FFCP PHASE1:Hg19::chr15:66085003..66085017,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10260 | |EntrezGene=10260 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24321 | |HGNC=24321 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z401,E7EPL3,Q05C90 | |UniProt=Q7Z401,E7EPL3,Q05C90 | ||
|association_with_transcript=-372bp_to_ENST00000431932,ENST00000443035,NM_001144823,NM_005848,uc002aph.2,uc002api.2,uc002apj.3,uc010ujj.1_5end | |association_with_transcript=-372bp_to_ENST00000431932,ENST00000443035,NM_001144823,NM_005848,uc002aph.2,uc002api.2,uc002apj.3,uc010ujj.1_5end | ||
|cluster_id=chr15:66085003..66085017,- | |||
|coexpression_cluster_id=C8 | |coexpression_cluster_id=C8 | ||
|description=CAGE_peak_5_at_DENND4A_5end | |description=CAGE_peak_5_at_DENND4A_5end | ||
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|ontology_enrichment_celltype=CL:0000738!1.25e-67!140;CL:0000037!1.60e-54!172;CL:0000566!1.60e-54!172;CL:0000988!5.75e-53!182;CL:0002031!8.86e-51!124;CL:0002087!1.50e-48!119;CL:0002032!1.73e-46!165;CL:0000837!1.73e-46!165;CL:0000838!3.49e-35!52;CL:0000542!2.85e-34!53;CL:0000051!2.85e-34!53;CL:0000945!8.96e-22!24;CL:0000826!8.96e-22!24;CL:0002057!1.01e-19!42;CL:0000766!1.04e-19!76;CL:0000860!7.68e-18!45;CL:0000557!1.40e-16!71;CL:0000763!3.97e-16!112;CL:0000049!3.97e-16!112;CL:0000839!2.18e-15!70;CL:0002009!3.66e-15!65;CL:0000134!4.60e-15!358;CL:0002320!2.71e-14!365;CL:0000451!1.01e-13!10;CL:0002194!2.82e-13!63;CL:0000576!2.82e-13!63;CL:0000040!2.82e-13!63;CL:0000559!2.82e-13!63;CL:0000219!4.16e-12!390;CL:0000084!3.68e-11!25;CL:0000827!3.68e-11!25;CL:0000990!1.05e-10!8;CL:0000048!2.82e-10!430;CL:0000624!3.13e-10!6;CL:0000723!8.45e-10!436;CL:0000236!9.31e-10!14;CL:0000034!9.90e-10!444;CL:0000791!3.45e-09!18;CL:0000789!3.45e-09!18;CL:0002420!3.45e-09!18;CL:0002419!3.45e-09!18;CL:0000790!3.45e-09!18;CL:0000453!6.55e-09!5;CL:0002393!9.55e-08!9;CL:0002397!9.55e-08!9;CL:0000094!4.66e-07!8 | |ontology_enrichment_celltype=CL:0000738!1.25e-67!140;CL:0000037!1.60e-54!172;CL:0000566!1.60e-54!172;CL:0000988!5.75e-53!182;CL:0002031!8.86e-51!124;CL:0002087!1.50e-48!119;CL:0002032!1.73e-46!165;CL:0000837!1.73e-46!165;CL:0000838!3.49e-35!52;CL:0000542!2.85e-34!53;CL:0000051!2.85e-34!53;CL:0000945!8.96e-22!24;CL:0000826!8.96e-22!24;CL:0002057!1.01e-19!42;CL:0000766!1.04e-19!76;CL:0000860!7.68e-18!45;CL:0000557!1.40e-16!71;CL:0000763!3.97e-16!112;CL:0000049!3.97e-16!112;CL:0000839!2.18e-15!70;CL:0002009!3.66e-15!65;CL:0000134!4.60e-15!358;CL:0002320!2.71e-14!365;CL:0000451!1.01e-13!10;CL:0002194!2.82e-13!63;CL:0000576!2.82e-13!63;CL:0000040!2.82e-13!63;CL:0000559!2.82e-13!63;CL:0000219!4.16e-12!390;CL:0000084!3.68e-11!25;CL:0000827!3.68e-11!25;CL:0000990!1.05e-10!8;CL:0000048!2.82e-10!430;CL:0000624!3.13e-10!6;CL:0000723!8.45e-10!436;CL:0000236!9.31e-10!14;CL:0000034!9.90e-10!444;CL:0000791!3.45e-09!18;CL:0000789!3.45e-09!18;CL:0002420!3.45e-09!18;CL:0002419!3.45e-09!18;CL:0000790!3.45e-09!18;CL:0000453!6.55e-09!5;CL:0002393!9.55e-08!9;CL:0002397!9.55e-08!9;CL:0000094!4.66e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000451;1.35e-19;10!CL:0000542;3.42e-18;53!CL:0000453;2.06e-17;5!CL:0002087;2.05e-15;104!CL:0000624;4.46e-15;6!CL:0000945;4.48e-15;24!CL:0000990;1.33e-13;8!CL:0000738;6.59e-13;136!CL:0000623;1.96e-12;3!CL:0000791;5.70e-12;18!CL:0000789;5.70e-12;18!CL:0002419;5.70e-12;18!CL:0000784;8.50e-12;3!CL:0000226;1.13e-10;3!CL:0000842;1.13e-10;3!CL:0000084;2.59e-10;25!CL:0000236;3.27e-09;13!CL:0001014;2.00e-08;2!CL:0001016;2.00e-08;2!CL:0000771;3.45e-08;2!CL:0000081;1.19e-07;11!CL:0000860;1.43e-07;33!CL:0002057;1.43e-07;33!CL:0000988;1.95e-07;177!CL:0000094;4.34e-07;8 | |ontology_enrichment_celltype_v019=CL:0000451;1.35e-19;10!CL:0000542;3.42e-18;53!CL:0000453;2.06e-17;5!CL:0002087;2.05e-15;104!CL:0000624;4.46e-15;6!CL:0000945;4.48e-15;24!CL:0000990;1.33e-13;8!CL:0000738;6.59e-13;136!CL:0000623;1.96e-12;3!CL:0000791;5.70e-12;18!CL:0000789;5.70e-12;18!CL:0002419;5.70e-12;18!CL:0000784;8.50e-12;3!CL:0000226;1.13e-10;3!CL:0000842;1.13e-10;3!CL:0000084;2.59e-10;25!CL:0000236;3.27e-09;13!CL:0001014;2.00e-08;2!CL:0001016;2.00e-08;2!CL:0000771;3.45e-08;2!CL:0000081;1.19e-07;11!CL:0000860;1.43e-07;33!CL:0002057;1.43e-07;33!CL:0000988;1.95e-07;177!CL:0000094;4.34e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.52e-59,136;CL:0000037,3.23e-48,168;CL:0000988,3.00e-47,177;CL:0002087,9.90e-40,115;CL:0002032,3.34e-38,161;CL:0000837,3.34e-38,161;CL:0002031,6.51e-38,120;CL:0000838,1.02e-30,52;CL:0000542,5.04e-30,53;CL:0000051,5.04e-30,53;CL:0000451,1.28e-19,10;CL:0000453,1.89e-17,5;CL:0000134,5.62e-17,354;CL:0002320,2.00e-16,361;CL:0000624,3.97e-15,6;CL:0000945,4.14e-15,24;CL:0000826,4.14e-15,24;CL:0000219,1.74e-14,386;CL:0000990,1.27e-13,8;CL:0000766,9.97e-13,72;CL:0000763,1.56e-12,108;CL:0000049,1.56e-12,108;CL:0000623,1.85e-12,3;CL:0000825,1.85e-12,3;CL:0000034,3.40e-12,441;CL:0000048,4.13e-12,427;CL:0000791,5.33e-12,18;CL:0000789,5.33e-12,18;CL:0002420,5.33e-12,18;CL:0002419,5.33e-12,18;CL:0000790,5.33e-12,18;CL:0000784,8.66e-12,3;CL:0000723,8.79e-12,433;CL:0000860,2.11e-11,42;CL:0002057,2.11e-11,42;CL:0000557,5.62e-11,67;CL:0002009,6.18e-11,61;CL:0000226,1.43e-10,3;CL:0000842,1.43e-10,3;CL:0000084,2.47e-10,25;CL:0000827,2.47e-10,25;CL:0000473,1.28e-09,48;CL:0000234,1.28e-09,48;CL:0000236,1.57e-08,14;CL:0001014,1.93e-08,2;CL:0001016,1.93e-08,2;CL:0002194,1.96e-08,59;CL:0000576,1.96e-08,59;CL:0000040,1.96e-08,59;CL:0000559,1.96e-08,59;CL:0000839,2.22e-08,66;CL:0000771,2.68e-08,2;CL:0000081,1.05e-07,11;CL:0000094,3.44e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;3.42e-18;53!CL:0000790;5.70e-12;18!CL:0002057;9.34e-08;42 | |ontology_enrichment_development_v019=CL:0000051;3.42e-18;53!CL:0000790;5.70e-12;18!CL:0002057;9.34e-08;42 | ||
|ontology_enrichment_disease=DOID:0060058!3.66e-11!10 | |ontology_enrichment_disease=DOID:0060058!3.66e-11!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.36e-19!102;UBERON:0003061!1.36e-19!102;UBERON:0002193!1.37e-17!112;UBERON:0002371!9.55e-16!80;UBERON:0001474!6.53e-14!86;UBERON:0002384!2.99e-13!375;UBERON:0002405!4.09e-12!115;UBERON:0004765!4.45e-11!101;UBERON:0001434!4.45e-11!101 | |ontology_enrichment_uberon=UBERON:0002390!1.36e-19!102;UBERON:0003061!1.36e-19!102;UBERON:0002193!1.37e-17!112;UBERON:0002371!9.55e-16!80;UBERON:0001474!6.53e-14!86;UBERON:0002384!2.99e-13!375;UBERON:0002405!4.09e-12!115;UBERON:0004765!4.45e-11!101;UBERON:0001434!4.45e-11!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.13e-15,371;UBERON:0002390,7.29e-13,98;UBERON:0003061,7.29e-13,98;UBERON:0002193,3.53e-11,108;UBERON:0002371,1.79e-10,76;UBERON:0001474,2.05e-09,82;UBERON:0002405,6.68e-09,93;UBERON:0004765,3.15e-08,90;UBERON:0001434,5.07e-07,100 | |||
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|short_description=p5@DENND4A | |short_description=p5@DENND4A | ||
}} | }} |
Latest revision as of 15:47, 18 September 2015
Short description: | p5@DENND4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DENND4A_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -372bp_to_ENST00000431932, ENST00000443035, NM_001144823, NM_005848, uc002aph.2, uc002api.2, uc002apj.3, uc010ujj.1_5end |
EntrezGene: | DENND4A |
HGNC: | 24321 |
UniProt: | Q7Z401E7EPL3Q05C90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.13e-15 | 371 |
hematopoietic system | 7.29e-13 | 98 |
blood island | 7.29e-13 | 98 |
hemolymphoid system | 3.53e-11 | 108 |
bone marrow | 1.79e-10 | 76 |
bone element | 2.05e-09 | 82 |
immune system | 6.68e-09 | 93 |
skeletal element | 3.15e-08 | 90 |
skeletal system | 5.07e-07 | 100 |