FFCP PHASE1:Hg19::chr6:37665445..37665457,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=266727 | |EntrezGene=266727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19267 | |HGNC=19267 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFP4 | |UniProt=Q8NFP4 | ||
|association_with_transcript=308bp_to_ENST00000297153,ENST00000434837,NM_153487,uc003onu.1_5end | |association_with_transcript=308bp_to_ENST00000297153,ENST00000434837,NM_153487,uc003onu.1_5end | ||
|cluster_id=chr6:37665445..37665457,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_2_at_MDGA1_5end | |description=CAGE_peak_2_at_MDGA1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!3.22e-07!180 | |ontology_enrichment_celltype=CL:0000055!3.22e-07!180 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.94e-13;3 | |ontology_enrichment_development_v019=UBERON:0006215;5.94e-13;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.45e-10!57;UBERON:0005068!7.45e-10!57;UBERON:0006241!7.45e-10!57;UBERON:0007135!7.45e-10!57;UBERON:0003075!3.64e-09!86;UBERON:0007284!3.64e-09!86;UBERON:0002616!1.08e-08!59;UBERON:0000955!1.98e-08!69;UBERON:0006238!1.98e-08!69;UBERON:0002346!2.08e-08!90;UBERON:0001017!3.08e-08!82;UBERON:0003080!3.61e-08!42;UBERON:0003056!6.20e-08!61;UBERON:0005743!8.38e-08!86;UBERON:0002780!9.77e-08!41;UBERON:0001890!9.77e-08!41;UBERON:0006240!9.77e-08!41;UBERON:0000153!1.24e-07!129;UBERON:0007811!1.24e-07!129;UBERON:0000073!2.32e-07!94;UBERON:0001016!2.32e-07!94;UBERON:0000033!3.92e-07!123;UBERON:0000475!7.04e-07!365 | |ontology_enrichment_uberon=UBERON:0001049!7.45e-10!57;UBERON:0005068!7.45e-10!57;UBERON:0006241!7.45e-10!57;UBERON:0007135!7.45e-10!57;UBERON:0003075!3.64e-09!86;UBERON:0007284!3.64e-09!86;UBERON:0002616!1.08e-08!59;UBERON:0000955!1.98e-08!69;UBERON:0006238!1.98e-08!69;UBERON:0002346!2.08e-08!90;UBERON:0001017!3.08e-08!82;UBERON:0003080!3.61e-08!42;UBERON:0003056!6.20e-08!61;UBERON:0005743!8.38e-08!86;UBERON:0002780!9.77e-08!41;UBERON:0001890!9.77e-08!41;UBERON:0006240!9.77e-08!41;UBERON:0000153!1.24e-07!129;UBERON:0007811!1.24e-07!129;UBERON:0000073!2.32e-07!94;UBERON:0001016!2.32e-07!94;UBERON:0000033!3.92e-07!123;UBERON:0000475!7.04e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002784;3.73e-09;4!UBERON:0001905;6.22e-09;2!UBERON:0002757;6.22e-09;2!UBERON:0010134;6.22e-09;2!UBERON:0005408;6.22e-09;2!UBERON:0001899;6.22e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0002784;3.73e-09;4!UBERON:0001905;6.22e-09;2!UBERON:0002757;6.22e-09;2!UBERON:0010134;6.22e-09;2!UBERON:0005408;6.22e-09;2!UBERON:0001899;6.22e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,2.37e-09,4;UBERON:0001905,5.16e-09,2;UBERON:0002757,5.16e-09,2;UBERON:0010134,5.16e-09,2;UBERON:0005408,5.16e-09,2;UBERON:0001899,5.16e-09,2 | |||
|phase1_expression=0,0.428201047781966,0.986680828671798,1.0007329835313,1.34088328328186,1.74467704820074,2.53299878168311,0.631719873426831,0.783556884599516,0,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0,0.492484232307152,0,0,0.85870796139317,0.821246550437305,0.251085279189606,0.0764134057479513,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0,1.0429658368404,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.853460445133014,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.637130828648193,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0,2.89151321907653,0,0.724232594804119,0,0.973269740605272,0.850813354476611,0.886917589850256,0.966182642624386,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0.496971951695318,0.25326102332916,0.264818361626438,0.860509862246441,0,1.12135520028461,0,0.74000264525148,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0.204154171254893,0.122834317311768,0,2.37600571456411,1.48360157567134,0,2.15585442544872,0,0.250237039743928,0,0,0,1.05166641234618,0.113432183160021,0.538168907066586,0,0.211931901159562,0.900273288253207,0,0.515281080091258,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0.646584227275248,0.355009592516614,0.201504196455281,0,0.57978255948989,0,0,0,0,0,0.207322110030741,0.252320850875628,0,1.56449532329816,1.28648187638577,0,0,0.721879481669586,0.118306800039844,0,0.482022059766964,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,2.31860809950154,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,2.15892840593375,4.20187268114105,0,6.84289784090821,0,0,0,0,0,0.1466765716419,0.387815147273333,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,2.29723871668228,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,3.36255431980582,0,0,0.898401253958239,0.508189248444927,0,1.54657762555539,0,1.27587750330633,0,0,0,0,0,0,0.415941723061614,0,0.315404830067869,0.35142424497814,0,0,0,0.664225598535437,0.368738337083406,0.260650843404249,0.195801157462741,0.343143423810856,0,0,0,0.909382714338778,0,0,0,0.767309866440312,0.280660094433074,0.640695746278505,2.04682899626681,0.965123526861645,0,0.462629081407967,2.48586415438378,0.246381468041427,1.03850885836724,0.697262270759755,0,0,0.276242966807689,0.229628896329213,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,0,0.192190067365106,0.382838137483752,0.10115778085555,0.464845549297286,0.62962469366128,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0.37064843820784,0.572499546967965,0.372158369359667,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0.353437207037059,0,0,0,0,0.974853958525138,0,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0.655894752046633,0,0,0,0.143411352204052,0,0.35667105148125,0.709522128141196,0.844430541190656,0.987884678879706,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0.422008249231538,0.222617410045812,0.16480387422676,1.90012867315194,1.19548792950642,0,0,0.715880777515084,0.615424027305347,0.311039587661807,0,0,0,0,0,1.11136990144637,0.969332746095218,0.0927680981618513,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0.291604613383254,0.347249989866585,0.885741385813839,1.08536794762867,12.2065389053667,34.7218876184045,15.664023804538,0,0.21787692703798,0.697118721393016,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0.421996129056054,0,0,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0,0,0.269604531922708,0,0.702793337176017,0,0,0.485560759068186,0,0,0.30607276163049,0.126373159256976,0.450970258243478,0,0,0,0,0,0,0,0,0.489961987071888,1.13176968554523,0,0,0,0,0,0.387956065953678,0.176512253383001,0,0.411125773940253,0,0.379864775735272,0,0,0.213452994739353,0.19980960958213,0.432271251462318,0,0,0.14405479798815,0,0,0,0.313808538937,0.203996435272644,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0.458320848023367,0,0,0,0,0,0.360299883542404,0,0,0,0,0.393709926058995,0.169346664131569,0,0.681017030557878,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0.662091970365432,0,1.08599920350743,0,0.653174720218818,1.19730191562487,1.23138781124008,0.681552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| ||
|short_description=p2@MDGA1 | |short_description=p2@MDGA1 | ||
}} | }} |
Latest revision as of 15:32, 18 September 2015
Short description: | p2@MDGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MDGA1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 308bp_to_ENST00000297153, ENST00000434837, NM_153487, uc003onu.1_5end |
EntrezGene: | MDGA1 |
HGNC: | 19267 |
UniProt: | Q8NFP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 2.37e-09 | 4 |
pineal body | 5.16e-09 | 2 |
regional part of epithalamus | 5.16e-09 | 2 |
secretory circumventricular organ | 5.16e-09 | 2 |
circumventricular organ | 5.16e-09 | 2 |
epithalamus | 5.16e-09 | 2 |