FFCP PHASE1:Hg19::chr15:66639676..66639681,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=692149 | |EntrezGene=692149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=32571 | |HGNC=32571 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000516903,NR_004388,uc010bhp.1_5end | |association_with_transcript=0bp_to_ENST00000516903,NR_004388,uc010bhp.1_5end | ||
|cluster_id=chr15:66639676..66639681,- | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_1_at_SCARNA14_5end | |description=CAGE_peak_1_at_SCARNA14_5end | ||
|id=chr15:66639676..66639681,- | |id=chr15:66639676..66639681,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;5.15e-21;5!CL:0002321;5.93e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.54e-18!235;DOID:14566!1.68e-17!239;DOID:0050687!2.48e-14!143;DOID:305!1.72e-13!106;DOID:0050686!2.55e-09!137;DOID:3095!1.12e-07!22;DOID:2994!1.12e-07!22 | |ontology_enrichment_disease=DOID:162!3.54e-18!235;DOID:14566!1.68e-17!239;DOID:0050687!2.48e-14!143;DOID:305!1.72e-13!106;DOID:0050686!2.55e-09!137;DOID:3095!1.12e-07!22;DOID:2994!1.12e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:169;9.07e-18;6!DOID:0060058;2.73e-11;10!DOID:171;3.02e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.07e-18,6;DOID:0060058,2.73e-11,10;DOID:171,3.02e-11,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;5.15e-21;5!UBERON:0002410;5.15e-21;5!UBERON:0000010;2.45e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.15e-21,5;UBERON:0002410,5.15e-21,5;UBERON:0000010,2.45e-12,8 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.426507697462265,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0.890469640183247,0,0,0,0,0.251932747854276,0,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0.489698424477443,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0.288109595976299,0.49701014226173,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0.275078873194468,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,3.65377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27894371303652,0.107824811396682,0,0.436838552768056,0,0,0.371807292777007,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0.577628330751691,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071746,0,0,0,0,0,0.215927591218621,0,0,0.316027223465453,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0.118920090777569,0.22589216407792,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.506794004045748,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | ||
|short_description=p1@SCARNA14 | |short_description=p1@SCARNA14 | ||
}} | }} |
Latest revision as of 16:12, 18 September 2015
Short description: | p1@SCARNA14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCARNA14_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | 0bp_to_ENST00000516903, NR_004388, uc010bhp.1_5end |
EntrezGene: | SCARNA14 |
HGNC: | 32571 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 5.15e-21 | 5 |
autonomic nervous system | 5.15e-21 | 5 |
peripheral nervous system | 2.45e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.07e-18 | 6 |
lymphoma | 2.73e-11 | 10 |
neuroectodermal tumor | 3.02e-11 | 10 |