FFCP PHASE1:Hg19::chr21:44493453..44493474,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=875 | |EntrezGene=875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1550 | |HGNC=1550 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=143bp_to_ENST00000488526_5end | |association_with_transcript=143bp_to_ENST00000488526_5end | ||
|cluster_id=chr21:44493453..44493474,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_11_at_CBS_5end | |description=CAGE_peak_11_at_CBS_5end | ||
|id=chr21:44493453..44493474,- | |id=chr21:44493453..44493474,- | ||
|ontology_enrichment_celltype=CL:0002322!2.03e-10!5 | |ontology_enrichment_celltype=CL:0002322!2.03e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.40e-08;3!CL:0000182;2.51e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.51e-08,3;CL:0000069,1.51e-08,3;CL:0000307,1.51e-08,3;CL:0000377,1.51e-08,3;CL:0000182,2.55e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.70e-09;11!CL:0000377;1.40e-08;3!UBERON:0009497;8.45e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.05e-19;19!UBERON:0006925;5.05e-19;19!UBERON:0002423;1.43e-14;25!UBERON:0002365;1.00e-11;31!UBERON:0002330;1.00e-11;31!UBERON:0002368;6.89e-10;33!UBERON:0000949;3.10e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.05e-19,19;UBERON:0006925,5.05e-19,19;UBERON:0008836,5.05e-19,19;UBERON:0008835,1.70e-16,22;UBERON:0003894,1.70e-16,22;UBERON:0009854,8.45e-16,23;UBERON:0007499,1.43e-14,25;UBERON:0009497,1.43e-14,25;UBERON:0000015,1.43e-14,25;UBERON:0002423,1.43e-14,25;UBERON:0006235,1.43e-14,25;UBERON:0004161,1.43e-14,25;UBERON:0009856,4.98e-14,26;UBERON:0002365,7.79e-12,31;UBERON:0002330,7.79e-12,31;UBERON:0002368,1.58e-10,35;UBERON:0000949,2.88e-08,45;UBERON:0003929,6.11e-07,54;UBERON:0005172,6.11e-07,54;UBERON:0005173,6.11e-07,54 | |||
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| ||
|short_description=p11@CBS | |short_description=p11@CBS | ||
}} | }} |
Latest revision as of 15:44, 18 September 2015
Short description: | p11@CBS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CBS_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 143bp_to_ENST00000488526_5end |
EntrezGene: | CBS |
HGNC: | 1550 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.51e-08 | 3 |
branched duct epithelial cell | 1.51e-08 | 3 |
tracheal epithelial cell | 1.51e-08 | 3 |
tracheoblast | 1.51e-08 | 3 |
hepatocyte | 2.55e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.05e-19 | 19 |
digestive gland | 5.05e-19 | 19 |
liver bud | 5.05e-19 | 19 |
hepatic diverticulum | 1.70e-16 | 22 |
liver primordium | 1.70e-16 | 22 |
digestive tract diverticulum | 8.45e-16 | 23 |
epithelial sac | 1.43e-14 | 25 |
epithelium of foregut-midgut junction | 1.43e-14 | 25 |
anatomical boundary | 1.43e-14 | 25 |
hepatobiliary system | 1.43e-14 | 25 |
foregut-midgut junction | 1.43e-14 | 25 |
septum transversum | 1.43e-14 | 25 |
sac | 4.98e-14 | 26 |
exocrine gland | 7.79e-12 | 31 |
exocrine system | 7.79e-12 | 31 |
endocrine gland | 1.58e-10 | 35 |
endocrine system | 2.88e-08 | 45 |
gut epithelium | 6.11e-07 | 54 |
abdomen element | 6.11e-07 | 54 |
abdominal segment element | 6.11e-07 | 54 |