Personal tools

FFCP PHASE1:Hg19::chr17:10560619..10560631,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=4621
|EntrezGene=4621
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=7573
|HGNC=7573
|TSSclassifier=strong
|UniProt=P11055
|UniProt=P11055
|association_with_transcript=0bp_to_NM_002470_5end
|association_with_transcript=0bp_to_NM_002470_5end
|cluster_id=chr17:10560619..10560631,-
|coexpression_cluster_id=C134
|description=CAGE_peak_1_at_MYH3_5end
|description=CAGE_peak_1_at_MYH3_5end
|id=chr17:10560619..10560631,-
|id=chr17:10560619..10560631,-
|ontology_enrichment_celltype=CL:0000188!2.26e-17!9;CL:0000594!2.73e-08!3;CL:0000680!8.54e-07!57;CL:0000056!8.54e-07!57;CL:0000355!8.54e-07!57
|ontology_enrichment_celltype=CL:0000188!2.26e-17!9;CL:0000594!2.73e-08!3;CL:0000680!8.54e-07!57;CL:0000056!8.54e-07!57;CL:0000355!8.54e-07!57
|ontology_enrichment_celltype_v019=CL:0000188;4.57e-34;9!CL:0000680;6.99e-17;7!CL:0000594;3.35e-15;3!CL:0002615;3.65e-07;3!CL:0000515;4.07e-07;3
|ontology_enrichment_celltype_v019_2=CL:0000188,4.98e-34,9;CL:0000594,3.69e-15,3;CL:0000680,1.74e-09,58;CL:0000056,1.74e-09,58;CL:0000355,1.74e-09,58;CL:0002615,3.76e-07,3;CL:0000187,5.56e-07,55
|ontology_enrichment_development_v019=CL:0000355;2.28e-07;58
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002385!2.39e-11!63;UBERON:0001015!2.39e-11!63;UBERON:0000383!2.39e-11!63;UBERON:0001134!1.44e-10!61;UBERON:0002036!1.44e-10!61;UBERON:0003082!1.44e-10!61;UBERON:0004290!1.62e-09!70;UBERON:0007023!1.82e-08!115;UBERON:0000914!4.09e-08!83;UBERON:0002329!4.09e-08!83;UBERON:0003077!4.09e-08!83;UBERON:0003059!4.09e-08!83;UBERON:0007282!4.09e-08!83;UBERON:0009618!4.09e-08!83;UBERON:0007285!4.09e-08!83;UBERON:0006947!1.51e-07!3;UBERON:0004054!1.51e-07!3;UBERON:0000486!2.32e-07!82;UBERON:0005256!6.87e-07!143
|ontology_enrichment_uberon_v019=UBERON:0001134;2.62e-49;16!UBERON:0002036;2.62e-49;16!UBERON:0002385;2.09e-27;31!UBERON:0001015;2.09e-27;31!UBERON:0000383;2.09e-27;31!UBERON:0000341;7.73e-11;2!UBERON:0003127;8.96e-11;2!UBERON:0003688;1.40e-07;6!UBERON:0002358;1.40e-07;6!UBERON:0003684;1.40e-07;6!UBERON:0001178;1.40e-07;6!UBERON:0002204;9.96e-07;70
|ontology_enrichment_uberon_v019_2=UBERON:0002385,8.24e-16,64;UBERON:0001015,8.24e-16,64;UBERON:0000383,8.24e-16,64;UBERON:0001134,2.69e-14,62;UBERON:0002036,2.69e-14,62;UBERON:0003082,2.69e-14,62;UBERON:0002329,4.55e-12,71;UBERON:0003059,4.55e-12,71;UBERON:0007282,4.55e-12,71;UBERON:0004290,4.55e-12,71;UBERON:0009618,4.55e-12,71;UBERON:0003077,7.42e-12,72;UBERON:0007285,7.42e-12,72;UBERON:0007524,1.20e-11,73;UBERON:0005256,2.89e-11,122;UBERON:0000341,7.73e-11,2;UBERON:0003127,9.41e-11,2;UBERON:0007503,1.07e-10,78;UBERON:0002100,1.64e-10,199;UBERON:0000486,7.38e-10,83;UBERON:0003688,1.44e-07,6;UBERON:0002358,1.44e-07,6;UBERON:0003684,1.44e-07,6;UBERON:0001178,1.44e-07,6;UBERON:0003104,1.46e-07,160;UBERON:0009142,1.46e-07,160;UBERON:0000490,1.73e-07,148;UBERON:0002204,6.21e-07,167
|phase1_expression=0,0,3.80576891059122,0,2.23480547213644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,1.7516592782075,0,0,0,0,0,0.538168907066586,0.427114777637135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5812195939759,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,4.92256442669769,0.410952645100767,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,60.3932425907106,0,0,0,0,0,0,0,0,0,3.45975702990393,0,0.804269605718038,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.183138929636687,0.165018999841176,0,0,0,9.6670718292122,10.9374518151398,25.1746026550852,41.6266448903282,1.18162269355101,19.1422035966782,44.4882995112047,504.811642117001,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,1.54911749049875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,3.15658898038188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,494.387830736054,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89234671077684,0,0,0,0,9.69890164884194,0,31.411322968494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757612021100357,4.77979013329893,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994581110581374,0,0,0,0,0,0,0,0,0,0,0,0,19.8484471355718,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,1.49136876415977,0.157115589916002,0,0.913158720509496,0,0,0,0,0,2.60787408453869,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,8.21302454849976,2515.63750157255,219.541368862731,0,0,0,0,0,0,0,0,0,8.33504293963279,0,0,0,9.2984260068348,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,1.11598505450025,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,2.55880778281177,353.049551860727,0.387533459016037,1.30356900021302,0,0.0636471582781649,17.3820782504069,0.653150243690884,151.267119079694,0.471464371102113,2.36683277795832,69.8586748746628,0,0,0,0,30.5033225124491,0.488965776731466,0.406896178315738,0,0.201273793591026,0
|phase1_expression=0,0,3.80576891059122,0,2.23480547213644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,1.7516592782075,0,0,0,0,0,0.538168907066586,0.427114777637135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5812195939759,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,4.92256442669769,0.410952645100767,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,60.3932425907106,0,0,0,0,0,0,0,0,0,3.45975702990393,0,0.804269605718038,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.183138929636687,0.165018999841176,0,0,0,9.6670718292122,10.9374518151398,25.1746026550852,41.6266448903282,1.18162269355101,19.1422035966782,44.4882995112047,504.811642117001,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,1.54911749049875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,3.15658898038188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,494.387830736054,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89234671077684,0,0,0,0,9.69890164884194,0,31.411322968494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757612021100357,4.77979013329893,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994581110581374,0,0,0,0,0,0,0,0,0,0,0,0,19.8484471355718,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,1.49136876415977,0.157115589916002,0,0.913158720509496,0,0,0,0,0,2.60787408453869,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,8.21302454849976,2515.63750157255,219.541368862731,0,0,0,0,0,0,0,0,0,8.33504293963279,0,0,0,9.2984260068348,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,1.11598505450025,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,2.55880778281177,353.049551860727,0.387533459016037,1.30356900021302,0,0.0636471582781649,17.3820782504069,0.653150243690884,151.267119079694,0.471464371102113,2.36683277795832,69.8586748746628,0,0,0,0,30.5033225124491,0.488965776731466,0.406896178315738,0,0.201273793591026,0
|short_description=p1@MYH3
|short_description=p1@MYH3
}}
}}

Latest revision as of 15:17, 18 September 2015

Short description:p1@MYH3
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_MYH3_5end
Coexpression cluster:C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis
Association with transcript: 0bp_to_NM_002470_5end
EntrezGene:MYH3
HGNC: 7573
UniProt: P11055
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
500
1000
1500
2000
2500
3000




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr17:10560619..10560631,-&oldid=4111539"