FFCP PHASE1:Hg19::chr12:49582978..49582985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7846 | |EntrezGene=7846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20766 | |HGNC=20766 | ||
|TSSclassifier=strong | |||
|UniProt=F8VYI2 | |UniProt=F8VYI2 | ||
|association_with_transcript=-115bp_to_ENST00000548302_5end | |association_with_transcript=-115bp_to_ENST00000548302_5end | ||
|cluster_id=chr12:49582978..49582985,- | |||
|description=CAGE_peak_4_at_TUBA1A_5end | |description=CAGE_peak_4_at_TUBA1A_5end | ||
|id=chr12:49582978..49582985,- | |id=chr12:49582978..49582985,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.57e-07,36;CL:0002139,8.28e-07,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.38e-27!115;UBERON:0000025!2.45e-07!194;UBERON:0001049!3.46e-07!57;UBERON:0005068!3.46e-07!57;UBERON:0006241!3.46e-07!57;UBERON:0007135!3.46e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!6.38e-27!115;UBERON:0000025!2.45e-07!194;UBERON:0001049!3.46e-07!57;UBERON:0005068!3.46e-07!57;UBERON:0006241!3.46e-07!57;UBERON:0007135!3.46e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.33e-07;114 | |ontology_enrichment_uberon_v019=UBERON:0007023;3.33e-07;114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.09e-28,114;UBERON:0000025,3.20e-08,192;UBERON:0001049,3.59e-08,56;UBERON:0005068,3.59e-08,56;UBERON:0006241,3.59e-08,56;UBERON:0007135,3.59e-08,56;UBERON:0000073,1.24e-07,53;UBERON:0002616,1.24e-07,53 | |||
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| ||
|short_description=p4@TUBA1A | |short_description=p4@TUBA1A | ||
}} | }} |
Latest revision as of 15:58, 18 September 2015
Short description: | p4@TUBA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TUBA1A_5end |
Coexpression cluster: | NA |
Association with transcript: | -115bp_to_ENST00000548302_5end |
EntrezGene: | TUBA1A |
HGNC: | 20766 |
UniProt: | F8VYI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.57e-07 | 36 |
endothelial cell of vascular tree | 8.28e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.09e-28 | 114 |
tube | 3.20e-08 | 192 |
neural tube | 3.59e-08 | 56 |
neural rod | 3.59e-08 | 56 |
future spinal cord | 3.59e-08 | 56 |
neural keel | 3.59e-08 | 56 |
regional part of nervous system | 1.24e-07 | 53 |
regional part of brain | 1.24e-07 | 53 |