FFCP PHASE1:Hg19::chr3:49506374..49506387,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1605 | |EntrezGene=1605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2666 | |HGNC=2666 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=228bp_to_ENST00000469139,ENST00000515359_5end | |association_with_transcript=228bp_to_ENST00000469139,ENST00000515359_5end | ||
|cluster_id=chr3:49506374..49506387,+ | |||
|coexpression_cluster_id=C2478 | |||
|description=CAGE_peak_15_at_DAG1_5end | |description=CAGE_peak_15_at_DAG1_5end | ||
|id=chr3:49506374..49506387,+ | |id=chr3:49506374..49506387,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.02e-15!7;CL:0000586!2.02e-15!7;CL:0002541!1.39e-07!3;CL:0000077!4.87e-07!19;CL:0002150!9.07e-07!3;CL:0000861!9.07e-07!3 | |ontology_enrichment_celltype=CL:0000039!2.02e-15!7;CL:0000586!2.02e-15!7;CL:0002541!1.39e-07!3;CL:0000077!4.87e-07!19;CL:0002150!9.07e-07!3;CL:0000861!9.07e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.23e-55;7!CL:0000586;9.23e-55;7!CL:0002541;1.17e-21;3!CL:0002262;7.21e-09;2!CL:1000398;7.21e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.62e-55,7;CL:0000586,6.62e-55,7;CL:0002541,1.17e-21,3;CL:0002262,7.49e-09,2;CL:1000398,7.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.34e-14;10!UBERON:0005564;1.34e-14;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.03e-14!143;DOID:305!3.65e-13!106;DOID:162!4.97e-10!235;DOID:3095!1.07e-09!22;DOID:2994!1.07e-09!22;DOID:14566!1.51e-09!239 | |ontology_enrichment_disease=DOID:0050687!1.03e-14!143;DOID:305!3.65e-13!106;DOID:162!4.97e-10!235;DOID:3095!1.07e-09!22;DOID:2994!1.07e-09!22;DOID:14566!1.51e-09!239 | ||
|ontology_enrichment_disease_v019=DOID:3095;7.24e-25;22!DOID:2994;7.24e-25;22!DOID:178;1.12e-16;1!DOID:326;1.12e-16;1!DOID:3978;1.12e-16;1!DOID:3394;1.12e-16;1!DOID:5844;1.12e-16;1!DOID:1799;2.08e-16;1!DOID:10165;2.08e-16;1!DOID:1798;2.08e-16;1!DOID:114;5.28e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.09e-25,22;DOID:2994,7.09e-25,22;DOID:178,1.21e-16,1;DOID:326,1.21e-16,1;DOID:3978,1.21e-16,1;DOID:3394,1.21e-16,1;DOID:5844,1.21e-16,1;DOID:1799,1.93e-16,1;DOID:10165,1.93e-16,1;DOID:1798,1.93e-16,1;DOID:114,5.49e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.53e-11!14;UBERON:0000158!5.53e-11!14;UBERON:0000473!4.49e-09!8;UBERON:0000476!1.39e-07!3;UBERON:0000920!1.39e-07!3;UBERON:0000305!2.62e-07!7;UBERON:0001737!3.15e-07!9 | |ontology_enrichment_uberon=UBERON:0005631!5.53e-11!14;UBERON:0000158!5.53e-11!14;UBERON:0000473!4.49e-09!8;UBERON:0000476!1.39e-07!3;UBERON:0000920!1.39e-07!3;UBERON:0000305!2.62e-07!7;UBERON:0001737!3.15e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.17e-21;3!UBERON:0000920;1.17e-21;3!UBERON:0000473;4.42e-18;8!UBERON:0003135;2.50e-13;11!UBERON:0001281;7.21e-09;2!UBERON:0003497;7.21e-09;2!UBERON:0003909;7.21e-09;2!UBERON:0003835;7.21e-09;2!UBERON:0000991;3.01e-07;21!UBERON:0005631;3.77e-07;10!UBERON:0000158;3.77e-07;10!UBERON:0003101;6.10e-07;22!UBERON:0000079;6.10e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.17e-21,3;UBERON:0000473,4.18e-18,8;UBERON:0003135,2.39e-13,11;UBERON:0003124,7.64e-10,7;UBERON:0001281,7.49e-09,2;UBERON:0003497,7.49e-09,2;UBERON:0003909,7.49e-09,2;UBERON:0003835,7.49e-09,2;UBERON:0000991,2.95e-07,21;UBERON:0009196,2.95e-07,21;UBERON:0009117,2.95e-07,21;UBERON:0005564,2.95e-07,21;UBERON:0004176,5.98e-07,22;UBERON:0003101,5.98e-07,22;UBERON:0000079,5.98e-07,22 | |||
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| ||
|short_description=p15@DAG1 | |short_description=p15@DAG1 | ||
}} | }} |
Latest revision as of 17:00, 18 September 2015
Short description: | p15@DAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_DAG1_5end |
Coexpression cluster: | C2478_testicular_chorionic_placenta_anaplastic_amniotic_choriocarcinoma_Placental |
Association with transcript: | 228bp_to_ENST00000469139, ENST00000515359_5end |
EntrezGene: | DAG1 |
HGNC: | 2666 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.62e-55 | 7 |
germ cell | 6.62e-55 | 7 |
chorionic membrane mesenchymal stem cell | 1.17e-21 | 3 |
endothelial cell of sinusoid | 7.49e-09 | 2 |
endothelial cell of hepatic sinusoid | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.17e-21 | 3 |
testis | 4.18e-18 | 8 |
male reproductive organ | 2.39e-13 | 11 |
chorion | 7.64e-10 | 7 |
hepatic sinusoid | 7.49e-09 | 2 |
abdomen blood vessel | 7.49e-09 | 2 |
sinusoid | 7.49e-09 | 2 |
abdominal segment blood vessel | 7.49e-09 | 2 |
gonad | 2.95e-07 | 21 |
indifferent external genitalia | 2.95e-07 | 21 |
indifferent gonad | 2.95e-07 | 21 |
gonad primordium | 2.95e-07 | 21 |
external genitalia | 5.98e-07 | 22 |
male organism | 5.98e-07 | 22 |
male reproductive system | 5.98e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.09e-25 | 22 |
germ cell cancer | 7.09e-25 | 22 |
vascular disease | 1.21e-16 | 1 |
ischemia | 1.21e-16 | 1 |
extrinsic cardiomyopathy | 1.21e-16 | 1 |
myocardial ischemia | 1.21e-16 | 1 |
myocardial infarction | 1.21e-16 | 1 |
islet cell tumor | 1.93e-16 | 1 |
endocrine pancreas cancer | 1.93e-16 | 1 |
pancreatic endocrine carcinoma | 1.93e-16 | 1 |
heart disease | 5.49e-09 | 2 |