FFCP PHASE1:Hg19::chr12:50135638..50135673,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7009 | |EntrezGene=7009 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11723 | |HGNC=11723 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVJ4 | |UniProt=F8VVJ4 | ||
|association_with_transcript=33bp_to_ENST00000550445_5end | |association_with_transcript=33bp_to_ENST00000550445_5end | ||
|cluster_id=chr12:50135638..50135673,+ | |||
|description=CAGE_peak_5_at_TMBIM6_5end | |description=CAGE_peak_5_at_TMBIM6_5end | ||
|id=chr12:50135638..50135673,+ | |id=chr12:50135638..50135673,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.67e-14!94;UBERON:0001016!2.67e-14!94;UBERON:0001017!1.16e-13!82;UBERON:0005743!1.67e-13!86;UBERON:0001049!8.24e-11!57;UBERON:0005068!8.24e-11!57;UBERON:0006241!8.24e-11!57;UBERON:0007135!8.24e-11!57;UBERON:0000955!1.98e-10!69;UBERON:0006238!1.98e-10!69;UBERON:0002616!5.68e-10!59;UBERON:0001869!3.55e-09!32;UBERON:0001893!4.39e-09!34;UBERON:0002020!5.98e-09!34;UBERON:0003528!5.98e-09!34;UBERON:0002791!1.28e-08!33;UBERON:0002619!1.09e-07!22;UBERON:0002780!1.48e-07!41;UBERON:0001890!1.48e-07!41;UBERON:0006240!1.48e-07!41;UBERON:0003080!3.30e-07!42;UBERON:0003075!3.85e-07!86;UBERON:0007284!3.85e-07!86;UBERON:0001950!5.65e-07!20 | |ontology_enrichment_uberon=UBERON:0000073!2.67e-14!94;UBERON:0001016!2.67e-14!94;UBERON:0001017!1.16e-13!82;UBERON:0005743!1.67e-13!86;UBERON:0001049!8.24e-11!57;UBERON:0005068!8.24e-11!57;UBERON:0006241!8.24e-11!57;UBERON:0007135!8.24e-11!57;UBERON:0000955!1.98e-10!69;UBERON:0006238!1.98e-10!69;UBERON:0002616!5.68e-10!59;UBERON:0001869!3.55e-09!32;UBERON:0001893!4.39e-09!34;UBERON:0002020!5.98e-09!34;UBERON:0003528!5.98e-09!34;UBERON:0002791!1.28e-08!33;UBERON:0002619!1.09e-07!22;UBERON:0002780!1.48e-07!41;UBERON:0001890!1.48e-07!41;UBERON:0006240!1.48e-07!41;UBERON:0003080!3.30e-07!42;UBERON:0003075!3.85e-07!86;UBERON:0007284!3.85e-07!86;UBERON:0001950!5.65e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.01e-09;34!UBERON:0001869;2.36e-09;32!UBERON:0002791;6.75e-09;32!UBERON:0003528;9.39e-09;34!UBERON:0002020;9.39e-09;34!UBERON:0002619;3.00e-08;22!UBERON:0001950;1.10e-07;20!UBERON:0000956;2.14e-07;25!UBERON:0000203;2.14e-07;25!UBERON:0002780;7.09e-07;41!UBERON:0001890;7.09e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0001893;2.01e-09;34!UBERON:0001869;2.36e-09;32!UBERON:0002791;6.75e-09;32!UBERON:0003528;9.39e-09;34!UBERON:0002020;9.39e-09;34!UBERON:0002619;3.00e-08;22!UBERON:0001950;1.10e-07;20!UBERON:0000956;2.14e-07;25!UBERON:0000203;2.14e-07;25!UBERON:0002780;7.09e-07;41!UBERON:0001890;7.09e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.38e-16,89;UBERON:0001017,5.02e-15,81;UBERON:0001049,4.83e-12,56;UBERON:0005068,4.83e-12,56;UBERON:0006241,4.83e-12,56;UBERON:0007135,4.83e-12,56;UBERON:0000955,1.89e-11,68;UBERON:0006238,1.89e-11,68;UBERON:0000073,3.90e-11,53;UBERON:0002616,3.90e-11,53;UBERON:0001869,9.93e-10,32;UBERON:0001893,1.23e-09,34;UBERON:0003528,1.72e-09,34;UBERON:0002020,1.72e-09,34;UBERON:0002791,6.34e-09,32;UBERON:0003075,1.27e-08,82;UBERON:0007284,1.27e-08,82;UBERON:0002619,2.30e-08,22;UBERON:0002780,2.78e-08,41;UBERON:0001890,2.78e-08,41;UBERON:0003080,2.78e-08,41;UBERON:0006240,2.78e-08,41;UBERON:0002346,2.93e-08,86;UBERON:0001950,1.40e-07,20;UBERON:0000956,3.11e-07,25;UBERON:0000203,3.11e-07,25 | |||
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| ||
|short_description=p5@TMBIM6 | |short_description=p5@TMBIM6 | ||
}} | }} |
Latest revision as of 17:00, 18 September 2015
Short description: | p5@TMBIM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMBIM6_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000550445_5end |
EntrezGene: | TMBIM6 |
HGNC: | 11723 |
UniProt: | F8VVJ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 8.38e-16 | 89 |
central nervous system | 5.02e-15 | 81 |
neural tube | 4.83e-12 | 56 |
neural rod | 4.83e-12 | 56 |
future spinal cord | 4.83e-12 | 56 |
neural keel | 4.83e-12 | 56 |
brain | 1.89e-11 | 68 |
future brain | 1.89e-11 | 68 |
regional part of nervous system | 3.90e-11 | 53 |
regional part of brain | 3.90e-11 | 53 |
cerebral hemisphere | 9.93e-10 | 32 |
telencephalon | 1.23e-09 | 34 |
brain grey matter | 1.72e-09 | 34 |
gray matter | 1.72e-09 | 34 |
regional part of telencephalon | 6.34e-09 | 32 |
neural plate | 1.27e-08 | 82 |
presumptive neural plate | 1.27e-08 | 82 |
regional part of cerebral cortex | 2.30e-08 | 22 |
regional part of forebrain | 2.78e-08 | 41 |
forebrain | 2.78e-08 | 41 |
anterior neural tube | 2.78e-08 | 41 |
future forebrain | 2.78e-08 | 41 |
neurectoderm | 2.93e-08 | 86 |
neocortex | 1.40e-07 | 20 |
cerebral cortex | 3.11e-07 | 25 |
pallium | 3.11e-07 | 25 |