FFCP PHASE1:Hg19::chr1:171501837..171501864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23215 | |EntrezGene=23215 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24903 | |HGNC=24903 | ||
|TSSclassifier=strong | |||
|UniProt=B4DM27 | |UniProt=B4DM27 | ||
|association_with_transcript=-68bp_to_AK297263_5end | |association_with_transcript=-68bp_to_AK297263_5end | ||
|cluster_id=chr1:171501837..171501864,+ | |||
|coexpression_cluster_id=C852 | |||
|description=CAGE_peak_14_at_PRRC2C_5end | |description=CAGE_peak_14_at_PRRC2C_5end | ||
|id=chr1:171501837..171501864,+ | |id=chr1:171501837..171501864,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.55e-10!45;CL:0002057!1.57e-09!42;CL:0002032!6.43e-09!165;CL:0000837!6.43e-09!165;CL:0000037!2.33e-08!172;CL:0000566!2.33e-08!172;CL:0002087!5.76e-08!119;CL:0002031!9.53e-08!124;CL:0000738!1.17e-07!140;CL:0000763!6.28e-07!112;CL:0000049!6.28e-07!112;CL:0000988!6.89e-07!182;CL:0000766!7.06e-07!76 | |ontology_enrichment_celltype=CL:0000860!4.55e-10!45;CL:0002057!1.57e-09!42;CL:0002032!6.43e-09!165;CL:0000837!6.43e-09!165;CL:0000037!2.33e-08!172;CL:0000566!2.33e-08!172;CL:0002087!5.76e-08!119;CL:0002031!9.53e-08!124;CL:0000738!1.17e-07!140;CL:0000763!6.28e-07!112;CL:0000049!6.28e-07!112;CL:0000988!6.89e-07!182;CL:0000766!7.06e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.59e-15;33!CL:0002057;6.59e-15;33!CL:0000473;2.46e-11;39!CL:0000234;2.46e-11;39!CL:0000576;4.67e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.01e-13,42;CL:0002057,7.01e-13,42;CL:0000473,6.60e-12,48;CL:0000234,6.60e-12,48;CL:0002087,4.64e-11,115;CL:0000738,6.40e-10,136;CL:0002031,2.32e-09,120;CL:0002032,3.35e-09,161;CL:0000837,3.35e-09,161;CL:0000037,4.71e-09,168;CL:0000988,1.02e-07,177;CL:0002194,1.14e-07,59;CL:0000576,1.14e-07,59;CL:0000040,1.14e-07,59;CL:0000559,1.14e-07,59;CL:0000766,2.51e-07,72;CL:0002009,3.78e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;6.77e-10;42 | |||
|ontology_enrichment_disease=DOID:162!1.18e-07!235;DOID:14566!2.44e-07!239 | |ontology_enrichment_disease=DOID:162!1.18e-07!235;DOID:14566!2.44e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.53e-08!57;UBERON:0005068!1.53e-08!57;UBERON:0006241!1.53e-08!57;UBERON:0007135!1.53e-08!57;UBERON:0002780!3.35e-08!41;UBERON:0001890!3.35e-08!41;UBERON:0006240!3.35e-08!41;UBERON:0003080!1.35e-07!42;UBERON:0002020!4.54e-07!34;UBERON:0003528!4.54e-07!34 | |ontology_enrichment_uberon=UBERON:0001049!1.53e-08!57;UBERON:0005068!1.53e-08!57;UBERON:0006241!1.53e-08!57;UBERON:0007135!1.53e-08!57;UBERON:0002780!3.35e-08!41;UBERON:0001890!3.35e-08!41;UBERON:0006240!3.35e-08!41;UBERON:0003080!1.35e-07!42;UBERON:0002020!4.54e-07!34;UBERON:0003528!4.54e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.95e-10;22!UBERON:0002780;2.33e-09;41!UBERON:0001890;2.33e-09;41!UBERON:0001950;2.23e-08;20!UBERON:0000956;4.10e-08;25!UBERON:0000203;4.10e-08;25!UBERON:0003528;5.83e-08;34!UBERON:0002020;5.83e-08;34!UBERON:0002791;5.90e-08;32!UBERON:0001869;2.72e-07;32!UBERON:0000073;5.61e-07;53!UBERON:0002616;5.61e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.55e-14,56;UBERON:0005068,9.55e-14,56;UBERON:0006241,9.55e-14,56;UBERON:0007135,9.55e-14,56;UBERON:0002780,2.81e-12,41;UBERON:0001890,2.81e-12,41;UBERON:0003080,2.81e-12,41;UBERON:0006240,2.81e-12,41;UBERON:0000073,5.76e-12,53;UBERON:0002616,5.76e-12,53;UBERON:0001017,1.80e-10,81;UBERON:0003528,3.43e-10,34;UBERON:0002020,3.43e-10,34;UBERON:0002619,6.19e-10,22;UBERON:0000955,1.23e-09,68;UBERON:0006238,1.23e-09,68;UBERON:0003075,4.26e-09,82;UBERON:0007284,4.26e-09,82;UBERON:0002791,5.32e-09,32;UBERON:0002346,7.19e-09,86;UBERON:0001016,7.91e-09,89;UBERON:0010371,1.23e-08,104;UBERON:0001950,1.68e-08,20;UBERON:0000956,3.70e-08,25;UBERON:0000203,3.70e-08,25;UBERON:0001893,4.09e-08,34;UBERON:0001869,6.82e-08,32;UBERON:0003056,5.73e-07,61 | |||
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| ||
|short_description=p14@PRRC2C | |short_description=p14@PRRC2C | ||
}} | }} |
Latest revision as of 15:21, 18 September 2015
Short description: | p14@PRRC2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PRRC2C_5end |
Coexpression cluster: | C852_CD14_CD4_Neutrophils_CD8_Natural_acute_neuroectodermal |
Association with transcript: | -68bp_to_AK297263_5end |
EntrezGene: | PRRC2C |
HGNC: | 24903 |
UniProt: | B4DM27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.01e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.01e-13 | 42 |
defensive cell | 6.60e-12 | 48 |
phagocyte | 6.60e-12 | 48 |
nongranular leukocyte | 4.64e-11 | 115 |
leukocyte | 6.40e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 2.32e-09 | 120 |
hematopoietic oligopotent progenitor cell | 3.35e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.35e-09 | 161 |
hematopoietic stem cell | 4.71e-09 | 168 |
hematopoietic cell | 1.02e-07 | 177 |
monopoietic cell | 1.14e-07 | 59 |
monocyte | 1.14e-07 | 59 |
monoblast | 1.14e-07 | 59 |
promonocyte | 1.14e-07 | 59 |
myeloid leukocyte | 2.51e-07 | 72 |
macrophage dendritic cell progenitor | 3.78e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
neural tube | 9.55e-14 | 56 |
neural rod | 9.55e-14 | 56 |
future spinal cord | 9.55e-14 | 56 |
neural keel | 9.55e-14 | 56 |
regional part of forebrain | 2.81e-12 | 41 |
forebrain | 2.81e-12 | 41 |
anterior neural tube | 2.81e-12 | 41 |
future forebrain | 2.81e-12 | 41 |
regional part of nervous system | 5.76e-12 | 53 |
regional part of brain | 5.76e-12 | 53 |
central nervous system | 1.80e-10 | 81 |
brain grey matter | 3.43e-10 | 34 |
gray matter | 3.43e-10 | 34 |
regional part of cerebral cortex | 6.19e-10 | 22 |
brain | 1.23e-09 | 68 |
future brain | 1.23e-09 | 68 |
neural plate | 4.26e-09 | 82 |
presumptive neural plate | 4.26e-09 | 82 |
regional part of telencephalon | 5.32e-09 | 32 |
neurectoderm | 7.19e-09 | 86 |
nervous system | 7.91e-09 | 89 |
ecto-epithelium | 1.23e-08 | 104 |
neocortex | 1.68e-08 | 20 |
cerebral cortex | 3.70e-08 | 25 |
pallium | 3.70e-08 | 25 |
telencephalon | 4.09e-08 | 34 |
cerebral hemisphere | 6.82e-08 | 32 |
pre-chordal neural plate | 5.73e-07 | 61 |