FFCP PHASE1:Hg19::chr1:57044893..57044934,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:57044893..57044934,- to FFCP PHASE1:Hg19::chr1:57044893..57044934,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8613 | |EntrezGene=8613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9229 | |HGNC=9229 | ||
|TSSclassifier=strong | |||
|UniProt=O14495 | |UniProt=O14495 | ||
|association_with_transcript=306bp_to_ENST00000371250_5end | |||
|cluster_id=chr1:57044893..57044934,- | |||
|description=CAGE_peak_5_at_PPAP2B_5end | |||
|id=chr1:57044893..57044934,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.89e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.12e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-23!115;UBERON:0000468!1.92e-16!659;UBERON:0000062!5.92e-14!511;UBERON:0000467!4.52e-13!625;UBERON:0000480!7.58e-13!626;UBERON:0000475!1.19e-12!365;UBERON:0001017!1.99e-12!82;UBERON:0005743!1.03e-11!86;UBERON:0001049!1.50e-11!57;UBERON:0005068!1.50e-11!57;UBERON:0006241!1.50e-11!57;UBERON:0007135!1.50e-11!57;UBERON:0002616!8.65e-10!59;UBERON:0000922!1.86e-09!612;UBERON:0000955!1.98e-09!69;UBERON:0006238!1.98e-09!69;UBERON:0000073!5.15e-09!94;UBERON:0001016!5.15e-09!94;UBERON:0002050!6.78e-09!605;UBERON:0005423!6.78e-09!605;UBERON:0000481!1.01e-08!347;UBERON:0003075!1.04e-08!86;UBERON:0007284!1.04e-08!86;UBERON:0000923!1.12e-08!604;UBERON:0005291!1.12e-08!604;UBERON:0006598!1.12e-08!604;UBERON:0002532!1.12e-08!604;UBERON:0001893!2.11e-08!34;UBERON:0002020!3.00e-08!34;UBERON:0003528!3.00e-08!34;UBERON:0003080!3.61e-08!42;UBERON:0000153!4.12e-08!129;UBERON:0007811!4.12e-08!129;UBERON:0002791!4.41e-08!33;UBERON:0000033!4.58e-08!123;UBERON:0002780!8.39e-08!41;UBERON:0001890!8.39e-08!41;UBERON:0006240!8.39e-08!41;UBERON:0002346!9.18e-08!90;UBERON:0004121!1.22e-07!169;UBERON:0001869!1.27e-07!32;UBERON:0000477!1.72e-07!286;UBERON:0004111!4.13e-07!241;UBERON:0000924!4.66e-07!173;UBERON:0006601!4.66e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.30e-09;34!UBERON:0003528;1.67e-08;34!UBERON:0002020;1.67e-08;34!UBERON:0001869;2.45e-08;32!UBERON:0007023;2.61e-08;114!UBERON:0002791;3.45e-08;32!UBERON:0002780;4.62e-07;41!UBERON:0001890;4.62e-07;41!UBERON:0000073;8.49e-07;53!UBERON:0002616;8.49e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.29e-32,114;UBERON:0001049,2.99e-13,56;UBERON:0005068,2.99e-13,56;UBERON:0006241,2.99e-13,56;UBERON:0007135,2.99e-13,56;UBERON:0000073,1.01e-11,53;UBERON:0002616,1.01e-11,53;UBERON:0001017,1.25e-11,81;UBERON:0010314,1.20e-10,132;UBERON:0003075,2.67e-10,82;UBERON:0007284,2.67e-10,82;UBERON:0001893,3.28e-10,34;UBERON:0003528,5.23e-10,34;UBERON:0002020,5.23e-10,34;UBERON:0002780,9.87e-10,41;UBERON:0001890,9.87e-10,41;UBERON:0003080,9.87e-10,41;UBERON:0006240,9.87e-10,41;UBERON:0002346,1.35e-09,86;UBERON:0001869,3.62e-09,32;UBERON:0002791,4.29e-09,32;UBERON:0001016,5.49e-09,89;UBERON:0010371,8.28e-09,104;UBERON:0000955,9.53e-09,68;UBERON:0006238,9.53e-09,68;UBERON:0011216,8.63e-08,223;UBERON:0004121,8.97e-07,171;UBERON:0000924,8.97e-07,171;UBERON:0006601,8.97e-07,171 | |||
|phase1_expression=4.54195948176392,2.99740733447376,2.67813367782345,4.00293193412522,1.34088328328186,4.36169262050184,0,1.26343974685366,6.00726944859629,0.245733936501509,0,0,1.05506791291381,3.46545788288131,6.2965501388304,0.672325146451775,0.602694528023977,0.730310090387373,0,0.369363174230364,0.204000691244253,0.626909442956176,1.14494394852423,1.09499540058307,0.502170558379211,0.534893840235659,0.57470412614962,0.472264687882075,0,0,0,0,0,0,0.92960640696362,0,0,1.10799081706375,0.200544447470142,0.217010870715852,1.34349284543955,2.26725566213286,1.80302897343931,0.436194716338694,1.13362783106643,0.485168122375632,1.16214518452842,2.87817521615278,0.929119112685311,0.28769239232215,1.5369642391746,0.236482229888585,0.344745680736619,0.645484683583826,0,0.752969358170419,1.63743690034707,1.57306439111559,0.918251677112708,1.28371610830437,0,0,0.199463657621632,0.852449501065388,0.290209238628584,0.56738522469114,0,0,2.08593167368081,0.434377689410233,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0.255725123687061,1.44575660953827,6.01605492763067,4.49024208778554,0.795285947051099,1.45990461090791,1.79616152611729,0,0.614843499851882,5.10818394441079,0,0,1.62273696827342,2.08955684759121,3.58986493400936,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.550236083880135,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,1.01304409331664,0.794455084879313,4.30254931123221,1.41867352879343,1.12135520028461,1.06748995729705,0.24666754841716,0.622422070799533,0.134710672069688,0.163461903113459,0.756787138224657,0.576175924479999,0.234321431833797,1.24864030732128,1.1409436430889,1.04614076386261,0.352303495931295,0,0.421352420106746,0.61246251376468,0.368502951935304,1.03325781175765,2.37600571456411,6.67620709052104,0,0,0.336672227908132,0.250237039743928,0,0.877955241761676,1.83892677479412,4.05642759047811,0.113432183160021,1.07633781413317,2.13557388818567,1.90738711043606,0.900273288253207,1.95799805553034,0.257640540045629,1.67505170698431,2.70042131586026,1.16924406193438,1.7670364197088,3.22174645248048,3.23292113637624,3.90510551768276,1.10827308050404,0.339121184620975,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0.464775771478074,0.10366105501537,0.756962552626885,0,6.25798129319264,1.92972281457866,1.38134921352481,3.25057549622385,2.16563844500876,0,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,15.2106041786197,10.8110993834539,15.3605375737165,0,0.245976877086227,0.514703430895577,0,0,0,0,0.651616610620649,0,0,1.62302566965108,0.117408694235822,0.721832238805369,0,0.761016608938393,0,0,0.738651018262192,3.27605971194933,1.48631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0.381988425558278,0,3.4214489204541,0,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0.531876233169741,0,0.257207374262142,0,0,0.285955987316295,3.25572963234866,0,0,0,0,0.602878754119172,0,0.099972991182057,0,1.00451418286425,2.10833939483032,0.479249710983165,1.14861935834114,0,9.98991016006297,3.28762116080613,1.96967059563885,0,0,0,0,6.86055485400651,1.30139853857622,1.54657762555539,1.17261385734044,1.91381625495949,0,0,0,2.94459580125936,3.00102312635806,0.813795071099207,1.45579603071565,2.85486382075459,1.26161932027148,1.52283839490527,0.601892199455438,4.5481500811197,2.0694614258501,0.664225598535437,1.10621501125022,0.347534457872331,0.587403472388222,0.686286847621712,0,0,0,0.606255142892519,0,0.604780586659361,2.48107807818777,1.53461973288062,2.24528075546459,1.79394808957981,3.58195074346692,0.64341568457443,1.48418066444991,0,1.24293207719189,0.98552587216571,1.03850885836724,1.27831416305955,1.20859449591622,0,0.0920809889358963,0.574072240823034,0,1.04899531967539,0,0.15403067420883,0,0,0.316654886678627,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,11.4375522928972,0.0915694648183434,0.082509499920588,0,0.650060246036521,3.21367859688319,1.54673149267395,0.616194468458578,0.15350367472613,0.137836572484531,1.07420244868274,1.0151168573996,0.93749290157711,2.40386496246191,0,0,0,0,0,1.25924938732256,0.6970372701606,0,0,0.869932992075073,0.55597265731176,0.286249773483982,0,0.632758849437452,0.38126038784765,1.535386747868,5.13526785640705,0.95460974377781,0,0.359744915166629,0.823611089208164,0.353437207037059,0,0,0.421258456238981,1.46290121726877,1.46228093778771,0,0.136499911407986,2.2624869112594,4.52032466480971,1.10273068709225,2.65375590096488,5.69986150829892,0,2.62357900818653,0,0.6196469961995,0,0.143411352204052,0.0982490410131212,0,0,14.1442115649435,8.56166721695745,0,0.699869440489966,0.0962221127255121,0,0,10.9206808901064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0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| ||
|short_description=p5@PPAP2B | |||
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Latest revision as of 16:09, 18 September 2015
Short description: | p5@PPAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PPAP2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 306bp_to_ENST00000371250_5end |
EntrezGene: | PPAP2B |
HGNC: | 9229 |
UniProt: | O14495 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.12e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.29e-32 | 114 |
neural tube | 2.99e-13 | 56 |
neural rod | 2.99e-13 | 56 |
future spinal cord | 2.99e-13 | 56 |
neural keel | 2.99e-13 | 56 |
regional part of nervous system | 1.01e-11 | 53 |
regional part of brain | 1.01e-11 | 53 |
central nervous system | 1.25e-11 | 81 |
structure with developmental contribution from neural crest | 1.20e-10 | 132 |
neural plate | 2.67e-10 | 82 |
presumptive neural plate | 2.67e-10 | 82 |
telencephalon | 3.28e-10 | 34 |
brain grey matter | 5.23e-10 | 34 |
gray matter | 5.23e-10 | 34 |
regional part of forebrain | 9.87e-10 | 41 |
forebrain | 9.87e-10 | 41 |
anterior neural tube | 9.87e-10 | 41 |
future forebrain | 9.87e-10 | 41 |
neurectoderm | 1.35e-09 | 86 |
cerebral hemisphere | 3.62e-09 | 32 |
regional part of telencephalon | 4.29e-09 | 32 |
nervous system | 5.49e-09 | 89 |
ecto-epithelium | 8.28e-09 | 104 |
brain | 9.53e-09 | 68 |
future brain | 9.53e-09 | 68 |
organ system subdivision | 8.63e-08 | 223 |
ectoderm-derived structure | 8.97e-07 | 171 |
ectoderm | 8.97e-07 | 171 |
presumptive ectoderm | 8.97e-07 | 171 |