FFCP PHASE1:Hg19::chr12:49580269..49580316,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7846 | |EntrezGene=7846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20766 | |HGNC=20766 | ||
|TSSclassifier=strong | |||
|UniProt=Q71U36 | |UniProt=Q71U36 | ||
|association_with_transcript=-129bp_to_K00557_5end | |association_with_transcript=-129bp_to_K00557_5end | ||
|cluster_id=chr12:49580269..49580316,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_14_at_TUBA1A_5end | |description=CAGE_peak_14_at_TUBA1A_5end | ||
|id=chr12:49580269..49580316,- | |id=chr12:49580269..49580316,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;6.30e-31;5!CL:0000775;3.29e-23;3!CL:0000094;2.73e-19;8!CL:0000511;1.03e-17;1!CL:0002625;1.03e-17;1!CL:0000216;1.03e-17;1!CL:0000163;1.62e-17;9!CL:0000081;3.22e-14;11!CL:0000047;1.57e-09;2!CL:0000771;1.57e-09;2!CL:0000151;3.69e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.31e-31,5;CL:0002028,6.31e-31,5;CL:0000775,3.29e-23,3;CL:0000094,2.57e-19,8;CL:0000511,6.23e-18,1;CL:0002625,6.23e-18,1;CL:0000216,6.23e-18,1;CL:0000163,1.62e-17,9;CL:0000081,3.08e-14,11;CL:0000771,1.44e-09,2;CL:0000047,3.86e-09,8;CL:0000766,4.58e-08,72;CL:0000151,8.80e-08,36;CL:0000738,3.49e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.96e-07!94;UBERON:0001016!1.96e-07!94;UBERON:0001049!9.49e-07!57;UBERON:0005068!9.49e-07!57;UBERON:0006241!9.49e-07!57;UBERON:0007135!9.49e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.03e-17;1!UBERON:0001343;1.03e-17;1!UBERON:0004910;1.03e-17;1!UBERON:0004813;1.03e-17;1!UBERON:0004909;1.57e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.23e-18,1;UBERON:0001343,6.23e-18,1;UBERON:0004910,6.23e-18,1;UBERON:0005154,6.23e-18,1;UBERON:0005295,6.23e-18,1;UBERON:0004813,6.23e-18,1;UBERON:0005297,6.23e-18,1;UBERON:0005294,6.23e-18,1;UBERON:0010141,6.23e-18,1;UBERON:0005891,6.23e-18,1;UBERON:0004909,1.22e-09,2 | |||
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| ||
|short_description=p14@TUBA1A | |short_description=p14@TUBA1A | ||
}} | }} |
Latest revision as of 15:51, 18 September 2015
Short description: | p14@TUBA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TUBA1A_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -129bp_to_K00557_5end |
EntrezGene: | TUBA1A |
HGNC: | 20766 |
UniProt: | Q71U36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.31e-31 | 5 |
basophil mast progenitor cell | 6.31e-31 | 5 |
neutrophil | 3.29e-23 | 3 |
granulocyte | 2.57e-19 | 8 |
androgen binding protein secreting cell | 6.23e-18 | 1 |
seminiferous tubule epithelial cell | 6.23e-18 | 1 |
Sertoli cell | 6.23e-18 | 1 |
endocrine cell | 1.62e-17 | 9 |
blood cell | 3.08e-14 | 11 |
eosinophil | 1.44e-09 | 2 |
neuronal stem cell | 3.86e-09 | 8 |
myeloid leukocyte | 4.58e-08 | 72 |
secretory cell | 8.80e-08 | 36 |
leukocyte | 3.49e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.23e-18 | 1 |
seminiferous tubule of testis | 6.23e-18 | 1 |
epithelium of male gonad | 6.23e-18 | 1 |
epithelial cord | 6.23e-18 | 1 |
sex cord | 6.23e-18 | 1 |
seminiferous tubule epithelium | 6.23e-18 | 1 |
testis sex cord | 6.23e-18 | 1 |
genital ridge | 6.23e-18 | 1 |
primitive sex cord of indifferent gonad | 6.23e-18 | 1 |
coelomic epithelium | 6.23e-18 | 1 |
epithelium of gonad | 1.22e-09 | 2 |