FFCP PHASE1:Hg19::chr1:57044893..57044934,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:57044893..57044934,-
|short_description=p5@PPAP2B
|description=CAGE_peak_5_at_PPAP2B_5end
|association_with_transcript=306bp_to_ENST00000371250_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8613 | |EntrezGene=8613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9229 | |HGNC=9229 | ||
|TSSclassifier=strong | |||
|UniProt=O14495 | |UniProt=O14495 | ||
|association_with_transcript=306bp_to_ENST00000371250_5end | |||
|cluster_id=chr1:57044893..57044934,- | |||
|description=CAGE_peak_5_at_PPAP2B_5end | |||
|id=chr1:57044893..57044934,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.89e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.12e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-23!115;UBERON:0000468!1.92e-16!659;UBERON:0000062!5.92e-14!511;UBERON:0000467!4.52e-13!625;UBERON:0000480!7.58e-13!626;UBERON:0000475!1.19e-12!365;UBERON:0001017!1.99e-12!82;UBERON:0005743!1.03e-11!86;UBERON:0001049!1.50e-11!57;UBERON:0005068!1.50e-11!57;UBERON:0006241!1.50e-11!57;UBERON:0007135!1.50e-11!57;UBERON:0002616!8.65e-10!59;UBERON:0000922!1.86e-09!612;UBERON:0000955!1.98e-09!69;UBERON:0006238!1.98e-09!69;UBERON:0000073!5.15e-09!94;UBERON:0001016!5.15e-09!94;UBERON:0002050!6.78e-09!605;UBERON:0005423!6.78e-09!605;UBERON:0000481!1.01e-08!347;UBERON:0003075!1.04e-08!86;UBERON:0007284!1.04e-08!86;UBERON:0000923!1.12e-08!604;UBERON:0005291!1.12e-08!604;UBERON:0006598!1.12e-08!604;UBERON:0002532!1.12e-08!604;UBERON:0001893!2.11e-08!34;UBERON:0002020!3.00e-08!34;UBERON:0003528!3.00e-08!34;UBERON:0003080!3.61e-08!42;UBERON:0000153!4.12e-08!129;UBERON:0007811!4.12e-08!129;UBERON:0002791!4.41e-08!33;UBERON:0000033!4.58e-08!123;UBERON:0002780!8.39e-08!41;UBERON:0001890!8.39e-08!41;UBERON:0006240!8.39e-08!41;UBERON:0002346!9.18e-08!90;UBERON:0004121!1.22e-07!169;UBERON:0001869!1.27e-07!32;UBERON:0000477!1.72e-07!286;UBERON:0004111!4.13e-07!241;UBERON:0000924!4.66e-07!173;UBERON:0006601!4.66e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.30e-09;34!UBERON:0003528;1.67e-08;34!UBERON:0002020;1.67e-08;34!UBERON:0001869;2.45e-08;32!UBERON:0007023;2.61e-08;114!UBERON:0002791;3.45e-08;32!UBERON:0002780;4.62e-07;41!UBERON:0001890;4.62e-07;41!UBERON:0000073;8.49e-07;53!UBERON:0002616;8.49e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.29e-32,114;UBERON:0001049,2.99e-13,56;UBERON:0005068,2.99e-13,56;UBERON:0006241,2.99e-13,56;UBERON:0007135,2.99e-13,56;UBERON:0000073,1.01e-11,53;UBERON:0002616,1.01e-11,53;UBERON:0001017,1.25e-11,81;UBERON:0010314,1.20e-10,132;UBERON:0003075,2.67e-10,82;UBERON:0007284,2.67e-10,82;UBERON:0001893,3.28e-10,34;UBERON:0003528,5.23e-10,34;UBERON:0002020,5.23e-10,34;UBERON:0002780,9.87e-10,41;UBERON:0001890,9.87e-10,41;UBERON:0003080,9.87e-10,41;UBERON:0006240,9.87e-10,41;UBERON:0002346,1.35e-09,86;UBERON:0001869,3.62e-09,32;UBERON:0002791,4.29e-09,32;UBERON:0001016,5.49e-09,89;UBERON:0010371,8.28e-09,104;UBERON:0000955,9.53e-09,68;UBERON:0006238,9.53e-09,68;UBERON:0011216,8.63e-08,223;UBERON:0004121,8.97e-07,171;UBERON:0000924,8.97e-07,171;UBERON:0006601,8.97e-07,171 | |||
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| ||
|short_description=p5@PPAP2B | |||
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Latest revision as of 16:09, 18 September 2015
Short description: | p5@PPAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PPAP2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 306bp_to_ENST00000371250_5end |
EntrezGene: | PPAP2B |
HGNC: | 9229 |
UniProt: | O14495 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.12e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.29e-32 | 114 |
neural tube | 2.99e-13 | 56 |
neural rod | 2.99e-13 | 56 |
future spinal cord | 2.99e-13 | 56 |
neural keel | 2.99e-13 | 56 |
regional part of nervous system | 1.01e-11 | 53 |
regional part of brain | 1.01e-11 | 53 |
central nervous system | 1.25e-11 | 81 |
structure with developmental contribution from neural crest | 1.20e-10 | 132 |
neural plate | 2.67e-10 | 82 |
presumptive neural plate | 2.67e-10 | 82 |
telencephalon | 3.28e-10 | 34 |
brain grey matter | 5.23e-10 | 34 |
gray matter | 5.23e-10 | 34 |
regional part of forebrain | 9.87e-10 | 41 |
forebrain | 9.87e-10 | 41 |
anterior neural tube | 9.87e-10 | 41 |
future forebrain | 9.87e-10 | 41 |
neurectoderm | 1.35e-09 | 86 |
cerebral hemisphere | 3.62e-09 | 32 |
regional part of telencephalon | 4.29e-09 | 32 |
nervous system | 5.49e-09 | 89 |
ecto-epithelium | 8.28e-09 | 104 |
brain | 9.53e-09 | 68 |
future brain | 9.53e-09 | 68 |
organ system subdivision | 8.63e-08 | 223 |
ectoderm-derived structure | 8.97e-07 | 171 |
ectoderm | 8.97e-07 | 171 |
presumptive ectoderm | 8.97e-07 | 171 |