FFCP PHASE1:Hg19::chr15:67357992..67358009,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4088 | |EntrezGene=4088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6769 | |HGNC=6769 | ||
|TSSclassifier=strong | |||
|UniProt=P84022 | |UniProt=P84022 | ||
|association_with_transcript=-173bp_to_ENST00000327367,ENST00000535241_5end | |association_with_transcript=-173bp_to_ENST00000327367,ENST00000535241_5end | ||
|cluster_id=chr15:67357992..67358009,+ | |||
|description=CAGE_peak_3_at_SMAD3_5end | |description=CAGE_peak_3_at_SMAD3_5end | ||
|id=chr15:67357992..67358009,+ | |id=chr15:67357992..67358009,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.41e-07!24;CL:0000826!2.41e-07!24 | |ontology_enrichment_celltype=CL:0000945!2.41e-07!24;CL:0000826!2.41e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.05e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.95e-08,24;CL:0000826,6.95e-08,24;CL:0000236,8.71e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.36e-10!61;UBERON:0002346!2.65e-10!90;UBERON:0003075!2.74e-10!86;UBERON:0007284!2.74e-10!86;UBERON:0007023!6.79e-09!115;UBERON:0000153!1.42e-08!129;UBERON:0007811!1.42e-08!129;UBERON:0000033!7.21e-08!123;UBERON:0003080!3.66e-07!42;UBERON:0002780!9.79e-07!41;UBERON:0001890!9.79e-07!41;UBERON:0006240!9.79e-07!41 | |ontology_enrichment_uberon=UBERON:0003056!1.36e-10!61;UBERON:0002346!2.65e-10!90;UBERON:0003075!2.74e-10!86;UBERON:0007284!2.74e-10!86;UBERON:0007023!6.79e-09!115;UBERON:0000153!1.42e-08!129;UBERON:0007811!1.42e-08!129;UBERON:0000033!7.21e-08!123;UBERON:0003080!3.66e-07!42;UBERON:0002780!9.79e-07!41;UBERON:0001890!9.79e-07!41;UBERON:0006240!9.79e-07!41 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.38e-09,61;UBERON:0003075,2.48e-09,82;UBERON:0007284,2.48e-09,82;UBERON:0002346,2.71e-09,86;UBERON:0007023,1.05e-08,114 | |||
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| ||
|short_description=p3@SMAD3 | |short_description=p3@SMAD3 | ||
}} | }} |
Latest revision as of 16:56, 18 September 2015
Short description: | p3@SMAD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMAD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -173bp_to_ENST00000327367, ENST00000535241_5end |
EntrezGene: | SMAD3 |
HGNC: | 6769 |
UniProt: | P84022 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.95e-08 | 24 |
pro-B cell | 6.95e-08 | 24 |
B cell | 8.71e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 1.38e-09 | 61 |
neural plate | 2.48e-09 | 82 |
presumptive neural plate | 2.48e-09 | 82 |
neurectoderm | 2.71e-09 | 86 |
adult organism | 1.05e-08 | 114 |