FFCP PHASE1:Hg19::chr3:49055515..49055579,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:49055515..49055579,- to FFCP PHASE1:Hg19::chr3:49055515..49055579,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55152 | |EntrezGene=55152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25536 | |HGNC=25536 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-61bp_to_ENST00000467457_5end | |||
|cluster_id=chr3:49055515..49055579,- | |||
|description=CAGE_peak_3_at_DALRD3_5end | |||
|id=chr3:49055515..49055579,- | |||
|ontology_enrichment_celltype=CL:0000055!1.74e-22!180;CL:0000220!3.05e-18!246;CL:0002321!1.37e-17!248;CL:0000183!1.87e-17!59;CL:0000192!1.33e-16!42;CL:0000514!1.33e-16!42;CL:0000222!2.23e-16!119;CL:0000548!4.50e-16!679;CL:0000004!4.50e-16!679;CL:0000255!4.50e-16!679;CL:0000680!4.60e-16!57;CL:0000056!4.60e-16!57;CL:0000355!4.60e-16!57;CL:0000187!1.80e-15!54;CL:0000012!4.46e-15!682;CL:0000393!1.36e-14!60;CL:0000211!1.36e-14!60;CL:0000359!1.47e-13!32;CL:0000144!6.03e-12!625;CL:0002371!1.97e-11!591;CL:0000066!2.40e-10!254;CL:0000057!2.26e-09!75;CL:0000003!1.39e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.01e-12;32!CL:0000192;2.26e-11;43!CL:0000187;5.01e-08;55!CL:0000393;1.97e-07;61!CL:0000211;1.97e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.72e-17,121;CL:0000192,6.86e-17,43;CL:0000514,6.86e-17,43;CL:0002321,9.85e-17,250;CL:0000680,2.07e-16,58;CL:0000056,2.07e-16,58;CL:0000355,2.07e-16,58;CL:0000187,1.16e-15,55;CL:0000393,9.07e-15,61;CL:0000211,9.07e-15,61;CL:0000359,6.84e-14,32;CL:0000066,1.08e-07,253;CL:0000057,3.64e-07,76;CL:1000449,9.46e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;2.26e-11;43!CL:0000355;9.49e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.72e-17!83;UBERON:0002329!4.72e-17!83;UBERON:0003077!4.72e-17!83;UBERON:0003059!4.72e-17!83;UBERON:0007282!4.72e-17!83;UBERON:0009618!4.72e-17!83;UBERON:0007285!4.72e-17!83;UBERON:0000486!3.79e-16!82;UBERON:0004290!1.74e-15!70;UBERON:0005256!4.41e-15!143;UBERON:0002100!2.23e-14!216;UBERON:0001134!4.56e-14!61;UBERON:0002036!4.56e-14!61;UBERON:0003082!4.56e-14!61;UBERON:0002385!4.85e-13!63;UBERON:0001015!4.85e-13!63;UBERON:0000383!4.85e-13!63;UBERON:0003104!6.04e-13!238;UBERON:0009142!6.04e-13!238;UBERON:0001637!4.27e-12!42;UBERON:0003509!4.27e-12!42;UBERON:0004572!4.27e-12!42;UBERON:0000475!1.12e-11!365;UBERON:0000481!3.65e-10!347;UBERON:0004573!4.20e-09!33;UBERON:0004571!4.20e-09!33;UBERON:0000490!9.01e-09!138;UBERON:0002049!9.26e-09!79;UBERON:0007798!9.26e-09!79;UBERON:0000483!8.32e-08!309;UBERON:0000119!9.87e-08!312;UBERON:0003914!1.24e-07!118;UBERON:0001981!4.06e-07!60;UBERON:0007500!4.06e-07!60;UBERON:0004537!4.06e-07!60;UBERON:0006965!4.06e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.04e-09;42!UBERON:0003509;8.04e-09;42!UBERON:0004572;8.04e-09;42!UBERON:0004573;1.73e-08;33!UBERON:0004571;1.73e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.65e-18,78;UBERON:0000486,3.64e-17,83;UBERON:0002329,4.75e-16,71;UBERON:0003059,4.75e-16,71;UBERON:0007282,4.75e-16,71;UBERON:0004290,4.75e-16,71;UBERON:0009618,4.75e-16,71;UBERON:0003077,1.58e-15,72;UBERON:0007285,1.58e-15,72;UBERON:0007524,5.06e-15,73;UBERON:0001134,1.08e-14,62;UBERON:0002036,1.08e-14,62;UBERON:0003082,1.08e-14,62;UBERON:0002385,1.21e-13,64;UBERON:0001015,1.21e-13,64;UBERON:0000383,1.21e-13,64;UBERON:0001637,6.73e-13,42;UBERON:0003509,6.73e-13,42;UBERON:0004572,6.73e-13,42;UBERON:0002100,1.76e-12,199;UBERON:0003104,2.16e-12,160;UBERON:0009142,2.16e-12,160;UBERON:0005256,6.02e-12,122;UBERON:0000490,1.85e-10,148;UBERON:0002049,1.67e-09,78;UBERON:0007798,1.67e-09,78;UBERON:0004573,2.77e-09,33;UBERON:0004571,2.77e-09,33;UBERON:0003914,9.32e-09,117;UBERON:0000483,1.80e-08,306;UBERON:0000119,4.93e-08,309;UBERON:0007500,5.31e-08,59;UBERON:0001981,5.31e-08,59;UBERON:0004537,5.31e-08,59;UBERON:0006965,5.31e-08,59;UBERON:0000055,1.91e-07,68;UBERON:0004872,6.63e-07,83;UBERON:0006555,7.76e-07,16;UBERON:0004819,7.76e-07,16;UBERON:0004211,9.46e-07,15;UBERON:0009773,9.46e-07,15;UBERON:0001231,9.46e-07,15;UBERON:0001285,9.46e-07,15;UBERON:0007684,9.46e-07,15;UBERON:0004208,9.46e-07,15 | |||
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|short_description=p3@DALRD3 | |||
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Latest revision as of 15:28, 18 September 2015
Short description: | p3@DALRD3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DALRD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_ENST00000467457_5end |
EntrezGene: | DALRD3 |
HGNC: | 25536 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.72e-17 | 121 |
smooth muscle cell | 6.86e-17 | 43 |
smooth muscle myoblast | 6.86e-17 | 43 |
embryonic cell | 9.85e-17 | 250 |
muscle precursor cell | 2.07e-16 | 58 |
myoblast | 2.07e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.07e-16 | 58 |
muscle cell | 1.16e-15 | 55 |
electrically responsive cell | 9.07e-15 | 61 |
electrically active cell | 9.07e-15 | 61 |
vascular associated smooth muscle cell | 6.84e-14 | 32 |
epithelial cell | 1.08e-07 | 253 |
fibroblast | 3.64e-07 | 76 |
epithelial cell of nephron | 9.46e-07 | 15 |