FFCP PHASE1:Hg19::chr15:66084428..66084478,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10260 | |EntrezGene=10260 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24321 | |HGNC=24321 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z401,E7EPL3,Q05C90 | |UniProt=Q7Z401,E7EPL3,Q05C90 | ||
|association_with_transcript=152bp_to_ENST00000431932,ENST00000443035,NM_001144823,NM_005848,uc002aph.2,uc002api.2,uc002apj.3,uc010ujj.1_5end | |association_with_transcript=152bp_to_ENST00000431932,ENST00000443035,NM_001144823,NM_005848,uc002aph.2,uc002api.2,uc002apj.3,uc010ujj.1_5end | ||
|cluster_id=chr15:66084428..66084478,- | |||
|coexpression_cluster_id=C290 | |||
|description=CAGE_peak_1_at_DENND4A_5end | |description=CAGE_peak_1_at_DENND4A_5end | ||
|id=chr15:66084428..66084478,- | |id=chr15:66084428..66084478,- | ||
|ontology_enrichment_celltype=CL:0000037!1.02e-52!172;CL:0000566!1.02e-52!172;CL:0000738!7.02e-51!140;CL:0002032!2.10e-49!165;CL:0000837!2.10e-49!165;CL:0000988!1.15e-48!182;CL:0002031!1.40e-42!124;CL:0002087!4.51e-39!119;CL:0000763!1.51e-27!112;CL:0000049!1.51e-27!112;CL:0000766!7.19e-24!76;CL:0000557!1.62e-21!71;CL:0002057!6.81e-21!42;CL:0000839!6.87e-21!70;CL:0000860!2.70e-20!45;CL:0000542!8.53e-20!53;CL:0000051!8.53e-20!53;CL:0000838!1.69e-19!52;CL:0002009!2.31e-18!65;CL:0002194!3.46e-17!63;CL:0000576!3.46e-17!63;CL:0000040!3.46e-17!63;CL:0000559!3.46e-17!63;CL:0000945!2.62e-10!24;CL:0000826!2.62e-10!24;CL:0002320!6.88e-10!365;CL:0000134!7.69e-10!358;CL:0000791!2.40e-09!18;CL:0000789!2.40e-09!18;CL:0002420!2.40e-09!18;CL:0002419!2.40e-09!18;CL:0000790!2.40e-09!18;CL:0000084!8.70e-09!25;CL:0000827!8.70e-09!25;CL:0000236!2.23e-07!14 | |ontology_enrichment_celltype=CL:0000037!1.02e-52!172;CL:0000566!1.02e-52!172;CL:0000738!7.02e-51!140;CL:0002032!2.10e-49!165;CL:0000837!2.10e-49!165;CL:0000988!1.15e-48!182;CL:0002031!1.40e-42!124;CL:0002087!4.51e-39!119;CL:0000763!1.51e-27!112;CL:0000049!1.51e-27!112;CL:0000766!7.19e-24!76;CL:0000557!1.62e-21!71;CL:0002057!6.81e-21!42;CL:0000839!6.87e-21!70;CL:0000860!2.70e-20!45;CL:0000542!8.53e-20!53;CL:0000051!8.53e-20!53;CL:0000838!1.69e-19!52;CL:0002009!2.31e-18!65;CL:0002194!3.46e-17!63;CL:0000576!3.46e-17!63;CL:0000040!3.46e-17!63;CL:0000559!3.46e-17!63;CL:0000945!2.62e-10!24;CL:0000826!2.62e-10!24;CL:0002320!6.88e-10!365;CL:0000134!7.69e-10!358;CL:0000791!2.40e-09!18;CL:0000789!2.40e-09!18;CL:0002420!2.40e-09!18;CL:0002419!2.40e-09!18;CL:0000790!2.40e-09!18;CL:0000084!8.70e-09!25;CL:0000827!8.70e-09!25;CL:0000236!2.23e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.66e-17;33!CL:0002057;2.66e-17;33!CL:0000576;3.78e-14;48!CL:0000473;8.70e-14;39!CL:0000234;8.70e-14;39!CL:0002087;1.93e-13;104!CL:0000542;3.74e-12;53!CL:0000766;5.00e-12;69!CL:0000738;6.43e-11;136!CL:0000945;2.20e-10;24!CL:0000988;1.87e-09;177!CL:0000791;2.17e-09;18!CL:0000789;2.17e-09;18!CL:0002419;2.17e-09;18!CL:0000084;7.97e-09;25!CL:0000763;1.39e-08;100!CL:0000236;4.35e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.64e-54,168;CL:0000738,3.88e-52,136;CL:0002032,1.82e-50,161;CL:0000837,1.82e-50,161;CL:0000988,2.66e-50,177;CL:0002031,8.58e-44,120;CL:0002087,3.07e-40,115;CL:0000763,1.76e-28,108;CL:0000049,1.76e-28,108;CL:0000766,4.92e-25,72;CL:0000557,1.22e-22,67;CL:0000839,5.36e-22,66;CL:0000860,6.61e-21,42;CL:0002057,6.61e-21,42;CL:0000542,8.30e-20,53;CL:0000051,8.30e-20,53;CL:0000473,1.02e-19,48;CL:0000234,1.02e-19,48;CL:0000838,1.64e-19,52;CL:0002009,2.07e-19,61;CL:0002194,3.38e-18,59;CL:0000576,3.38e-18,59;CL:0000040,3.38e-18,59;CL:0000559,3.38e-18,59;CL:0000945,2.59e-10,24;CL:0000826,2.59e-10,24;CL:0002320,5.05e-10,361;CL:0000134,5.61e-10,354;CL:0000791,2.37e-09,18;CL:0000789,2.37e-09,18;CL:0002420,2.37e-09,18;CL:0002419,2.37e-09,18;CL:0000790,2.37e-09,18;CL:0000084,8.61e-09,25;CL:0000827,8.61e-09,25;CL:0000236,2.21e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;2.51e-15;42!CL:0000051;3.74e-12;53!CL:0000790;2.17e-09;18!CL:0000049;1.01e-07;108 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.00e-27!102;UBERON:0003061!3.00e-27!102;UBERON:0002193!7.21e-26!112;UBERON:0007023!7.85e-19!115;UBERON:0002371!1.42e-18!80;UBERON:0002405!1.96e-17!115;UBERON:0001474!8.27e-17!86;UBERON:0004765!1.70e-13!101;UBERON:0001434!1.70e-13!101;UBERON:0002384!2.67e-09!375;UBERON:0001049!8.07e-08!57;UBERON:0005068!8.07e-08!57;UBERON:0006241!8.07e-08!57;UBERON:0007135!8.07e-08!57;UBERON:0000178!8.69e-08!15;UBERON:0000179!8.69e-08!15;UBERON:0000463!8.69e-08!15;UBERON:0002616!5.55e-07!59;UBERON:0003080!8.15e-07!42;UBERON:0002780!8.39e-07!41;UBERON:0001890!8.39e-07!41;UBERON:0006240!8.39e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.19e-08;15!UBERON:0000179;8.19e-08;15!UBERON:0000463;8.19e-08;15 | |||
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| ||
|short_description=p1@DENND4A | |short_description=p1@DENND4A | ||
}} | }} |
Latest revision as of 15:40, 18 September 2015
Short description: | p1@DENND4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DENND4A_5end |
Coexpression cluster: | C290_Eosinophils_CD14_Basophils_Mast_CD4_CD8_immature |
Association with transcript: | 152bp_to_ENST00000431932, ENST00000443035, NM_001144823, NM_005848, uc002aph.2, uc002api.2, uc002apj.3, uc010ujj.1_5end |
EntrezGene: | DENND4A |
HGNC: | 24321 |
UniProt: | Q7Z401E7EPL3Q05C90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.53e-28 | 98 |
blood island | 3.53e-28 | 98 |
hemolymphoid system | 1.22e-26 | 108 |
immune system | 3.22e-20 | 93 |
bone marrow | 2.18e-19 | 76 |
adult organism | 1.36e-18 | 114 |
bone element | 1.76e-17 | 82 |
skeletal element | 3.24e-16 | 90 |
skeletal system | 5.17e-14 | 100 |
connective tissue | 2.00e-09 | 371 |
blood | 8.61e-08 | 15 |
haemolymphatic fluid | 8.61e-08 | 15 |
organism substance | 8.61e-08 | 15 |
neural tube | 8.67e-08 | 56 |
neural rod | 8.67e-08 | 56 |
future spinal cord | 8.67e-08 | 56 |
neural keel | 8.67e-08 | 56 |
regional part of nervous system | 4.94e-07 | 53 |
regional part of brain | 4.94e-07 | 53 |
regional part of forebrain | 8.32e-07 | 41 |
forebrain | 8.32e-07 | 41 |
anterior neural tube | 8.32e-07 | 41 |
future forebrain | 8.32e-07 | 41 |