FFCP PHASE1:Hg19::chr12:50135941..50135973,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7009 | |EntrezGene=7009 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11723 | |HGNC=11723 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=347bp_to_ENST00000542631,uc001ruz.2_5end | |association_with_transcript=347bp_to_ENST00000542631,uc001ruz.2_5end | ||
|cluster_id=chr12:50135941..50135973,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_9_at_TMBIM6_5end | |description=CAGE_peak_9_at_TMBIM6_5end | ||
|id=chr12:50135941..50135973,+ | |id=chr12:50135941..50135973,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.95e-12!45;CL:0000012!6.16e-12!682;CL:0002057!8.83e-12!42;CL:0000548!2.24e-11!679;CL:0000004!2.24e-11!679;CL:0000255!2.24e-11!679;CL:0000048!1.20e-10!430;CL:0000723!7.49e-10!436;CL:0000839!2.49e-09!70;CL:0000144!2.56e-09!625;CL:0000034!3.08e-09!444;CL:0000557!4.71e-09!71;CL:0000766!6.97e-09!76;CL:0002371!4.06e-08!591;CL:0000134!4.94e-08!358;CL:0000063!7.46e-08!578;CL:0000763!7.98e-08!112;CL:0000049!7.98e-08!112;CL:0002194!1.46e-07!63;CL:0000576!1.46e-07!63;CL:0000040!1.46e-07!63;CL:0000559!1.46e-07!63;CL:0002320!1.93e-07!365;CL:0002009!1.95e-07!65 | |ontology_enrichment_celltype=CL:0000860!4.95e-12!45;CL:0000012!6.16e-12!682;CL:0002057!8.83e-12!42;CL:0000548!2.24e-11!679;CL:0000004!2.24e-11!679;CL:0000255!2.24e-11!679;CL:0000048!1.20e-10!430;CL:0000723!7.49e-10!436;CL:0000839!2.49e-09!70;CL:0000144!2.56e-09!625;CL:0000034!3.08e-09!444;CL:0000557!4.71e-09!71;CL:0000766!6.97e-09!76;CL:0002371!4.06e-08!591;CL:0000134!4.94e-08!358;CL:0000063!7.46e-08!578;CL:0000763!7.98e-08!112;CL:0000049!7.98e-08!112;CL:0002194!1.46e-07!63;CL:0000576!1.46e-07!63;CL:0000040!1.46e-07!63;CL:0000559!1.46e-07!63;CL:0002320!1.93e-07!365;CL:0002009!1.95e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.42e-19;33!CL:0002057;4.42e-19;33!CL:0000473;1.13e-12;39!CL:0000234;1.13e-12;39!CL:0000576;6.60e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.60e-15,42;CL:0002057,8.60e-15,42;CL:0000473,2.98e-12,48;CL:0000234,2.98e-12,48;CL:0000766,4.65e-12,72;CL:0000557,1.34e-11,67;CL:0000839,3.38e-11,66;CL:0000763,9.77e-10,108;CL:0000049,9.77e-10,108;CL:0002009,1.21e-09,61;CL:0002194,1.73e-09,59;CL:0000576,1.73e-09,59;CL:0000040,1.73e-09,59;CL:0000559,1.73e-09,59;CL:0000048,5.54e-09,427;CL:0000134,1.32e-08,354;CL:0000723,2.51e-08,433;CL:0000034,3.59e-08,441;CL:0002320,8.15e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;5.32e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.86e-10!86;UBERON:0002405!1.03e-09!115;UBERON:0000926!2.91e-09!448;UBERON:0004120!2.91e-09!448;UBERON:0006603!2.91e-09!448;UBERON:0000055!7.38e-09!69;UBERON:0002204!1.06e-08!167;UBERON:0001981!1.53e-08!60;UBERON:0007500!1.53e-08!60;UBERON:0004537!1.53e-08!60;UBERON:0006965!1.53e-08!60;UBERON:0002371!2.16e-08!80;UBERON:0004765!3.21e-08!101;UBERON:0001434!3.21e-08!101;UBERON:0001637!5.42e-08!42;UBERON:0003509!5.42e-08!42;UBERON:0004572!5.42e-08!42;UBERON:0003914!5.48e-08!118;UBERON:0002384!3.16e-07!375 | |ontology_enrichment_uberon=UBERON:0001474!7.86e-10!86;UBERON:0002405!1.03e-09!115;UBERON:0000926!2.91e-09!448;UBERON:0004120!2.91e-09!448;UBERON:0006603!2.91e-09!448;UBERON:0000055!7.38e-09!69;UBERON:0002204!1.06e-08!167;UBERON:0001981!1.53e-08!60;UBERON:0007500!1.53e-08!60;UBERON:0004537!1.53e-08!60;UBERON:0006965!1.53e-08!60;UBERON:0002371!2.16e-08!80;UBERON:0004765!3.21e-08!101;UBERON:0001434!3.21e-08!101;UBERON:0001637!5.42e-08!42;UBERON:0003509!5.42e-08!42;UBERON:0004572!5.42e-08!42;UBERON:0003914!5.48e-08!118;UBERON:0002384!3.16e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.11e-07;42!UBERON:0003509;9.11e-07;42!UBERON:0004572;9.11e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.41e-11,82;UBERON:0002371,2.15e-10,76;UBERON:0003081,4.41e-10,203;UBERON:0004765,3.03e-09,90;UBERON:0001637,1.16e-08,42;UBERON:0003509,1.16e-08,42;UBERON:0004572,1.16e-08,42;UBERON:0001434,2.92e-08,100;UBERON:0007500,7.12e-08,59;UBERON:0001981,7.12e-08,59;UBERON:0004537,7.12e-08,59;UBERON:0006965,7.12e-08,59;UBERON:0002384,7.22e-08,371;UBERON:0002405,1.30e-07,93;UBERON:0004573,2.21e-07,33;UBERON:0004571,2.21e-07,33;UBERON:0002390,2.34e-07,98;UBERON:0003061,2.34e-07,98;UBERON:0002204,2.80e-07,167;UBERON:0000926,4.38e-07,315;UBERON:0004120,4.38e-07,315;UBERON:0006603,4.38e-07,315 | |||
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| ||
|short_description=p9@TMBIM6 | |short_description=p9@TMBIM6 | ||
}} | }} |
Latest revision as of 17:00, 18 September 2015
Short description: | p9@TMBIM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TMBIM6_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 347bp_to_ENST00000542631, uc001ruz.2_5end |
EntrezGene: | TMBIM6 |
HGNC: | 11723 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.60e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.60e-15 | 42 |
defensive cell | 2.98e-12 | 48 |
phagocyte | 2.98e-12 | 48 |
myeloid leukocyte | 4.65e-12 | 72 |
granulocyte monocyte progenitor cell | 1.34e-11 | 67 |
myeloid lineage restricted progenitor cell | 3.38e-11 | 66 |
myeloid cell | 9.77e-10 | 108 |
common myeloid progenitor | 9.77e-10 | 108 |
macrophage dendritic cell progenitor | 1.21e-09 | 61 |
monopoietic cell | 1.73e-09 | 59 |
monocyte | 1.73e-09 | 59 |
monoblast | 1.73e-09 | 59 |
promonocyte | 1.73e-09 | 59 |
multi fate stem cell | 5.54e-09 | 427 |
mesenchymal cell | 1.32e-08 | 354 |
somatic stem cell | 2.51e-08 | 433 |
stem cell | 3.59e-08 | 441 |
connective tissue cell | 8.15e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.41e-11 | 82 |
bone marrow | 2.15e-10 | 76 |
lateral plate mesoderm | 4.41e-10 | 203 |
skeletal element | 3.03e-09 | 90 |
artery | 1.16e-08 | 42 |
arterial blood vessel | 1.16e-08 | 42 |
arterial system | 1.16e-08 | 42 |
skeletal system | 2.92e-08 | 100 |
epithelial tube open at both ends | 7.12e-08 | 59 |
blood vessel | 7.12e-08 | 59 |
blood vasculature | 7.12e-08 | 59 |
vascular cord | 7.12e-08 | 59 |
connective tissue | 7.22e-08 | 371 |
immune system | 1.30e-07 | 93 |
systemic artery | 2.21e-07 | 33 |
systemic arterial system | 2.21e-07 | 33 |
hematopoietic system | 2.34e-07 | 98 |
blood island | 2.34e-07 | 98 |
musculoskeletal system | 2.80e-07 | 167 |
mesoderm | 4.38e-07 | 315 |
mesoderm-derived structure | 4.38e-07 | 315 |
presumptive mesoderm | 4.38e-07 | 315 |