FFCP PHASE1:Hg19::chr2:85788551..85788601,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:85788551..85788601,-
|short_description=p2@GGCX
|description=CAGE_peak_2_at_GGCX_5end
|association_with_transcript=0bp_to_ENST00000423570_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2677 | |EntrezGene=2677 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4247 | |HGNC=4247 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDU9 | |UniProt=F8WDU9 | ||
|association_with_transcript=0bp_to_ENST00000423570_5end | |||
|cluster_id=chr2:85788551..85788601,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_GGCX_5end | |||
|id=chr2:85788551..85788601,- | |||
|ontology_enrichment_celltype=CL:0002321!3.99e-16!248;CL:0000220!4.24e-16!246;CL:0000055!1.71e-15!180;CL:0000183!6.64e-13!59;CL:0000680!9.69e-12!57;CL:0000056!9.69e-12!57;CL:0000355!9.69e-12!57;CL:0000393!9.79e-11!60;CL:0000211!9.79e-11!60;CL:0000187!1.21e-10!54;CL:0000192!5.86e-10!42;CL:0000514!5.86e-10!42;CL:0000066!6.87e-10!254;CL:0000548!9.74e-10!679;CL:0000004!9.74e-10!679;CL:0000255!9.74e-10!679;CL:0000012!2.45e-09!682;CL:0000359!1.16e-07!32;CL:0000222!1.18e-07!119;CL:0000144!8.40e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.95e-08;32!CL:0000192;6.96e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.02e-16,250;CL:0000680,5.74e-11,58;CL:0000056,5.74e-11,58;CL:0000355,5.74e-11,58;CL:0000066,3.21e-10,253;CL:0000393,4.97e-10,61;CL:0000211,4.97e-10,61;CL:0000187,6.71e-10,55;CL:0000192,3.87e-09,43;CL:0000514,3.87e-09,43;CL:0000359,1.16e-07,32;CL:0000222,1.52e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;6.96e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.19e-22!216;UBERON:0005256!4.72e-21!143;UBERON:0000475!2.81e-19!365;UBERON:0003104!3.01e-18!238;UBERON:0009142!3.01e-18!238;UBERON:0000119!3.69e-17!312;UBERON:0000483!7.35e-17!309;UBERON:0000490!3.62e-16!138;UBERON:0003914!1.43e-15!118;UBERON:0000481!5.15e-15!347;UBERON:0009569!1.85e-12!113;UBERON:0004290!5.20e-12!70;UBERON:0000486!1.15e-11!82;UBERON:0001134!3.46e-11!61;UBERON:0002036!3.46e-11!61;UBERON:0003082!3.46e-11!61;UBERON:0000914!4.46e-11!83;UBERON:0002329!4.46e-11!83;UBERON:0003077!4.46e-11!83;UBERON:0003059!4.46e-11!83;UBERON:0007282!4.46e-11!83;UBERON:0009618!4.46e-11!83;UBERON:0007285!4.46e-11!83;UBERON:0002417!1.03e-10!61;UBERON:0000916!1.03e-10!61;UBERON:0002385!2.77e-10!63;UBERON:0001015!2.77e-10!63;UBERON:0000383!2.77e-10!63;UBERON:0004111!7.50e-10!241;UBERON:0002107!1.84e-09!19;UBERON:0006925!1.84e-09!19;UBERON:0008836!1.84e-09!19;UBERON:0000477!2.06e-09!286;UBERON:0000468!3.97e-09!659;UBERON:0005172!4.04e-09!55;UBERON:0005173!4.04e-09!55;UBERON:0002049!4.37e-09!79;UBERON:0007798!4.37e-09!79;UBERON:0000025!4.98e-09!194;UBERON:0001048!6.20e-09!168;UBERON:0002365!1.43e-08!31;UBERON:0002330!1.43e-08!31;UBERON:0000466!2.27e-08!126;UBERON:0005177!3.23e-08!107;UBERON:0000467!3.80e-08!625;UBERON:0000480!3.82e-08!626;UBERON:0004872!4.66e-08!84;UBERON:0008835!8.03e-08!22;UBERON:0003894!8.03e-08!22;UBERON:0001637!1.13e-07!42;UBERON:0003509!1.13e-07!42;UBERON:0004572!1.13e-07!42;UBERON:0009497!1.46e-07!25;UBERON:0000015!1.46e-07!25;UBERON:0002423!1.46e-07!25;UBERON:0006235!1.46e-07!25;UBERON:0004161!1.46e-07!25;UBERON:0006554!1.53e-07!44;UBERON:0007499!1.77e-07!25;UBERON:0009854!3.52e-07!23;UBERON:0001008!4.61e-07!45;UBERON:0009856!6.55e-07!26;UBERON:0004573!7.18e-07!33;UBERON:0004571!7.18e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.89e-09;19!UBERON:0006925;1.89e-09;19!UBERON:0002365;4.06e-08;31!UBERON:0002330;4.06e-08;31!UBERON:0002423;1.60e-07;25!UBERON:0005172;8.51e-07;52!UBERON:0005173;8.51e-07;52!UBERON:0002417;9.37e-07;58!UBERON:0000916;9.37e-07;58 | |||
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| ||
|short_description=p2@GGCX | |||
}} | }} |
Latest revision as of 16:23, 18 September 2015
Short description: | p2@GGCX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GGCX_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000423570_5end |
EntrezGene: | GGCX |
HGNC: | 4247 |
UniProt: | F8WDU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.02e-16 | 250 |
muscle precursor cell | 5.74e-11 | 58 |
myoblast | 5.74e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.74e-11 | 58 |
epithelial cell | 3.21e-10 | 253 |
electrically responsive cell | 4.97e-10 | 61 |
electrically active cell | 4.97e-10 | 61 |
muscle cell | 6.71e-10 | 55 |
smooth muscle cell | 3.87e-09 | 43 |
smooth muscle myoblast | 3.87e-09 | 43 |
vascular associated smooth muscle cell | 1.16e-07 | 32 |
mesodermal cell | 1.52e-07 | 121 |