FFCP PHASE1:Hg19::chr11:61129723..61129776,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23014 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NBI2,F5H121,B4DLN9 | |||
|association_with_transcript=0bp_to_ENST00000294072,ENST00000426130,ENST00000536687,ENST00000537680,NM_001161454,NM_153611,uc001nrg.2,uc001nrh.2,uc001nri.2,uc001nrk.2,uc009ynn.2,uc010rlh.1_5end | |||
|cluster_id=chr11:61129723..61129776,- | |||
|description=CAGE_peak_2_at_CYBASC3_5end | |||
|id=chr11:61129723..61129776,- | |||
|ontology_enrichment_celltype=CL:0002371!7.17e-23!591;CL:0000144!4.52e-17!625;CL:0000860!3.64e-15!45;CL:0002057!1.07e-14!42;CL:0000003!1.32e-14!722;CL:0002194!3.61e-14!63;CL:0000576!3.61e-14!63;CL:0000040!3.61e-14!63;CL:0000559!3.61e-14!63;CL:0000548!1.26e-13!679;CL:0000004!1.26e-13!679;CL:0000255!1.26e-13!679;CL:0000723!1.64e-13!436;CL:0000012!1.84e-13!682;CL:0000048!1.93e-13!430;CL:0002009!2.98e-13!65;CL:0002320!6.46e-12!365;CL:0000034!6.76e-12!444;CL:0000839!1.78e-11!70;CL:0002087!3.27e-11!119;CL:0000063!4.89e-11!578;CL:0000557!6.63e-11!71;CL:0000766!1.29e-10!76;CL:0000134!2.64e-10!358;CL:0000738!2.95e-09!140;CL:0002031!3.10e-09!124;CL:0000219!4.08e-09!390;CL:0000115!1.62e-07!35;CL:0000988!2.40e-07!182;CL:0000037!6.03e-07!172;CL:0000566!6.03e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.27e-12;33!CL:0002057;8.27e-12;33!CL:0000473;2.05e-11;39!CL:0000234;2.05e-11;39!CL:0000576;9.66e-10;48!CL:0000115;6.55e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.11e-16,48;CL:0000234,1.11e-16,48;CL:0000860,1.07e-14,42;CL:0002057,1.07e-14,42;CL:0002194,1.13e-13,59;CL:0000576,1.13e-13,59;CL:0000040,1.13e-13,59;CL:0000559,1.13e-13,59;CL:0002009,9.65e-13,61;CL:0000723,1.27e-12,433;CL:0000048,1.48e-12,427;CL:0002320,3.32e-11,361;CL:0000034,4.56e-11,441;CL:0000839,5.99e-11,66;CL:0002087,1.12e-10,115;CL:0000557,2.23e-10,67;CL:0000766,4.37e-10,72;CL:0000134,1.19e-09,354;CL:0000738,9.28e-09,136;CL:0002031,9.86e-09,120;CL:0000219,1.68e-08,386;CL:0000115,7.90e-08,36 | |||
|ontology_enrichment_development_v019=CL:0002057;4.76e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.70e-18,203;UBERON:0000926,1.91e-13,315;UBERON:0004120,1.91e-13,315;UBERON:0006603,1.91e-13,315;UBERON:0002405,4.13e-11,93;UBERON:0002204,7.86e-11,167;UBERON:0002371,1.55e-10,76;UBERON:0002193,2.85e-10,108;UBERON:0004765,9.61e-10,90;UBERON:0002384,2.27e-09,371;UBERON:0002390,3.56e-09,98;UBERON:0003061,3.56e-09,98;UBERON:0001434,6.52e-09,100;UBERON:0002049,4.68e-08,78;UBERON:0007798,4.68e-08,78;UBERON:0001474,4.87e-08,82;UBERON:0000055,8.56e-08,68;UBERON:0004872,1.76e-07,83;UBERON:0004535,1.80e-07,109;UBERON:0001637,2.56e-07,42;UBERON:0003509,2.56e-07,42;UBERON:0004572,2.56e-07,42;UBERON:0001009,3.42e-07,112;UBERON:0007500,8.08e-07,59;UBERON:0001981,8.08e-07,59;UBERON:0004537,8.08e-07,59;UBERON:0006965,8.08e-07,59 | |||
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| |||
|short_description=p2@CYBASC3 | |||
}} |
Latest revision as of 15:55, 18 September 2015
Short description: | p2@CYBASC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CYBASC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000294072, ENST00000426130, ENST00000536687, ENST00000537680, NM_001161454, NM_153611, uc001nrg.2, uc001nrh.2, uc001nri.2, uc001nrk.2, uc009ynn.2, uc010rlh.1_5end |
EntrezGene: | CYBASC3 |
HGNC: | 23014 |
UniProt: | Q8NBI2F5H121B4DLN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.11e-16 | 48 |
phagocyte | 1.11e-16 | 48 |
classical monocyte | 1.07e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-14 | 42 |
monopoietic cell | 1.13e-13 | 59 |
monocyte | 1.13e-13 | 59 |
monoblast | 1.13e-13 | 59 |
promonocyte | 1.13e-13 | 59 |
macrophage dendritic cell progenitor | 9.65e-13 | 61 |
somatic stem cell | 1.27e-12 | 433 |
multi fate stem cell | 1.48e-12 | 427 |
connective tissue cell | 3.32e-11 | 361 |
stem cell | 4.56e-11 | 441 |
myeloid lineage restricted progenitor cell | 5.99e-11 | 66 |
nongranular leukocyte | 1.12e-10 | 115 |
granulocyte monocyte progenitor cell | 2.23e-10 | 67 |
myeloid leukocyte | 4.37e-10 | 72 |
mesenchymal cell | 1.19e-09 | 354 |
leukocyte | 9.28e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 9.86e-09 | 120 |
motile cell | 1.68e-08 | 386 |
endothelial cell | 7.90e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.70e-18 | 203 |
mesoderm | 1.91e-13 | 315 |
mesoderm-derived structure | 1.91e-13 | 315 |
presumptive mesoderm | 1.91e-13 | 315 |
immune system | 4.13e-11 | 93 |
musculoskeletal system | 7.86e-11 | 167 |
bone marrow | 1.55e-10 | 76 |
hemolymphoid system | 2.85e-10 | 108 |
skeletal element | 9.61e-10 | 90 |
connective tissue | 2.27e-09 | 371 |
hematopoietic system | 3.56e-09 | 98 |
blood island | 3.56e-09 | 98 |
skeletal system | 6.52e-09 | 100 |
vasculature | 4.68e-08 | 78 |
vascular system | 4.68e-08 | 78 |
bone element | 4.87e-08 | 82 |
vessel | 8.56e-08 | 68 |
splanchnic layer of lateral plate mesoderm | 1.76e-07 | 83 |
cardiovascular system | 1.80e-07 | 109 |
artery | 2.56e-07 | 42 |
arterial blood vessel | 2.56e-07 | 42 |
arterial system | 2.56e-07 | 42 |
circulatory system | 3.42e-07 | 112 |
epithelial tube open at both ends | 8.08e-07 | 59 |
blood vessel | 8.08e-07 | 59 |
blood vasculature | 8.08e-07 | 59 |
vascular cord | 8.08e-07 | 59 |