FFCP PHASE1:Hg19::chr14:104583456..104583460,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:104583456..104583460,+
|short_description=p1@MIR203
|description=CAGE_peak_1_at_MIR203_5end
|association_with_transcript=-281bp_to_NR_029620,uc010tyg.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=406986 | |EntrezGene=406986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31581 | |HGNC=31581 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-281bp_to_NR_029620,uc010tyg.1_5end | |||
|cluster_id=chr14:104583456..104583460,+ | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_1_at_MIR203_5end | |||
|id=chr14:104583456..104583460,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.49e-26!43;CL:0000223!3.65e-19!59;CL:0000066!3.84e-15!254;CL:0002251!1.58e-14!21;CL:0002368!1.38e-12!13;CL:0000622!6.42e-08!5;CL:0002202!1.10e-07!9;CL:0002632!1.10e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.72e-19;13!CL:0002076;4.48e-19;42!CL:0002202;9.85e-12;9!CL:0002632;9.85e-12;9!CL:0000622;1.56e-11;5!CL:0002251;8.79e-11;20!CL:0000154;1.54e-09;6!CL:0000244;1.54e-09;4!CL:0000731;1.54e-09;4!CL:0002328;3.51e-08;3!CL:0002623;1.09e-07;3!CL:0002159;2.02e-07;14!CL:0000307;2.52e-07;3!CL:0002621;7.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.75e-24,42;CL:0002368,1.89e-19,13;CL:0000223,7.02e-19,58;CL:0000066,4.17e-14,253;CL:0002202,1.11e-11,9;CL:0002632,1.11e-11,9;CL:0000622,1.41e-11,5;CL:0002251,8.42e-11,20;CL:0000154,1.42e-09,6;CL:0000244,1.55e-09,4;CL:0000731,1.55e-09,4;CL:0002328,3.64e-08,3;CL:0002623,1.14e-07,3;CL:0002159,1.78e-07,14;CL:0000068,2.36e-07,3;CL:0000069,2.36e-07,3;CL:0000307,2.36e-07,3;CL:0000377,2.36e-07,3;CL:0002621,7.07e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.71e-10;58!CL:0000377;2.52e-07;3 | |||
|ontology_enrichment_disease=DOID:299!8.91e-09!25;DOID:1749!1.55e-07!14;DOID:305!2.59e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.07e-09;4!DOID:1612;2.07e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.77e-09,4;DOID:1612,1.77e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.45e-22!169;UBERON:0000925!3.45e-22!169;UBERON:0006595!3.45e-22!169;UBERON:0001007!2.36e-15!155;UBERON:0001555!2.36e-15!155;UBERON:0007026!2.36e-15!155;UBERON:0001004!2.40e-15!72;UBERON:0004921!6.93e-14!129;UBERON:0004185!6.93e-14!129;UBERON:0000077!1.19e-12!130;UBERON:0000161!2.45e-10!35;UBERON:0000065!4.04e-10!53;UBERON:0005631!4.71e-10!14;UBERON:0000158!4.71e-10!14;UBERON:0000166!4.84e-09!21;UBERON:0001041!9.57e-08!98;UBERON:0005181!1.13e-07!35;UBERON:0000365!2.47e-07!5;UBERON:0007196!3.26e-07!14;UBERON:0001558!3.26e-07!14;UBERON:0000344!3.76e-07!12;UBERON:0000165!5.53e-07!28;UBERON:0000930!5.53e-07!28;UBERON:0005178!5.78e-07!34;UBERON:0002224!5.78e-07!34;UBERON:0005911!6.09e-07!82;UBERON:0000915!8.98e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.42e-10;28!UBERON:0007196;1.60e-10;15!UBERON:0001558;1.60e-10;15!UBERON:0000161;1.33e-09;19!UBERON:0000166;1.33e-09;19!UBERON:0004815;3.51e-08;3!UBERON:0002031;3.51e-08;3!UBERON:0000486;3.92e-08;12!UBERON:0001723;5.13e-08;3!UBERON:0001033;5.13e-08;3!UBERON:0000365;1.28e-07;5!UBERON:0003126;1.54e-07;7!UBERON:0001005;1.54e-07;7!UBERON:0005181;2.94e-07;35!UBERON:0001949;7.22e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,7.92e-15,74;UBERON:0004119,1.97e-13,160;UBERON:0000925,1.97e-13,160;UBERON:0006595,1.97e-13,160;UBERON:0000166,3.32e-12,22;UBERON:0007196,1.63e-10,15;UBERON:0001558,1.63e-10,15;UBERON:0000165,4.32e-10,29;UBERON:0000930,4.32e-10,29;UBERON:0000065,3.08e-09,54;UBERON:0000915,2.13e-08,52;UBERON:0004815,3.64e-08,3;UBERON:0002031,3.64e-08,3;UBERON:0005181,4.78e-08,35;UBERON:0001723,6.12e-08,3;UBERON:0001033,6.12e-08,3;UBERON:0010056,6.12e-08,3;UBERON:0000161,1.05e-07,36;UBERON:0000365,1.28e-07,5;UBERON:0003126,1.36e-07,7;UBERON:0001005,1.36e-07,7;UBERON:0001007,2.53e-07,145;UBERON:0001555,2.53e-07,145;UBERON:0007026,2.53e-07,145;UBERON:0005631,2.64e-07,14;UBERON:0000158,2.64e-07,14;UBERON:0005178,4.26e-07,34;UBERON:0002224,4.26e-07,34;UBERON:0001444,6.86e-07,49;UBERON:0001949,7.07e-07,3 | |||
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| ||
|short_description=p1@MIR203 | |||
}} | }} |
Latest revision as of 16:53, 18 September 2015
Short description: | p1@MIR203 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR203_5end |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | -281bp_to_NR_029620, uc010tyg.1_5end |
EntrezGene: | MIR203 |
HGNC: | 31581 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.75e-24 | 42 |
respiratory epithelial cell | 1.89e-19 | 13 |
endodermal cell | 7.02e-19 | 58 |
epithelial cell | 4.17e-14 | 253 |
epithelial cell of tracheobronchial tree | 1.11e-11 | 9 |
epithelial cell of lower respiratory tract | 1.11e-11 | 9 |
acinar cell | 1.41e-11 | 5 |
epithelial cell of alimentary canal | 8.42e-11 | 20 |
protein secreting cell | 1.42e-09 | 6 |
transitional epithelial cell | 1.55e-09 | 4 |
urothelial cell | 1.55e-09 | 4 |
bronchial epithelial cell | 3.64e-08 | 3 |
acinar cell of salivary gland | 1.14e-07 | 3 |
general ecto-epithelial cell | 1.78e-07 | 14 |
duct epithelial cell | 2.36e-07 | 3 |
branched duct epithelial cell | 2.36e-07 | 3 |
tracheal epithelial cell | 2.36e-07 | 3 |
tracheoblast | 2.36e-07 | 3 |
gingival epithelial cell | 7.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 7.92e-15 | 74 |
endoderm-derived structure | 1.97e-13 | 160 |
endoderm | 1.97e-13 | 160 |
presumptive endoderm | 1.97e-13 | 160 |
oral opening | 3.32e-12 | 22 |
tracheobronchial tree | 1.63e-10 | 15 |
lower respiratory tract | 1.63e-10 | 15 |
mouth | 4.32e-10 | 29 |
stomodeum | 4.32e-10 | 29 |
respiratory tract | 3.08e-09 | 54 |
thoracic segment of trunk | 2.13e-08 | 52 |
lower respiratory tract epithelium | 3.64e-08 | 3 |
epithelium of bronchus | 3.64e-08 | 3 |
thoracic segment organ | 4.78e-08 | 35 |
tongue | 6.12e-08 | 3 |
gustatory system | 6.12e-08 | 3 |
future tongue | 6.12e-08 | 3 |
orifice | 1.05e-07 | 36 |
urothelium | 1.28e-07 | 5 |
trachea | 1.36e-07 | 7 |
respiratory airway | 1.36e-07 | 7 |
digestive system | 2.53e-07 | 145 |
digestive tract | 2.53e-07 | 145 |
primitive gut | 2.53e-07 | 145 |
extraembryonic membrane | 2.64e-07 | 14 |
membranous layer | 2.64e-07 | 14 |
thoracic cavity element | 4.26e-07 | 34 |
thoracic cavity | 4.26e-07 | 34 |
subdivision of head | 6.86e-07 | 49 |
gingival epithelium | 7.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.77e-09 | 4 |
breast cancer | 1.77e-09 | 4 |