FFCP PHASE1:Hg19::chr15:65822958..65822963,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51495 | |EntrezGene=51495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24175 | |HGNC=24175 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P035 | |UniProt=Q9P035 | ||
|association_with_transcript=131bp_to_NM_016395,uc002apb.1,uc002apc.2,uc010uiw.1_5end | |association_with_transcript=131bp_to_NM_016395,uc002apb.1,uc002apc.2,uc010uiw.1_5end | ||
|cluster_id=chr15:65822958..65822963,+ | |||
|description=CAGE_peak_3_at_PTPLAD1_5end | |description=CAGE_peak_3_at_PTPLAD1_5end | ||
|id=chr15:65822958..65822963,+ | |id=chr15:65822958..65822963,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.64e-08!254 | |ontology_enrichment_celltype=CL:0000066!1.64e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000511;5.16e-21;1!CL:0002625;5.16e-21;1!CL:0000216;5.16e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.45e-21,1;CL:0002625,3.45e-21,1;CL:0000216,3.45e-21,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.32e-15!235;DOID:14566!6.34e-14!239;DOID:305!5.82e-13!106;DOID:0050687!2.06e-12!143;DOID:0050686!1.68e-07!137 | |ontology_enrichment_disease=DOID:162!5.32e-15!235;DOID:14566!6.34e-14!239;DOID:305!5.82e-13!106;DOID:0050687!2.06e-12!143;DOID:0050686!1.68e-07!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.16e-21;1!UBERON:0001343;5.16e-21;1!UBERON:0004910;5.16e-21;1!UBERON:0004813;5.16e-21;1!UBERON:0004909;3.34e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.45e-21,1;UBERON:0001343,3.45e-21,1;UBERON:0004910,3.45e-21,1;UBERON:0005154,3.45e-21,1;UBERON:0005295,3.45e-21,1;UBERON:0004813,3.45e-21,1;UBERON:0005297,3.45e-21,1;UBERON:0005294,3.45e-21,1;UBERON:0010141,3.45e-21,1;UBERON:0005891,3.45e-21,1;UBERON:0004909,2.73e-11,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0.619737604642413,0.426507697462265,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0.189069634328136,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0.66944122552934,0,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0.408308342509787,0.368502951935304,0.103325781175765,1.18800285728205,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0.272746120590835,0,0.487894824518382,0,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0.482022059766964,0.220587945464788,0,0.474541238222193,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,0,2.94848165003288,0,0,0.245976877086227,0.514703430895577,0.329250856225877,0,0.301586917234893,0.370353780634118,0,0,0,0.231860809950154,0.234817388471643,0,0.462985512576611,0.190254152234598,0,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0.283550194484773,0,0,0,0,0.088048434013226,0,0,0,0.380987365753014,0,0,0,0.514137463516618,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.448340575974109,0,0.431255149719035,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0.246381468041427,0,0,0.362578348774867,0.40101294060657,0.276242966807689,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0.515205058238611,0.183138929636687,0,0.574265537996172,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0.170453254832202,0,0,0.384380134730212,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0.577076851905779,0.213425530045242,0,0.399158742865633,0.383010740264733,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0.16480387422676,0.211125408127993,0.19924798825107,0.276283915531148,0.251932747854276,0.818149460017238,0,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,1.30213880542617,0.524759999977174,0.724999575434793,0.227586896570999,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0.331737779793674,0,0,0.762569244632931,0.697118721393016,0.0769502585037971,0,0,0.448788222048861,0.217294743844016,0,0,0.533034776018635,2.04386596391473,0.31396051279005,0,0,0.19606253431774,0.167821586975843,0,0,0.210998064528027,0.326465616318295,0.565412285735763,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0.391329237864179,0,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0,0.138674673013139,0.173559738335131,0.293977192243133,0.174118413160805,0.17472666824203,0,0.677294319023596,0.511625219603299,0.164230914106418,0,0.176512253383001,0,0.137041924646751,0,0.126621591911757,0.586654148204409,0,0,0.19980960958213,0.288180834308212,0.343609788497747,0.171594997861965,0.432164393964449,0,0,0.135904206073614,0.209205692624666,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0.0671834724867263,0,0,0.315132729228895,0.247247575143499,0.26961417541674,0,0.338693328263138,0,0.272406812223151,0.160753148465019,0.550157746388935,0,0,0,0.182248669974074,0,1.10327990218877,0.891727998294968,0.211200673038813,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0.58620893471233,0,0.258565912723101,0.13223260174269,0.171086837884329,0.704815022316672,0,0,0,0.496166021811951,0.395223263795889,2.31405936923702,0.638341257770182,0,0,0,0,0.471162288750703,0,0.366078794705889,0.1251909307065,0,0.221858103073705,0.248385611765534,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0.28984205722165,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0,0.310874401165561,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0.694567422971502,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0.168942440653073,0.256241518587947,0.345430341731199,0.303859956177382,0.276516872303462,0,0,0,0,0.245772908753719,0,0.19998739585493,0.320075189082423,0.688859918643263,0,0,0,0,0.895260599125562,0.107824811396682,1.10086159299127,0,0.169732529954025,0,0,0,0.636008701306837,0.315446980005013,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.207471757392654,0,0,0.196295437002051,0.11796972334774,0.183428598521679,0.231051332300676,0,0.690359926060101,0.596748666348824,0.150420656698515,0,0,0.261906694481422,0.163771917510097,0.591424344868181,0.270150338473579,0,0,0.19024743058172,0,0,0,0,0,0,0,0.606965604236632,0,0.354809480650555,0.115233987555779,0.171488009437418,0.543757863814654,0.197318320688547,0.236387681767936,0,0.078493092850514,0.314231179832004,0,0.913158720509496,0.215927591218621,0,0,0.316027223465453,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0.490751168076215,0.121917924982269,0,0,0,0,0.233939463462106,0.397901550322736,0.237840181555137,0.33883824611688,0.219881033490858,0.301925687133347,0.154348316215889,0.218559560503957,0.470317296361523,0,0.235676547101626,0.392616934229891,0.297046400327086,0.8453114551668,0,0,0.193373663920732,0,0,0,0.401206833445841,0,0,0,0.315543124386369,0.203974470572744,0,0,0.743990036333503,0,0,0.378499274505237,0.437062287854782,0,0.305966489225945,0.26721740526556,0.36757959813938,0.250707539292375,0.151557396436479,0.535928260312357,0,0,0,0.23806443146374,0.193766729508018,0.31037357147929,0,1.20929600728513,0.404234377916439,0,0,0.202056159043763,0.286888821570705,0,0.244209805832924,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0.619737604642413,0.426507697462265,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0.189069634328136,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0.66944122552934,0,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0.408308342509787,0.368502951935304,0.103325781175765,1.18800285728205,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0.272746120590835,0,0.487894824518382,0,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0.482022059766964,0.220587945464788,0,0.474541238222193,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,0,2.94848165003288,0,0,0.245976877086227,0.514703430895577,0.329250856225877,0,0.301586917234893,0.370353780634118,0,0,0,0.231860809950154,0.234817388471643,0,0.462985512576611,0.190254152234598,0,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0.283550194484773,0,0,0,0,0.088048434013226,0,0,0,0.380987365753014,0,0,0,0.514137463516618,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.448340575974109,0,0.431255149719035,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0.246381468041427,0,0,0.362578348774867,0.40101294060657,0.276242966807689,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0.515205058238611,0.183138929636687,0,0.574265537996172,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0.170453254832202,0,0,0.384380134730212,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0.577076851905779,0.213425530045242,0,0.399158742865633,0.383010740264733,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0.16480387422676,0.211125408127993,0.19924798825107,0.276283915531148,0.251932747854276,0.818149460017238,0,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,1.30213880542617,0.524759999977174,0.724999575434793,0.227586896570999,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0.331737779793674,0,0,0.762569244632931,0.697118721393016,0.0769502585037971,0,0,0.448788222048861,0.217294743844016,0,0,0.533034776018635,2.04386596391473,0.31396051279005,0,0,0.19606253431774,0.167821586975843,0,0,0.210998064528027,0.326465616318295,0.565412285735763,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0.391329237864179,0,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0,0.138674673013139,0.173559738335131,0.293977192243133,0.174118413160805,0.17472666824203,0,0.677294319023596,0.511625219603299,0.164230914106418,0,0.176512253383001,0,0.137041924646751,0,0.126621591911757,0.586654148204409,0,0,0.19980960958213,0.288180834308212,0.343609788497747,0.171594997861965,0.432164393964449,0,0,0.135904206073614,0.209205692624666,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0.0671834724867263,0,0,0.315132729228895,0.247247575143499,0.26961417541674,0,0.338693328263138,0,0.272406812223151,0.160753148465019,0.550157746388935,0,0,0,0.182248669974074,0,1.10327990218877,0.891727998294968,0.211200673038813,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0.58620893471233,0,0.258565912723101,0.13223260174269,0.171086837884329,0.704815022316672,0,0,0,0.496166021811951,0.395223263795889,2.31405936923702,0.638341257770182,0,0,0,0,0.471162288750703,0,0.366078794705889,0.1251909307065,0,0.221858103073705,0.248385611765534,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0.28984205722165,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0,0.310874401165561,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0.694567422971502,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0.168942440653073,0.256241518587947,0.345430341731199,0.303859956177382,0.276516872303462,0,0,0,0,0.245772908753719,0,0.19998739585493,0.320075189082423,0.688859918643263,0,0,0,0,0.895260599125562,0.107824811396682,1.10086159299127,0,0.169732529954025,0,0,0,0.636008701306837,0.315446980005013,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.207471757392654,0,0,0.196295437002051,0.11796972334774,0.183428598521679,0.231051332300676,0,0.690359926060101,0.596748666348824,0.150420656698515,0,0,0.261906694481422,0.163771917510097,0.591424344868181,0.270150338473579,0,0,0.19024743058172,0,0,0,0,0,0,0,0.606965604236632,0,0.354809480650555,0.115233987555779,0.171488009437418,0.543757863814654,0.197318320688547,0.236387681767936,0,0.078493092850514,0.314231179832004,0,0.913158720509496,0.215927591218621,0,0,0.316027223465453,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0.490751168076215,0.121917924982269,0,0,0,0,0.233939463462106,0.397901550322736,0.237840181555137,0.33883824611688,0.219881033490858,0.301925687133347,0.154348316215889,0.218559560503957,0.470317296361523,0,0.235676547101626,0.392616934229891,0.297046400327086,0.8453114551668,0,0,0.193373663920732,0,0,0,0.401206833445841,0,0,0,0.315543124386369,0.203974470572744,0,0,0.743990036333503,0,0,0.378499274505237,0.437062287854782,0,0.305966489225945,0.26721740526556,0.36757959813938,0.250707539292375,0.151557396436479,0.535928260312357,0,0,0,0.23806443146374,0.193766729508018,0.31037357147929,0,1.20929600728513,0.404234377916439,0,0,0.202056159043763,0.286888821570705,0,0.244209805832924,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p3@PTPLAD1 | |short_description=p3@PTPLAD1 | ||
}} | }} |
Latest revision as of 15:19, 18 September 2015
Short description: | p3@PTPLAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPLAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 131bp_to_NM_016395, uc002apb.1, uc002apc.2, uc010uiw.1_5end |
EntrezGene: | PTPLAD1 |
HGNC: | 24175 |
UniProt: | Q9P035 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.45e-21 | 1 |
seminiferous tubule epithelial cell | 3.45e-21 | 1 |
Sertoli cell | 3.45e-21 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.45e-21 | 1 |
seminiferous tubule of testis | 3.45e-21 | 1 |
epithelium of male gonad | 3.45e-21 | 1 |
epithelial cord | 3.45e-21 | 1 |
sex cord | 3.45e-21 | 1 |
seminiferous tubule epithelium | 3.45e-21 | 1 |
testis sex cord | 3.45e-21 | 1 |
genital ridge | 3.45e-21 | 1 |
primitive sex cord of indifferent gonad | 3.45e-21 | 1 |
coelomic epithelium | 3.45e-21 | 1 |
epithelium of gonad | 2.73e-11 | 2 |