FFCP PHASE1:Hg19::chr8:59572301..59572435,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:59572301..59572435,- to FFCP PHASE1:Hg19::chr8:59572301..59572435,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8439 | |EntrezGene=8439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |HGNC=8017 | ||
|TSSclassifier=strong | |||
|UniProt=Q92636 | |UniProt=Q92636 | ||
|association_with_transcript=0bp_to_ENST00000038176,NM_003580,uc003xtt.2,uc003xtu.2_5end | |||
|cluster_id=chr8:59572301..59572435,- | |||
|description=CAGE_peak_1_at_NSMAF_5end | |||
|id=chr8:59572301..59572435,- | |||
|ontology_enrichment_celltype=CL:0000134!6.15e-22!358;CL:0002320!2.86e-20!365;CL:0000763!4.69e-20!112;CL:0000049!4.69e-20!112;CL:0000557!1.77e-18!71;CL:0000037!8.06e-18!172;CL:0000566!8.06e-18!172;CL:0000219!3.96e-17!390;CL:0002009!5.29e-17!65;CL:0002194!1.11e-16!63;CL:0000576!1.11e-16!63;CL:0000040!1.11e-16!63;CL:0000559!1.11e-16!63;CL:0002032!4.14e-16!165;CL:0000837!4.14e-16!165;CL:0000839!1.08e-15!70;CL:0000988!1.47e-15!182;CL:0002057!3.41e-14!42;CL:0000048!4.99e-14!430;CL:0000860!1.96e-13!45;CL:0000766!2.54e-13!76;CL:0000723!5.54e-13!436;CL:0002087!4.03e-12!119;CL:0002031!7.92e-12!124;CL:0000034!9.04e-12!444;CL:0000738!5.09e-11!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-15;33!CL:0002057;1.48e-15;33!CL:0000473;2.10e-13;39!CL:0000234;2.10e-13;39!CL:0000576;3.48e-10;48!CL:0000763;9.92e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000134,7.71e-22,354;CL:0000763,3.02e-20,108;CL:0000049,3.02e-20,108;CL:0002320,3.62e-20,361;CL:0000557,6.44e-19,67;CL:0000037,8.22e-18,168;CL:0002009,1.88e-17,61;CL:0002194,3.85e-17,59;CL:0000576,3.85e-17,59;CL:0000040,3.85e-17,59;CL:0000559,3.85e-17,59;CL:0000219,5.17e-17,386;CL:0002032,4.26e-16,161;CL:0000837,4.26e-16,161;CL:0000839,4.94e-16,66;CL:0000988,2.05e-15,177;CL:0000473,1.11e-14,48;CL:0000234,1.11e-14,48;CL:0000860,3.41e-14,42;CL:0002057,3.41e-14,42;CL:0000048,4.62e-14,427;CL:0000766,1.57e-13,72;CL:0000723,5.17e-13,433;CL:0002087,3.83e-12,115;CL:0002031,7.77e-12,120;CL:0000034,8.51e-12,441;CL:0000738,5.41e-11,136 | |||
|ontology_enrichment_development_v019=CL:0002057;6.02e-11;42 | |||
|ontology_enrichment_disease=DOID:8692!4.39e-11!31;DOID:1240!1.19e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.14e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.39e-11,31;DOID:1240,1.19e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.46e-21!375;UBERON:0002371!8.63e-19!80;UBERON:0002390!3.49e-17!102;UBERON:0003061!3.49e-17!102;UBERON:0001474!3.57e-17!86;UBERON:0004765!8.05e-16!101;UBERON:0001434!8.05e-16!101;UBERON:0002193!1.21e-14!112;UBERON:0002405!2.37e-09!115;UBERON:0002204!5.66e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.17e-21,371;UBERON:0002371,3.75e-19,76;UBERON:0001474,1.95e-17,82;UBERON:0002390,2.33e-17,98;UBERON:0003061,2.33e-17,98;UBERON:0002405,9.94e-17,93;UBERON:0001434,1.94e-15,100;UBERON:0002193,9.97e-15,108;UBERON:0004765,7.98e-14,90;UBERON:0002204,7.76e-09,167 | |||
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| ||
|short_description=p1@NSMAF | |||
}} | }} |
Latest revision as of 15:48, 18 September 2015
Short description: | p1@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NSMAF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000038176, NM_003580, uc003xtt.2, uc003xtu.2_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | Q92636 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal cell | 7.71e-22 | 354 |
myeloid cell | 3.02e-20 | 108 |
common myeloid progenitor | 3.02e-20 | 108 |
connective tissue cell | 3.62e-20 | 361 |
granulocyte monocyte progenitor cell | 6.44e-19 | 67 |
hematopoietic stem cell | 8.22e-18 | 168 |
macrophage dendritic cell progenitor | 1.88e-17 | 61 |
monopoietic cell | 3.85e-17 | 59 |
monocyte | 3.85e-17 | 59 |
monoblast | 3.85e-17 | 59 |
promonocyte | 3.85e-17 | 59 |
motile cell | 5.17e-17 | 386 |
hematopoietic oligopotent progenitor cell | 4.26e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.26e-16 | 161 |
myeloid lineage restricted progenitor cell | 4.94e-16 | 66 |
hematopoietic cell | 2.05e-15 | 177 |
defensive cell | 1.11e-14 | 48 |
phagocyte | 1.11e-14 | 48 |
classical monocyte | 3.41e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.41e-14 | 42 |
multi fate stem cell | 4.62e-14 | 427 |
myeloid leukocyte | 1.57e-13 | 72 |
somatic stem cell | 5.17e-13 | 433 |
nongranular leukocyte | 3.83e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 7.77e-12 | 120 |
stem cell | 8.51e-12 | 441 |
leukocyte | 5.41e-11 | 136 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.17e-21 | 371 |
bone marrow | 3.75e-19 | 76 |
bone element | 1.95e-17 | 82 |
hematopoietic system | 2.33e-17 | 98 |
blood island | 2.33e-17 | 98 |
immune system | 9.94e-17 | 93 |
skeletal system | 1.94e-15 | 100 |
hemolymphoid system | 9.97e-15 | 108 |
skeletal element | 7.98e-14 | 90 |
musculoskeletal system | 7.76e-09 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.39e-11 | 31 |
leukemia | 1.19e-08 | 39 |