FFCP PHASE1:Hg19::chr2:85839349..85839363,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:85839349..85839363,+ to FFCP PHASE1:Hg19::chr2:85839349..85839363,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10713 | |EntrezGene=10713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20071 | |HGNC=20071 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=104bp_to_ENST00000465282_5end | |||
|cluster_id=chr2:85839349..85839363,+ | |||
|description=CAGE_peak_10_at_USP39_5end | |||
|id=chr2:85839349..85839363,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002328;1.64e-17;3!CL:0002591;9.12e-14;1!CL:0002554;1.59e-07;2!CL:0002363;1.59e-07;2!CL:0002575;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,2.30e-17,3;CL:0002591,1.25e-13,1;CL:0002554,1.05e-07,2;CL:0002575,1.28e-07,2;CL:0002363,2.40e-07,2;CL:0000008,2.40e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.59e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.64e-17;3!UBERON:0002031;1.64e-17;3!UBERON:0002185;6.79e-11;5!UBERON:0000485;4.91e-08;7!UBERON:0003566;1.59e-07;2!UBERON:0000078;1.59e-07;2!UBERON:0001777;1.59e-07;2!UBERON:0002012;1.59e-07;2!UBERON:0008886;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.30e-17,3;UBERON:0002031,2.30e-17,3;UBERON:0000485,6.65e-13,9;UBERON:0002185,8.29e-11,5;UBERON:0000078,1.87e-07,2;UBERON:0007497,1.87e-07,2;UBERON:0003643,1.87e-07,2;UBERON:0003504,1.87e-07,2;UBERON:0003469,1.87e-07,2;UBERON:0003496,1.87e-07,2;UBERON:0002012,1.87e-07,2;UBERON:0008886,1.87e-07,2;UBERON:0007303,1.87e-07,2;UBERON:0002061,1.87e-07,2;UBERON:0005432,1.87e-07,2;UBERON:0004363,1.87e-07,2;UBERON:0003566,2.40e-07,2;UBERON:0001777,2.40e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.328402357799783,0,0,0.383829398097213,0,0.919421224478927,1.204823675113,1.10926203050036,0.0774672005803016,0.284338464974843,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0.659702600373432,0.398927315243264,0,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0.889509253863555,0,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0.657751618414705,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0,0.795285947051099,0,0,0.665188192387692,0.087834785693126,0.261958150995425,0,0.741568885568859,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0.151357427644931,0,0,0,0,0,0.352303495931295,0.323745888736263,0.421352420106746,0,0.122834317311768,0,0,0,1.82032272387605,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0,0.487185025805993,0.252433774244115,0.276149695926898,0.484938170456436,0,0.201504196455281,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.414644220061482,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0.231860809950154,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0.288239906833923,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0.600686115687835,0,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0.195801157462741,1.37257369524342,0,0,0,0.909382714338778,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0,0,0,0,0.232420756919918,0.241718899183244,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0.366277859273374,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0.255679882248303,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.858749320451947,0.372158369359667,0,0.190630193923825,0,0,0.636406495851874,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0.272999822815972,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0,0.35667105148125,0,0,0,0.379473173765715,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0.577076851905779,0.213425530045242,0.318852545457645,0,0.191505370132367,0.423347165447766,0.649243880549111,0,0.228234679033192,0.156679895773023,2.50634477090067,0,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0.223676107892416,0,0.781552381608161,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0.23874448473769,0.296964680832639,0.921482106297696,0,0.140669416410513,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0.508507300585533,0,1.37897349296586,0.291604613383254,0,0,0,0,0.442317039724898,0.591095237907095,0,0.10893846351899,0,0,0,0.23056390438806,0,0,1.27600463892768,0.0915975934018623,0,0,0,0,0.225595660617181,1.17637520590644,0.167821586975843,0.189753732724185,0,0,0.489698424477443,0.141353071433941,0,0,0,0,0,0.123563938946503,0.208843899010911,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0.30607276163049,0,4.96067284067825,0.518440956986236,0,0,0,0,0,0,0,0.195984794828755,0,0.34945333648406,0.171986032471617,0.0967563312890851,0.0730893170861856,0.492692742319255,0,0,0.451961481561065,0,0.19871461170299,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0.273810757783986,0,0,1.05154941711726,0,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.247247575143499,0.0674035438541849,0.196854963029498,0.0846733320657845,0,0.272406812223151,0.643012593860077,0.550157746388935,1.24632101408756,0,0,0,0.670869375198532,0,0.0524545881349981,0,0,0.191915197319445,0,0,0.762805612964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| ||
|short_description=p10@USP39 | |||
}} | }} |
Latest revision as of 16:50, 18 September 2015
Short description: | p10@USP39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_USP39_5end |
Coexpression cluster: | NA |
Association with transcript: | 104bp_to_ENST00000465282_5end |
EntrezGene: | USP39 |
HGNC: | 20071 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 2.30e-17 | 3 |
smooth muscle cell of the pulmonary artery | 1.25e-13 | 1 |
fibroblast of lymphatic vessel | 1.05e-07 | 2 |
central nervous system pericyte | 1.28e-07 | 2 |
keratocyte | 2.40e-07 | 2 |
migratory cranial neural crest cell | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.30e-17 | 3 |
epithelium of bronchus | 2.30e-17 | 3 |
simple columnar epithelium | 6.65e-13 | 9 |
bronchus | 8.29e-11 | 5 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.87e-07 | 2 |
developing epithelial placode | 1.87e-07 | 2 |
respiratory system arterial blood vessel | 1.87e-07 | 2 |
respiratory system blood vessel | 1.87e-07 | 2 |
respiratory system artery | 1.87e-07 | 2 |
head blood vessel | 1.87e-07 | 2 |
pulmonary artery | 1.87e-07 | 2 |
pulmonary vascular system | 1.87e-07 | 2 |
pharyngeal vasculature | 1.87e-07 | 2 |
truncus arteriosus | 1.87e-07 | 2 |
aortic sac | 1.87e-07 | 2 |
pharyngeal arch artery | 1.87e-07 | 2 |
head connective tissue | 2.40e-07 | 2 |
substantia propria of cornea | 2.40e-07 | 2 |