FFCP PHASE1:Hg19::chr4:74988986..74988992,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441024 | |EntrezGene=441024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31865 | |HGNC=31865 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000490698_5end | |association_with_transcript=0bp_to_ENST00000490698_5end | ||
|cluster_id=chr4:74988986..74988992,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_7_at_MTHFD2L_5end | |description=CAGE_peak_7_at_MTHFD2L_5end | ||
|id=chr4:74988986..74988992,+ | |id=chr4:74988986..74988992,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.33e-08!12;CL:0000417!2.33e-08!12;CL:0000668!2.33e-08!12;CL:0000414!2.33e-08!12;CL:0000412!2.33e-08!12;CL:0000182!2.33e-08!12 | |ontology_enrichment_celltype=CL:0000181!2.33e-08!12;CL:0000417!2.33e-08!12;CL:0000668!2.33e-08!12;CL:0000414!2.33e-08!12;CL:0000412!2.33e-08!12;CL:0000182!2.33e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.38e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.54e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.22e-17;1!UBERON:0010122;1.33e-09;2!UBERON:0004161;5.81e-07;11!UBERON:0003056;9.64e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;1.22e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.70e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.22e-23!57;UBERON:0005068!3.22e-23!57;UBERON:0006241!3.22e-23!57;UBERON:0007135!3.22e-23!57;UBERON:0007023!1.25e-21!115;UBERON:0002020!9.76e-19!34;UBERON:0003528!9.76e-19!34;UBERON:0001893!1.95e-18!34;UBERON:0002616!3.02e-18!59;UBERON:0002791!6.77e-17!33;UBERON:0001017!9.59e-17!82;UBERON:0002780!1.14e-16!41;UBERON:0001890!1.14e-16!41;UBERON:0006240!1.14e-16!41;UBERON:0000073!3.29e-16!94;UBERON:0001016!3.29e-16!94;UBERON:0003080!3.58e-16!42;UBERON:0000955!6.21e-16!69;UBERON:0006238!6.21e-16!69;UBERON:0005743!1.16e-15!86;UBERON:0001869!3.21e-15!32;UBERON:0002308!1.28e-14!9;UBERON:0000125!1.28e-14!9;UBERON:0003075!1.34e-14!86;UBERON:0007284!1.34e-14!86;UBERON:0000025!1.94e-14!194;UBERON:0002346!1.16e-13!90;UBERON:0002298!3.48e-12!8;UBERON:0000369!8.38e-12!4;UBERON:0002435!8.38e-12!4;UBERON:0000204!8.38e-12!4;UBERON:0010082!8.38e-12!4;UBERON:0002420!4.10e-11!9;UBERON:0007245!4.10e-11!9;UBERON:0010009!4.10e-11!9;UBERON:0010011!4.10e-11!9;UBERON:0000454!4.10e-11!9;UBERON:0004111!2.09e-10!241;UBERON:0009663!4.12e-10!7;UBERON:0002619!4.78e-10!22;UBERON:0003056!7.57e-10!61;UBERON:0000349!8.87e-10!5;UBERON:0005383!1.69e-09!3;UBERON:0005382!1.69e-09!3;UBERON:0001896!3.63e-09!3;UBERON:0005290!3.63e-09!3;UBERON:0010096!3.63e-09!3;UBERON:0006331!5.07e-09!3;UBERON:0000956!1.18e-08!25;UBERON:0000203!1.18e-08!25;UBERON:0002771!1.35e-08!3;UBERON:0000477!1.89e-08!286;UBERON:0003076!2.40e-08!15;UBERON:0003057!2.40e-08!15;UBERON:0000033!3.60e-08!123;UBERON:0005177!5.23e-08!107;UBERON:0000062!1.06e-07!511;UBERON:0000153!1.60e-07!129;UBERON:0007811!1.60e-07!129;UBERON:0000119!2.00e-07!312;UBERON:0004732!2.43e-07!13;UBERON:0001954!3.68e-07!2;UBERON:0003022!3.68e-07!2;UBERON:0002421!3.68e-07!2;UBERON:0002600!3.68e-07!2;UBERON:0000200!3.84e-07!6;UBERON:0001873!3.90e-07!2;UBERON:0010122!3.90e-07!2;UBERON:0000483!5.31e-07!309;UBERON:0001950!6.23e-07!20;UBERON:0000475!8.21e-07!365;UBERON:0004121!8.98e-07!169;UBERON:0002107!9.02e-07!19;UBERON:0006925!9.02e-07!19;UBERON:0008836!9.02e-07!19 | |ontology_enrichment_uberon=UBERON:0001049!3.22e-23!57;UBERON:0005068!3.22e-23!57;UBERON:0006241!3.22e-23!57;UBERON:0007135!3.22e-23!57;UBERON:0007023!1.25e-21!115;UBERON:0002020!9.76e-19!34;UBERON:0003528!9.76e-19!34;UBERON:0001893!1.95e-18!34;UBERON:0002616!3.02e-18!59;UBERON:0002791!6.77e-17!33;UBERON:0001017!9.59e-17!82;UBERON:0002780!1.14e-16!41;UBERON:0001890!1.14e-16!41;UBERON:0006240!1.14e-16!41;UBERON:0000073!3.29e-16!94;UBERON:0001016!3.29e-16!94;UBERON:0003080!3.58e-16!42;UBERON:0000955!6.21e-16!69;UBERON:0006238!6.21e-16!69;UBERON:0005743!1.16e-15!86;UBERON:0001869!3.21e-15!32;UBERON:0002308!1.28e-14!9;UBERON:0000125!1.28e-14!9;UBERON:0003075!1.34e-14!86;UBERON:0007284!1.34e-14!86;UBERON:0000025!1.94e-14!194;UBERON:0002346!1.16e-13!90;UBERON:0002298!3.48e-12!8;UBERON:0000369!8.38e-12!4;UBERON:0002435!8.38e-12!4;UBERON:0000204!8.38e-12!4;UBERON:0010082!8.38e-12!4;UBERON:0002420!4.10e-11!9;UBERON:0007245!4.10e-11!9;UBERON:0010009!4.10e-11!9;UBERON:0010011!4.10e-11!9;UBERON:0000454!4.10e-11!9;UBERON:0004111!2.09e-10!241;UBERON:0009663!4.12e-10!7;UBERON:0002619!4.78e-10!22;UBERON:0003056!7.57e-10!61;UBERON:0000349!8.87e-10!5;UBERON:0005383!1.69e-09!3;UBERON:0005382!1.69e-09!3;UBERON:0001896!3.63e-09!3;UBERON:0005290!3.63e-09!3;UBERON:0010096!3.63e-09!3;UBERON:0006331!5.07e-09!3;UBERON:0000956!1.18e-08!25;UBERON:0000203!1.18e-08!25;UBERON:0002771!1.35e-08!3;UBERON:0000477!1.89e-08!286;UBERON:0003076!2.40e-08!15;UBERON:0003057!2.40e-08!15;UBERON:0000033!3.60e-08!123;UBERON:0005177!5.23e-08!107;UBERON:0000062!1.06e-07!511;UBERON:0000153!1.60e-07!129;UBERON:0007811!1.60e-07!129;UBERON:0000119!2.00e-07!312;UBERON:0004732!2.43e-07!13;UBERON:0001954!3.68e-07!2;UBERON:0003022!3.68e-07!2;UBERON:0002421!3.68e-07!2;UBERON:0002600!3.68e-07!2;UBERON:0000200!3.84e-07!6;UBERON:0001873!3.90e-07!2;UBERON:0010122!3.90e-07!2;UBERON:0000483!5.31e-07!309;UBERON:0001950!6.23e-07!20;UBERON:0000475!8.21e-07!365;UBERON:0004121!8.98e-07!169;UBERON:0002107!9.02e-07!19;UBERON:0006925!9.02e-07!19;UBERON:0008836!9.02e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.78e-22;19!UBERON:0006925;4.78e-22;19!UBERON:0000941;1.22e-17;1!UBERON:0001785;1.22e-17;1!UBERON:0002464;1.22e-17;1!UBERON:0004904;1.22e-17;1!UBERON:0001021;1.22e-17;1!UBERON:0002423;8.64e-17;25!UBERON:0002365;5.23e-14;31!UBERON:0002330;5.23e-14;31!UBERON:0002368;9.80e-12;33!UBERON:0001873;1.33e-09;2!UBERON:0003714;1.71e-09;2!UBERON:0005162;1.71e-09;2!UBERON:0000122;1.71e-09;2!UBERON:0000949;1.32e-08;43!UBERON:0005383;8.15e-07;3!UBERON:0005382;8.15e-07;3!UBERON:0001896;9.64e-07;3!UBERON:0005290;9.64e-07;3!UBERON:0005172;9.97e-07;52!UBERON:0005173;9.97e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.22e-22,19;UBERON:0006925,5.22e-22,19;UBERON:0008836,5.22e-22,19;UBERON:0008835,4.98e-19,22;UBERON:0003894,4.98e-19,22;UBERON:0009854,3.30e-18,23;UBERON:0000941,8.72e-18,1;UBERON:0001785,8.72e-18,1;UBERON:0002464,8.72e-18,1;UBERON:0004904,8.72e-18,1;UBERON:0001021,8.72e-18,1;UBERON:0003902,8.72e-18,1;UBERON:0005425,8.72e-18,1;UBERON:0007499,9.23e-17,25;UBERON:0009497,9.23e-17,25;UBERON:0000015,9.23e-17,25;UBERON:0002423,9.23e-17,25;UBERON:0006235,9.23e-17,25;UBERON:0004161,9.23e-17,25;UBERON:0009856,4.03e-16,26;UBERON:0002365,1.55e-13,31;UBERON:0002330,1.55e-13,31;UBERON:0002368,5.38e-12,35;UBERON:0001873,1.33e-09,2;UBERON:0010122,1.33e-09,2;UBERON:0003714,1.44e-09,2;UBERON:0005162,1.44e-09,2;UBERON:0000122,1.44e-09,2;UBERON:0000949,2.46e-09,45;UBERON:0003929,8.88e-08,54;UBERON:0005172,8.88e-08,54;UBERON:0005173,8.88e-08,54;UBERON:0002530,4.08e-07,59;UBERON:0005911,4.14e-07,82;UBERON:0002417,5.37e-07,60;UBERON:0000916,5.37e-07,60;UBERON:0005383,8.15e-07,3;UBERON:0005382,8.15e-07,3;UBERON:0001896,9.64e-07,3;UBERON:0005290,9.64e-07,3;UBERON:0010096,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,78.5881215895351,12.7767538168091,50.2171420679193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38854272215878,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,4.5189024372854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,2.65722415744152,0.361789315876224,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.121499113316049,0,0.315222829196793,0.104909176269996,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,19.0517903781507,0,0.258565912723101,0.13223260174269,0.684347351537318,0,0.106787412567695,1.25763444079733,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,1.14681839138014,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,1.02892805662451,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,78.5881215895351,12.7767538168091,50.2171420679193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38854272215878,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,4.5189024372854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,2.65722415744152,0.361789315876224,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.121499113316049,0,0.315222829196793,0.104909176269996,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,19.0517903781507,0,0.258565912723101,0.13223260174269,0.684347351537318,0,0.106787412567695,1.25763444079733,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,1.14681839138014,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,1.02892805662451,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p7@MTHFD2L | |short_description=p7@MTHFD2L | ||
}} | }} |
Latest revision as of 15:27, 18 September 2015
Short description: | p7@MTHFD2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MTHFD2L_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000490698_5end |
EntrezGene: | MTHFD2L |
HGNC: | 31865 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.54e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.70e-17 | 1 |