FFCP PHASE1:Hg19::chr19:45843994..45844015,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147700 | |EntrezGene=147700 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20717 | |HGNC=20717 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P597 | |UniProt=Q6P597 | ||
|association_with_transcript=0bp_to_ENST00000391946,ENST00000494686,NM_177417,uc002pbe.2,uc002pbf.1,uc010ejy.1_5end | |association_with_transcript=0bp_to_ENST00000391946,ENST00000494686,NM_177417,uc002pbe.2,uc002pbf.1,uc010ejy.1_5end | ||
|cluster_id=chr19:45843994..45844015,+ | |||
|coexpression_cluster_id=C511 | |coexpression_cluster_id=C511 | ||
|description=CAGE_peak_1_at_KLC3_5end | |description=CAGE_peak_1_at_KLC3_5end | ||
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|ontology_enrichment_celltype=CL:0000066!7.52e-39!254;CL:0002076!6.48e-24!43;CL:0000223!3.43e-18!59;CL:0002368!3.64e-11!13;CL:0002251!1.11e-10!21;CL:0002202!4.62e-08!9;CL:0002632!4.62e-08!9;CL:0000076!2.28e-07!62;CL:0002159!6.98e-07!13 | |ontology_enrichment_celltype=CL:0000066!7.52e-39!254;CL:0002076!6.48e-24!43;CL:0000223!3.43e-18!59;CL:0002368!3.64e-11!13;CL:0002251!1.11e-10!21;CL:0002202!4.62e-08!9;CL:0002632!4.62e-08!9;CL:0000076!2.28e-07!62;CL:0002159!6.98e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.24e-21;42!CL:0002368;8.42e-15;13!CL:0002251;1.14e-11;20!CL:0002202;4.77e-10;9!CL:0002632;4.77e-10;9!CL:0002159;9.71e-10;14!CL:0000244;3.15e-07;4!CL:0000731;3.15e-07;4 | |ontology_enrichment_celltype_v019=CL:0002076;1.24e-21;42!CL:0002368;8.42e-15;13!CL:0002251;1.14e-11;20!CL:0002202;4.77e-10;9!CL:0002632;4.77e-10;9!CL:0002159;9.71e-10;14!CL:0000244;3.15e-07;4!CL:0000731;3.15e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.13e-39,253;CL:0002076,4.27e-29,42;CL:0000223,2.25e-20,58;CL:0002368,8.07e-15,13;CL:0002251,1.04e-11,20;CL:0002202,4.54e-10,9;CL:0002632,4.54e-10,9;CL:0002159,9.99e-10,14;CL:0000076,1.96e-08,63;CL:0000244,3.12e-07,4;CL:0000731,3.12e-07,4;CL:0002077,3.87e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000223;1.45e-11;58 | |ontology_enrichment_development_v019=CL:0000223;1.45e-11;58 | ||
|ontology_enrichment_disease=DOID:305!4.05e-20!106;DOID:0050687!7.41e-17!143;DOID:1749!1.76e-10!14;DOID:299!1.32e-09!25;DOID:162!6.35e-09!235;DOID:14566!3.53e-08!239 | |ontology_enrichment_disease=DOID:305!4.05e-20!106;DOID:0050687!7.41e-17!143;DOID:1749!1.76e-10!14;DOID:299!1.32e-09!25;DOID:162!6.35e-09!235;DOID:14566!3.53e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.08e-12;14 | |ontology_enrichment_disease_v019=DOID:1749;3.08e-12;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.70e-13,106;DOID:1749,3.40e-12,14;DOID:0050687,7.42e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.87e-16!169;UBERON:0000925!9.87e-16!169;UBERON:0006595!9.87e-16!169;UBERON:0001004!6.53e-15!72;UBERON:0000065!3.96e-11!53;UBERON:0006554!7.34e-11!44;UBERON:0000464!1.14e-10!104;UBERON:0001008!2.27e-10!45;UBERON:0000077!3.57e-10!130;UBERON:0001007!6.21e-10!155;UBERON:0001555!6.21e-10!155;UBERON:0007026!6.21e-10!155;UBERON:0000072!7.43e-09!46;UBERON:0005153!7.80e-09!37;UBERON:0004921!1.07e-08!129;UBERON:0004185!1.07e-08!129;UBERON:0005911!1.71e-08!82;UBERON:0005157!1.75e-08!51;UBERON:0000466!2.08e-08!126;UBERON:0008947!2.44e-08!38;UBERON:0003258!2.44e-08!38;UBERON:0005156!2.79e-08!59;UBERON:0000990!2.79e-08!59;UBERON:0000161!3.93e-08!35;UBERON:0005178!4.02e-08!34;UBERON:0002224!4.02e-08!34;UBERON:0005177!4.38e-08!107;UBERON:0001041!6.89e-08!98;UBERON:0005181!1.16e-07!35;UBERON:0000166!1.93e-07!21;UBERON:0000064!3.49e-07!219;UBERON:0000344!3.76e-07!12;UBERON:0003133!7.36e-07!48;UBERON:0002113!7.49e-07!27;UBERON:0003918!7.49e-07!27;UBERON:0005095!7.49e-07!27;UBERON:0007687!7.49e-07!27;UBERON:0007196!8.36e-07!14;UBERON:0001558!8.36e-07!14;UBERON:0005795!9.40e-07!22 | |ontology_enrichment_uberon=UBERON:0004119!9.87e-16!169;UBERON:0000925!9.87e-16!169;UBERON:0006595!9.87e-16!169;UBERON:0001004!6.53e-15!72;UBERON:0000065!3.96e-11!53;UBERON:0006554!7.34e-11!44;UBERON:0000464!1.14e-10!104;UBERON:0001008!2.27e-10!45;UBERON:0000077!3.57e-10!130;UBERON:0001007!6.21e-10!155;UBERON:0001555!6.21e-10!155;UBERON:0007026!6.21e-10!155;UBERON:0000072!7.43e-09!46;UBERON:0005153!7.80e-09!37;UBERON:0004921!1.07e-08!129;UBERON:0004185!1.07e-08!129;UBERON:0005911!1.71e-08!82;UBERON:0005157!1.75e-08!51;UBERON:0000466!2.08e-08!126;UBERON:0008947!2.44e-08!38;UBERON:0003258!2.44e-08!38;UBERON:0005156!2.79e-08!59;UBERON:0000990!2.79e-08!59;UBERON:0000161!3.93e-08!35;UBERON:0005178!4.02e-08!34;UBERON:0002224!4.02e-08!34;UBERON:0005177!4.38e-08!107;UBERON:0001041!6.89e-08!98;UBERON:0005181!1.16e-07!35;UBERON:0000166!1.93e-07!21;UBERON:0000064!3.49e-07!219;UBERON:0000344!3.76e-07!12;UBERON:0003133!7.36e-07!48;UBERON:0002113!7.49e-07!27;UBERON:0003918!7.49e-07!27;UBERON:0005095!7.49e-07!27;UBERON:0007687!7.49e-07!27;UBERON:0007196!8.36e-07!14;UBERON:0001558!8.36e-07!14;UBERON:0005795!9.40e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.29e-09;30!UBERON:0001008;4.29e-09;30!UBERON:0005910;8.42e-09;6!UBERON:0005911;8.45e-09;36!UBERON:0000486;8.91e-09;12!UBERON:0000344;1.69e-08;20!UBERON:0000365;3.23e-08;5!UBERON:0000161;7.04e-08;19!UBERON:0000166;7.04e-08;19!UBERON:0000165;1.49e-07;28!UBERON:0004807;8.01e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0006554;4.29e-09;30!UBERON:0001008;4.29e-09;30!UBERON:0005910;8.42e-09;6!UBERON:0005911;8.45e-09;36!UBERON:0000486;8.91e-09;12!UBERON:0000344;1.69e-08;20!UBERON:0000365;3.23e-08;5!UBERON:0000161;7.04e-08;19!UBERON:0000166;7.04e-08;19!UBERON:0000165;1.49e-07;28!UBERON:0004807;8.01e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.54e-13,160;UBERON:0000925,3.54e-13,160;UBERON:0006595,3.54e-13,160;UBERON:0006554,1.58e-12,47;UBERON:0001008,4.20e-12,48;UBERON:0001004,4.75e-10,74;UBERON:0000161,6.22e-10,36;UBERON:0000166,4.98e-09,22;UBERON:0005910,8.75e-09,6;UBERON:0000344,1.52e-08,20;UBERON:0000033,2.41e-08,56;UBERON:0000365,3.33e-08,5;UBERON:0000153,1.19e-07,62;UBERON:0007811,1.19e-07,62;UBERON:0001007,2.04e-07,145;UBERON:0001555,2.04e-07,145;UBERON:0007026,2.04e-07,145;UBERON:0005631,2.12e-07,14;UBERON:0000158,2.12e-07,14;UBERON:0005911,3.00e-07,82;UBERON:0000165,4.05e-07,29;UBERON:0000930,4.05e-07,29;UBERON:0005153,8.76e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,5.89761447603621,27.9120467188971,6.11635841964482,12.3970479767373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,18.3884244895785,18.9759728830298,14.7901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.785874452986276,39.3438911355946,30.7751087511076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,21.3686085549842,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,16.8136942252068,8.45512973831587,10.3249654340041,2.5614478287215,1.06023814657188,3.137236457477,2.798848485415,2.77552935963191,0.72995471815166,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.330881918197182,0.435758888184812,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,3.07471096357784,0.171567810298526,16.0235416696593,28.1004383144049,26.0370038546124,15.3696818963159,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,6.56136837907439,12.0947132303179,21.6915898780851,8.68717670217628,9.88155390947471,36.4213545206951,0,0,0.207328115540772,0.432359860250884,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,18.1876542867756,8.32177197552485,9.97887967987945,0,0,0,0,0,0,0,0,0,0,0,0,9.30617761855491,10.4263364557708,11.9705285616665,0,0,0.131124414959424,2.25599806453706,2.23344477602803,0.784349769176855,1.46139224653261,0.527758144464379,0,0,0,0,1.08378575017541,2.00675909541941,3.05851527654046,6.64860807142979,0.895499018888713,7.89335555925364,8.62736988382172,1.28225062558195,1.64007322849853,0.650756789328606,0.206082023295445,0.366277859273374,0.247528499761764,10.9110452219273,7.15066270640173,0,0,0,0,0,0,0,0,0,9.0906703448538,10.7626437724459,7.91198817466422,11.1273558941105,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,12.9899852179441,16.0872546128589,16.3336477291984,0.0941438007767792,20.2337525155478,25.2707213501438,26.6058092122005,16.5400848149011,8.11916174771471,5.35246044999663,4.5571774973933,0.714695326373367,2.05681136543097,7.13320642311989,8.10047155857172,13.4831279970026,1.06824071127473,0,7.84128691139301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0.284136146806413,23.874448473769,8.01804638248124,35.0163200393125,0,0,0,0,3.3780065300479,0.398495976502139,0,0.251932747854276,0.306806047506464,0,0,2.96565558786179,0,0,0,0,0,0,0,0,0.520855522170466,0,0.724999575434793,0.455173793141999,3.55955110409873,3.07303986298317,0,0.583209226766509,0,0,0.241192877250816,0,0,0,0,0.32681539055697,15.0577643820892,1.23120413606075,0.113942055847001,0,0.987334088507493,1.08647371922008,8.93203247249374,0.549585560411174,0,0,0,0,0.676786981851542,0.392125068635479,0,0,0,3.16497096792041,0.163232808159148,1.97894300007517,0.432777279484182,0,0,0,0,0,0,0,0,0,0,3.7176277597097,0,0,0,0.61214552326098,0.189559738885464,2.25485129121739,1.65901106235595,0,0,0.313932918407225,0,1.13843818411917,0,4.16543372004314,14.1109052276704,6.7906181132714,1.22308667769421,0.171986032471617,0,0,0,3.87956065953678,0,0.677942222341597,0,0,0,3.32437350649165,2.48492342779755,0,1.19885765749278,1.87317542300338,0.229073192331831,0.343189995723929,0,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,2.1964690054889,0,0,0.134366944973453,0,1.16495949527454,0,0,0.13480708770837,0,0,0,0,0.482259445395058,1.65047323916681,0.415440338029185,1.1248694577575,10.8332273638113,0,2.34804281319486,0.945668487590378,1.41627387964495,0.316801009558219,0,19.1915197319445,0,0,0.5085370753095,0,0,0,5.98650957812437,0.492555124496034,0,1.69968137280189,0,0,0,0.13223260174269,0,7.75296524548339,0.427149650270779,0.157204305099666,0,0,0,0,3.19170628885091,0,0,0,0,1.88464915500281,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0,0.691743174681154,0.249960815924213,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,0,0,0,0,0,0.398095888698616,0,0,0,0,3.46715694733146,1.07220795687463,0.782982875895635,1.13352962756136,2.08370226891451,2.93684045407761,0.179088841081487,2.47041157728778,3.94711289241673,0.530067437837643,0.964570191354574,0,0,0,0,0.138258436151731,0,0.531459361253452,0.163565394255844,1.31043939538565,0.491545817507439,1.90180911022764,0,0,0,0,0,18.7438540344056,20.5285495810881,0.895260599125562,0,0.314531883711793,0,0,0,0.495743057036009,0.558644917973244,0,0,1.60114149657094,0,0,0.321146125482298,0,0,0,0,0.0691572524642179,0,0,5.79071539156051,3.0672128070412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| ||
|short_description=p1@KLC3 | |short_description=p1@KLC3 | ||
}} | }} |
Latest revision as of 16:55, 18 September 2015
Short description: | p1@KLC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLC3_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | 0bp_to_ENST00000391946, ENST00000494686, NM_177417, uc002pbe.2, uc002pbf.1, uc010ejy.1_5end |
EntrezGene: | KLC3 |
HGNC: | 20717 |
UniProt: | Q6P597 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.13e-39 | 253 |
endo-epithelial cell | 4.27e-29 | 42 |
endodermal cell | 2.25e-20 | 58 |
respiratory epithelial cell | 8.07e-15 | 13 |
epithelial cell of alimentary canal | 1.04e-11 | 20 |
epithelial cell of tracheobronchial tree | 4.54e-10 | 9 |
epithelial cell of lower respiratory tract | 4.54e-10 | 9 |
general ecto-epithelial cell | 9.99e-10 | 14 |
squamous epithelial cell | 1.96e-08 | 63 |
transitional epithelial cell | 3.12e-07 | 4 |
urothelial cell | 3.12e-07 | 4 |
ecto-epithelial cell | 3.87e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.54e-13 | 160 |
endoderm | 3.54e-13 | 160 |
presumptive endoderm | 3.54e-13 | 160 |
urinary system structure | 1.58e-12 | 47 |
renal system | 4.20e-12 | 48 |
respiratory system | 4.75e-10 | 74 |
orifice | 6.22e-10 | 36 |
oral opening | 4.98e-09 | 22 |
transitional epithelium | 8.75e-09 | 6 |
mucosa | 1.52e-08 | 20 |
head | 2.41e-08 | 56 |
urothelium | 3.33e-08 | 5 |
anterior region of body | 1.19e-07 | 62 |
craniocervical region | 1.19e-07 | 62 |
digestive system | 2.04e-07 | 145 |
digestive tract | 2.04e-07 | 145 |
primitive gut | 2.04e-07 | 145 |
extraembryonic membrane | 2.12e-07 | 14 |
membranous layer | 2.12e-07 | 14 |
endo-epithelium | 3.00e-07 | 82 |
mouth | 4.05e-07 | 29 |
stomodeum | 4.05e-07 | 29 |
epithelial bud | 8.76e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.70e-13 | 106 |
squamous cell carcinoma | 3.40e-12 | 14 |
cell type cancer | 7.42e-09 | 143 |