FFCP PHASE1:Hg19::chr2:85555385..85555424,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10618 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15450 | |||
|TSSclassifier=strong | |||
|UniProt=O43493 | |||
|association_with_transcript=0bp_to_NM_001206840,NM_001206841,NM_001206844,NM_006464_5end | |||
|cluster_id=chr2:85555385..85555424,- | |||
|description=CAGE_peak_3_at_TGOLN2_5end | |||
|id=chr2:85555385..85555424,- | |||
|ontology_enrichment_celltype=CL:0000766!3.62e-29!76;CL:0000557!5.01e-28!71;CL:0002009!3.56e-26!65;CL:0002057!3.79e-25!42;CL:0002194!5.35e-25!63;CL:0000576!5.35e-25!63;CL:0000040!5.35e-25!63;CL:0000559!5.35e-25!63;CL:0000839!6.70e-25!70;CL:0000860!4.42e-23!45;CL:0000738!1.52e-22!140;CL:0002031!2.37e-19!124;CL:0002087!1.50e-18!119;CL:0000763!7.54e-18!112;CL:0000049!7.54e-18!112;CL:0000037!1.06e-15!172;CL:0000566!1.06e-15!172;CL:0002032!4.60e-15!165;CL:0000837!4.60e-15!165;CL:0000988!2.30e-13!182;CL:0000134!2.80e-11!358;CL:0002320!6.85e-10!365;CL:0000048!2.14e-09!430;CL:0000723!2.82e-08!436;CL:0000034!1.25e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-22;33!CL:0002057;1.14e-22;33!CL:0000473;2.65e-20;39!CL:0000234;2.65e-20;39!CL:0000576;2.33e-19;48!CL:0000766;1.31e-15;69!CL:0002087;8.73e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.25e-35,72;CL:0000557,3.02e-33,67;CL:0002009,3.93e-31,61;CL:0000473,3.50e-30,48;CL:0000234,3.50e-30,48;CL:0000839,6.19e-30,66;CL:0002194,9.60e-30,59;CL:0000576,9.60e-30,59;CL:0000040,9.60e-30,59;CL:0000559,9.60e-30,59;CL:0000860,5.47e-29,42;CL:0002057,5.47e-29,42;CL:0000738,2.41e-25,136;CL:0000763,1.31e-21,108;CL:0000049,1.31e-21,108;CL:0002031,4.97e-21,120;CL:0002087,5.74e-20,115;CL:0000037,1.13e-17,168;CL:0002032,8.47e-17,161;CL:0000837,8.47e-17,161;CL:0000988,2.58e-15,177;CL:0000134,1.62e-13,354;CL:0002320,2.16e-12,361;CL:0000048,7.43e-11,427;CL:0000723,7.44e-10,433;CL:0000034,2.36e-09,441;CL:0000219,3.41e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.12e-21;42!CL:0000049;4.84e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.90e-29!102;UBERON:0003061!2.90e-29!102;UBERON:0002193!1.59e-26!112;UBERON:0002371!1.96e-25!80;UBERON:0002405!1.20e-22!115;UBERON:0001474!4.46e-22!86;UBERON:0004765!4.14e-18!101;UBERON:0001434!4.14e-18!101;UBERON:0003081!8.74e-15!216;UBERON:0007023!2.84e-13!115;UBERON:0002204!5.20e-12!167;UBERON:0002384!2.07e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.99e-32,98;UBERON:0003061,1.99e-32,98;UBERON:0002193,3.47e-29,108;UBERON:0002371,1.41e-28,76;UBERON:0002405,1.04e-25,93;UBERON:0001474,2.08e-25,82;UBERON:0004765,2.81e-22,90;UBERON:0003081,3.42e-19,203;UBERON:0001434,9.19e-19,100;UBERON:0007023,8.42e-13,114;UBERON:0002384,4.90e-12,371;UBERON:0002204,2.64e-11,167;UBERON:0000926,2.61e-10,315;UBERON:0004120,2.61e-10,315;UBERON:0006603,2.61e-10,315 | |||
|phase1_expression=1.2717486548939,4.06790995392868,1.9733616573436,2.00146596706261,2.23480547213644,0,0,1.89515962028049,1.56711376919903,1.22866968250754,0.697801167972428,0.218441372130172,0.527533956456907,0.247532705920093,1.32558950291166,4.03395087871065,0.602694528023977,1.46062018077475,0.975865597581014,1.23121058076788,0.408001382488506,0.313454721478088,0.286235987131057,1.36874425072884,0.502170558379211,0.687720651731561,0.985207073399349,0.865818594450472,6.29382842958246,3.0706351847777,3.71558695958582,0.919421224478927,0.90361775633475,0,0.46480320348181,0,1.17440175733939,6.64794490238253,11.0299446108578,10.199510923645,3.35873211359887,4.53451132426571,10.5605982730016,7.56070841653736,10.5805264232867,6.54976965207104,11.1565937714729,13.1573724166984,7.12324653058738,8.63077176966451,7.42866048934392,5.20260905754887,6.55016793399575,5.80936215225443,5.41705946377367,10.1650863353007,4.63940455098338,6.29225756446237,10.4068523406107,8.02322567690234,12.1474053901818,12.2044981069085,7.97854630486527,5.54092175692502,8.41606792022894,17.0215567407342,8.71951148593805,8.29120595347253,7.30076085788282,6.08128765174327,8.47559303686716,6.99727508376373,6.96217252369946,4.01385043992689,2.55125159958052,2.51590374610051,4.26848798356681,3.45406853535464,4.66104201421532,2.85012743741249,3.9783335439818,2.00930569141097,0,1.63841583378639,6.22656477704488,2.13365111283254,1.20118796110804,0.574752439954483,3.30522436392431,0.954053754535364,2.27685187643779,1.76171156811282,3.82273228125229,0,4.48406850385229,2.10707267820062,2.360517241366,2.75107533924415,1.43921049299656,1.83905144929746,1.62961133316795,3.78758244587787,0,1.55974639639243,2.65145316727353,2.87994062958707,3.24964636518019,1.92136979588513,1.30059347559878,1.31550323682941,1.38175008892924,0.579606171470105,0.889719378972363,0.535081656179426,1.04535523804977,1.0197840842781,1.53288197440768,1.37450978193052,1.51811815211702,0.318565414324097,0,0.950452044448374,1.20460095262218,0.76791966692651,2.49861453104692,1.65744076430812,0.821127996921047,2.01606743224732,3.4767225451856,3.33096128930438,2.43806866313962,2.01210257911091,0.511450247374121,1.44575660953827,1.50401373190767,0.869079113764942,1.5905718941022,1.45990461090791,0.472674085820339,1.10864698731282,0.614843499851882,2.5540919722054,0,0,4.21911611751088,4.70150290708022,4.65352861816028,1.43094374583205,0.571994910780128,2.60020250930695,0.79504962946682,0.860234595106124,0.694281003215189,1.69592382577203,2.51699661725944,0,0.835979866147242,1.03366703667732,1.77883131343355,0,2.41697590265488,0,1.22031028774085,0.735326160691737,3.24056779152704,0.446498641420399,0.44905874525234,0.675668882899933,0,1.89853131913626,0.549605231791222,6.58902087180316,0,0,0.496971951695318,1.01304409331664,1.72131935057184,7.17091551872034,1.77334191099179,1.12135520028461,0,1.72667283892012,1.55605517699883,0.538842688278752,0.817309515567294,1.05950199351452,0.576175924479999,0.70296429550139,0.312160076830321,0,0.149448680551801,0.587172493218824,0,0.842704840213491,0.204154171254893,0.122834317311768,0.619954687054593,0,1.23633464639278,0,0.718618141816238,0.336672227908132,0.750711119231785,0.554128230968366,0.438977620880838,0,1.80285670687916,1.36118619792025,2.69084453533293,2.34913127700424,0.847727604638247,3.60109315301283,0.824420233907511,1.28820270022815,0.930584281657949,2.70042131586026,1.26668106709558,2.01947019395292,1.38074847963449,0.646584227275248,4.26011511019937,2.21654616100809,1.01736355386293,1.15956511897978,0.818238361772504,1.72082757233402,0.121973706129595,0.397589304964456,0,0.518305275076852,0.504641701751257,0,1.56449532329816,1.28648187638577,1.38134921352481,1.39310378409594,0.721879481669586,0.354920400119532,0.168584690078102,0.241011029883482,0.55146986366197,0.435758888184812,0.237270619111097,0.674156540800822,0.392442930250692,0,1.4763109092493,0,1.2347220339942,0,6.33775174109154,4.91413608338813,9.45263850690247,0,0.860919069801795,0.686271241194102,0.219500570817251,0,0,0.185176890317059,0.651616610620649,0,1.44331342025273,0.579652024875384,1.52631302506568,1.58803092537181,0.925971025153221,1.90254152234598,1.58040879591855,0,3.20082107913617,5.14809383306323,4.16167254408439,1.87467667973554,1.34385702559088,0.850650583454319,0.447792613514241,0.290633938513962,0.766765358330422,1.97065295158377,2.81754988842323,2.28060927094849,1.72943944100354,3.28230326908588,0.63497894292169,0.763976851116555,0,0,0.308482478109971,0.600686115687835,0.571652865261156,0.448524337381443,1.30788020649984,0.36669142910475,2.45616259939778,7.15312891703765,0,0.797814349754612,0,0.771622122786426,0,0.799266537048298,0.285955987316295,0,0.823240336780769,0,0,1.58390374586686,1.80863626235752,0.871533458600294,3.19913571782583,0,4.52031382288914,2.10833939483032,0.479249710983165,1.14861935834114,0,2.46128221334885,0.61642896765115,1.43248770591916,0.672510863961164,2.75843064282698,1.94064817373566,5.64709359630893,0.508189248444927,0,1.546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| |||
|short_description=p3@TGOLN2 | |||
}} |
Latest revision as of 15:59, 18 September 2015
Short description: | p3@TGOLN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TGOLN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001206840, NM_001206841, NM_001206844, NM_006464_5end |
EntrezGene: | TGOLN2 |
HGNC: | 15450 |
UniProt: | O43493 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.25e-35 | 72 |
granulocyte monocyte progenitor cell | 3.02e-33 | 67 |
macrophage dendritic cell progenitor | 3.93e-31 | 61 |
defensive cell | 3.50e-30 | 48 |
phagocyte | 3.50e-30 | 48 |
myeloid lineage restricted progenitor cell | 6.19e-30 | 66 |
monopoietic cell | 9.60e-30 | 59 |
monocyte | 9.60e-30 | 59 |
monoblast | 9.60e-30 | 59 |
promonocyte | 9.60e-30 | 59 |
classical monocyte | 5.47e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.47e-29 | 42 |
leukocyte | 2.41e-25 | 136 |
myeloid cell | 1.31e-21 | 108 |
common myeloid progenitor | 1.31e-21 | 108 |
hematopoietic lineage restricted progenitor cell | 4.97e-21 | 120 |
nongranular leukocyte | 5.74e-20 | 115 |
hematopoietic stem cell | 1.13e-17 | 168 |
hematopoietic oligopotent progenitor cell | 8.47e-17 | 161 |
hematopoietic multipotent progenitor cell | 8.47e-17 | 161 |
hematopoietic cell | 2.58e-15 | 177 |
mesenchymal cell | 1.62e-13 | 354 |
connective tissue cell | 2.16e-12 | 361 |
multi fate stem cell | 7.43e-11 | 427 |
somatic stem cell | 7.44e-10 | 433 |
stem cell | 2.36e-09 | 441 |
motile cell | 3.41e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.99e-32 | 98 |
blood island | 1.99e-32 | 98 |
hemolymphoid system | 3.47e-29 | 108 |
bone marrow | 1.41e-28 | 76 |
immune system | 1.04e-25 | 93 |
bone element | 2.08e-25 | 82 |
skeletal element | 2.81e-22 | 90 |
lateral plate mesoderm | 3.42e-19 | 203 |
skeletal system | 9.19e-19 | 100 |
adult organism | 8.42e-13 | 114 |
connective tissue | 4.90e-12 | 371 |
musculoskeletal system | 2.64e-11 | 167 |
mesoderm | 2.61e-10 | 315 |
mesoderm-derived structure | 2.61e-10 | 315 |
presumptive mesoderm | 2.61e-10 | 315 |