FFCP PHASE1:Hg19::chr15:66858278..66858296,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=197021 | |EntrezGene=197021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15583 | |HGNC=15583 | ||
|TSSclassifier=strong | |||
|UniProt=B3KQY0 | |UniProt=B3KQY0 | ||
|association_with_transcript=5bp_to_ENST00000537670_5end | |association_with_transcript=5bp_to_ENST00000537670_5end | ||
|cluster_id=chr15:66858278..66858296,- | |||
|coexpression_cluster_id=C3504 | |||
|description=CAGE_peak_2_at_LCTL_5end | |description=CAGE_peak_2_at_LCTL_5end | ||
|id=chr15:66858278..66858296,- | |id=chr15:66858278..66858296,- | ||
|ontology_enrichment_celltype=CL:0000055!2.64e-21!180;CL:0002319!1.45e-14!25;CL:0000243!5.31e-13!15;CL:0000125!5.31e-13!15;CL:0000030!5.31e-13!15;CL:0000339!5.31e-13!15;CL:0000128!1.46e-12!7;CL:0000126!1.46e-12!7;CL:0000127!1.46e-12!7;CL:0002453!1.46e-12!7;CL:0000133!2.35e-11!59;CL:0000095!3.03e-11!17;CL:0000123!3.03e-11!17;CL:0000221!4.22e-09!71;CL:0002322!1.18e-08!5;CL:0000333!1.89e-08!41;CL:0000057!1.20e-07!75;CL:0000306!2.56e-07!4;CL:0002222!2.56e-07!4;CL:0002224!2.56e-07!4 | |ontology_enrichment_celltype=CL:0000055!2.64e-21!180;CL:0002319!1.45e-14!25;CL:0000243!5.31e-13!15;CL:0000125!5.31e-13!15;CL:0000030!5.31e-13!15;CL:0000339!5.31e-13!15;CL:0000128!1.46e-12!7;CL:0000126!1.46e-12!7;CL:0000127!1.46e-12!7;CL:0002453!1.46e-12!7;CL:0000133!2.35e-11!59;CL:0000095!3.03e-11!17;CL:0000123!3.03e-11!17;CL:0000221!4.22e-09!71;CL:0002322!1.18e-08!5;CL:0000333!1.89e-08!41;CL:0000057!1.20e-07!75;CL:0000306!2.56e-07!4;CL:0002222!2.56e-07!4;CL:0002224!2.56e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.06e-38;7!CL:0000126;1.06e-38;7!CL:0000127;1.06e-38;7!CL:0002605;1.88e-23;3!CL:0000306;1.99e-17;4!CL:0002222;1.99e-17;4!CL:0002224;1.99e-17;4!CL:0002319;8.54e-17;25!CL:0000243;1.10e-15;15!CL:0000125;1.10e-15;15!CL:0000047;1.14e-15;2!CL:0000095;5.55e-14;17!CL:0002603;4.88e-11;3!CL:0002539;3.76e-07;10!CL:0002322;8.65e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,6.59e-39,7;CL:0000126,6.59e-39,7;CL:0000127,6.59e-39,7;CL:0002453,6.59e-39,7;CL:0002605,1.15e-23,3;CL:0000306,2.87e-17,4;CL:0002222,2.87e-17,4;CL:0002224,2.87e-17,4;CL:0002319,8.67e-17,25;CL:0000243,9.11e-16,15;CL:0000125,9.11e-16,15;CL:0000030,9.11e-16,15;CL:0000339,9.11e-16,15;CL:0000095,4.69e-14,17;CL:0000123,4.69e-14,17;CL:0000133,7.88e-13,59;CL:0000333,9.92e-13,41;CL:0002603,4.66e-11,3;CL:0000221,3.03e-10,72;CL:0002539,3.20e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000339;1.10e-15;15!CL:0000133;4.69e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.72e-11!86;UBERON:0001017!4.76e-11!82;UBERON:0000073!1.67e-10!94;UBERON:0001016!1.67e-10!94;UBERON:0004121!2.69e-10!169;UBERON:0000033!5.08e-10!123;UBERON:0000924!9.48e-10!173;UBERON:0006601!9.48e-10!173;UBERON:0000153!4.71e-09!129;UBERON:0007811!4.71e-09!129;UBERON:0007625!2.37e-08!11;UBERON:0003075!4.45e-08!86;UBERON:0007284!4.45e-08!86;UBERON:0000475!4.86e-08!365;UBERON:0000955!6.43e-08!69;UBERON:0006238!6.43e-08!69;UBERON:0003076!8.09e-08!15;UBERON:0003057!8.09e-08!15;UBERON:0001049!2.12e-07!57;UBERON:0005068!2.12e-07!57;UBERON:0006241!2.12e-07!57;UBERON:0007135!2.12e-07!57;UBERON:0002346!2.23e-07!90;UBERON:0010077!2.56e-07!4;UBERON:0005389!2.56e-07!4;UBERON:0000484!2.56e-07!4;UBERON:0002546!2.56e-07!4;UBERON:0000965!2.56e-07!4;UBERON:0001803!2.56e-07!4;UBERON:0003073!2.56e-07!4;UBERON:0005426!2.56e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.99e-17;4!UBERON:0005389;1.99e-17;4!UBERON:0000484;1.99e-17;4!UBERON:0000965;1.99e-17;4!UBERON:0001803;1.99e-17;4!UBERON:0004237;3.76e-07;10!UBERON:0004695;3.76e-07;10!UBERON:0002111;3.76e-07;10!UBERON:0004178;3.76e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,2.87e-17,4;UBERON:0005389,2.87e-17,4;UBERON:0000484,2.87e-17,4;UBERON:0002546,2.87e-17,4;UBERON:0000965,2.87e-17,4;UBERON:0001803,2.87e-17,4;UBERON:0003073,2.87e-17,4;UBERON:0005426,2.87e-17,4;UBERON:0000076,6.70e-09,8;UBERON:0004237,3.20e-07,10;UBERON:0004695,3.20e-07,10;UBERON:0002111,3.20e-07,10;UBERON:0004178,3.20e-07,10 | |||
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|short_description=p2@LCTL | |short_description=p2@LCTL | ||
}} | }} |
Latest revision as of 16:33, 18 September 2015
Short description: | p2@LCTL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LCTL_5end |
Coexpression cluster: | C3504_astrocytoma_Chondrocyte_Astrocyte_Lens_Aortic_Fibroblast_Neural |
Association with transcript: | 5bp_to_ENST00000537670_5end |
EntrezGene: | LCTL |
HGNC: | 15583 |
UniProt: | B3KQY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 6.59e-39 | 7 |
macroglial cell | 6.59e-39 | 7 |
astrocyte | 6.59e-39 | 7 |
oligodendrocyte precursor cell | 6.59e-39 | 7 |
astrocyte of the cerebral cortex | 1.15e-23 | 3 |
crystallin accumulating cell | 2.87e-17 | 4 |
vertebrate lens cell | 2.87e-17 | 4 |
lens epithelial cell | 2.87e-17 | 4 |
neural cell | 8.67e-17 | 25 |
glial cell (sensu Vertebrata) | 9.11e-16 | 15 |
glial cell | 9.11e-16 | 15 |
glioblast | 9.11e-16 | 15 |
glioblast (sensu Vertebrata) | 9.11e-16 | 15 |
neuron associated cell | 4.69e-14 | 17 |
neuron associated cell (sensu Vertebrata) | 4.69e-14 | 17 |
neurectodermal cell | 7.88e-13 | 59 |
migratory neural crest cell | 9.92e-13 | 41 |
astrocyte of the cerebellum | 4.66e-11 | 3 |
ectodermal cell | 3.03e-10 | 72 |
aortic smooth muscle cell | 3.20e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 2.87e-17 | 4 |
transparent eye structure | 2.87e-17 | 4 |
simple cuboidal epithelium | 2.87e-17 | 4 |
cranial placode | 2.87e-17 | 4 |
lens of camera-type eye | 2.87e-17 | 4 |
epithelium of lens | 2.87e-17 | 4 |
lens placode | 2.87e-17 | 4 |
lens vesicle | 2.87e-17 | 4 |
external ectoderm | 6.70e-09 | 8 |
blood vessel smooth muscle | 3.20e-07 | 10 |
arterial system smooth muscle | 3.20e-07 | 10 |
artery smooth muscle tissue | 3.20e-07 | 10 |
aorta smooth muscle tissue | 3.20e-07 | 10 |