!1.63e-12!22;UBERON:0001049!7.40e-12!57;UBERON:0005068!7.40e-12!57;UBERON:0006241!7.40e-12!57;UBERON:0007135!7.40e-12!57;UBERON:0000033!8.86e-12!123;UBERON:0002020!1.61e-11!34;UBERON:0003528!1.61e-11!34;UBERON:0004121!1.94e-11!169;UBERON:0002616!1.96e-11!59;UBERON:0000153!3.65e-11!129;UBERON:0007811!3.65e-11!129;UBERON:0000924!3.90e-11!173;UBERON:0006601!3.90e-11!173;UBERON:0000956!4.59e-11!25;UBERON:0000203!4.59e-11!25;UBERON:0007023!9.17e-11!115;UBERON:0000966!1.86e-10!5;UBERON:0005388!1.86e-10!5;UBERON:0001802!1.86e-10!5;UBERON:0002360!2.91e-07!2;UBERON:0000094!2.91e-07!2;UBERON:0007645!2.91e-07!2;UBERON:0001870!3.48e-07!2;UBERON:0005162!4.98e-07!2;UBERON:0000122!4.98e-07!2 | |ontology_enrichment_uberon=UBERON:0001893!3.59e-20!34;UBERON:0000200!6.31e-18!6;UBERON:0003056!2.17e-17!61;UBERON:0005743!2.19e-17!86;UBERON:0002780!1.11e-16!41;UBERON:0001890!1.11e-16!41;UBERON:0006240!1.11e-16!41;UBERON:0001869!1.69e-16!32;UBERON:0002771!2.20e-16!3;UBERON:0003080!2.82e-16!42;UBERON:0002791!5.62e-16!33;UBERON:0000073!1.25e-15!94;UBERON:0001016!1.25e-15!94;UBERON:0001017!3.00e-15!82;UBERON:0000955!5.12e-15!69;UBERON:0006238!5.12e-15!69;UBERON:0003075!1.09e-14!86;UBERON:0007284!1.09e-14!86;UBERON:0002346!5.59e-14!90;UBERON:0001950!1.04e-13!20;UBERON:0001871!1.27e-13!7;UBERON:0003112!2.32e-13!1;UBERON:0000032!2.32e-13!1;UBERON:0005253!2.32e-13!1;UBERON:0003128!2.32e-13!1;UBERON:0002241!2.32e-13!1;UBERON:0001703!2.32e-13!1;UBERON:0004761!2.32e-13!1;UBERON:0009617!2.32e-13!1;UBERON:0007190!6.82e-13!1;UBERON:0002336!8.64e-13!1;UBERON:0001018!8.64e-13!1;UBERON:0002473!8.64e-13!1;UBERON:0005340!8.64e-13!1;UBERON:0002316!8.64e-13!1;UBERON:0003544!8.64e-13!1;UBERON:0001020!8.64e-13!1;UBERON:0005970!8.64e-13!1;UBERON:0002437!8.64e-13!1;UBERON:0001882!9.73e-13!1;UBERON:0005403!9.73e-13!1;UBERON:0002022!1.09e-12!1;UBERON:0002619!1.63e-12!22;UBERON:0001049!7.40e-12!57;UBERON:0005068!7.40e-12!57;UBERON:0006241!7.40e-12!57;UBERON:0007135!7.40e-12!57;UBERON:0000033!8.86e-12!123;UBERON:0002020!1.61e-11!34;UBERON:0003528!1.61e-11!34;UBERON:0004121!1.94e-11!169;UBERON:0002616!1.96e-11!59;UBERON:0000153!3.65e-11!129;UBERON:0007811!3.65e-11!129;UBERON:0000924!3.90e-11!173;UBERON:0006601!3.90e-11!173;UBERON:0000956!4.59e-11!25;UBERON:0000203!4.59e-11!25;UBERON:0007023!9.17e-11!115;UBERON:0000966!1.86e-10!5;UBERON:0005388!1.86e-10!5;UBERON:0001802!1.86e-10!5;UBERON:0002360!2.91e-07!2;UBERON:0000094!2.91e-07!2;UBERON:0007645!2.91e-07!2;UBERON:0001870!3.48e-07!2;UBERON:0005162!4.98e-07!2;UBERON:0000122!4.98e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0,0,0,0,2.81000943484129,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428859265059938,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49702583727146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0,0,0,0,2.81000943484129,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428859265059938,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49702583727146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000399363 | |short_description=p1@ENST00000399363 | ||
}} | }} |
Latest revision as of 17:04, 18 September 2015
Short description: | p1@ENST00000399363 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000399363_5end |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | -6bp_to_ENST00000399363_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.52e-50 | 2 |
keratinocyte | 5.15e-21 | 5 |
stratified squamous epithelial cell | 9.07e-18 | 6 |
keratin accumulating cell | 9.07e-18 | 6 |
stratified epithelial cell | 9.07e-18 | 6 |
keratinizing barrier epithelial cell | 9.07e-18 | 6 |
epithelial fate stem cell | 9.07e-18 | 6 |
stratified epithelial stem cell | 9.07e-18 | 6 |
surface ectodermal cell | 9.07e-18 | 6 |
epidermal cell | 2.45e-12 | 9 |
general ecto-epithelial cell | 2.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 5.56e-26 | 4 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |