FFCP PHASE1:Hg19::chr3:48723281..48723354,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:48723281..48723354,-
|short_description=p1@NCKIPSD
|description=CAGE_peak_1_at_NCKIPSD_5end
|association_with_transcript=0bp_to_ENST00000341520,ENST0000041...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51517 | |EntrezGene=51517 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15486 | |HGNC=15486 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZQ3 | |UniProt=Q9NZQ3 | ||
|association_with_transcript=0bp_to_ENST00000341520,ENST00000416649,NM_016453,NM_184231,uc003cum.2,uc003cun.2,uc010hkh.1_5end | |||
|cluster_id=chr3:48723281..48723354,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_NCKIPSD_5end | |||
|id=chr3:48723281..48723354,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.92e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.39e-24!57;UBERON:0005068!2.39e-24!57;UBERON:0006241!2.39e-24!57;UBERON:0007135!2.39e-24!57;UBERON:0007023!1.88e-23!115;UBERON:0003075!3.46e-23!86;UBERON:0007284!3.46e-23!86;UBERON:0002616!7.56e-22!59;UBERON:0000955!1.12e-21!69;UBERON:0006238!1.12e-21!69;UBERON:0001017!1.20e-21!82;UBERON:0002346!1.77e-21!90;UBERON:0005743!4.50e-21!86;UBERON:0000073!1.86e-19!94;UBERON:0001016!1.86e-19!94;UBERON:0003080!3.34e-19!42;UBERON:0002780!5.10e-19!41;UBERON:0001890!5.10e-19!41;UBERON:0006240!5.10e-19!41;UBERON:0000481!6.92e-19!347;UBERON:0000064!2.23e-18!219;UBERON:0000483!9.76e-18!309;UBERON:0004121!1.67e-17!169;UBERON:0003056!2.46e-17!61;UBERON:0000119!2.51e-17!312;UBERON:0000477!1.01e-16!286;UBERON:0000924!1.18e-16!173;UBERON:0006601!1.18e-16!173;UBERON:0001893!1.58e-16!34;UBERON:0002020!2.09e-16!34;UBERON:0003528!2.09e-16!34;UBERON:0002791!7.19e-16!33;UBERON:0000475!7.40e-16!365;UBERON:0000025!1.62e-15!194;UBERON:0001869!2.16e-15!32;UBERON:0000033!1.45e-14!123;UBERON:0004111!3.23e-14!241;UBERON:0000153!1.34e-13!129;UBERON:0007811!1.34e-13!129;UBERON:0002619!1.40e-11!22;UBERON:0000956!1.83e-11!25;UBERON:0000203!1.83e-11!25;UBERON:0000062!7.79e-11!511;UBERON:0001950!2.08e-10!20;UBERON:0000922!5.85e-09!612;UBERON:0001048!2.75e-08!168;UBERON:0004119!9.42e-08!169;UBERON:0000925!9.42e-08!169;UBERON:0006595!9.42e-08!169;UBERON:0002050!1.31e-07!605;UBERON:0005423!1.31e-07!605;UBERON:0000923!1.31e-07!604;UBERON:0005291!1.31e-07!604;UBERON:0006598!1.31e-07!604;UBERON:0002532!1.31e-07!604;UBERON:0000480!2.35e-07!626;UBERON:0005177!2.78e-07!107;UBERON:0000468!3.09e-07!659;UBERON:0000467!3.85e-07!625;UBERON:0000077!7.10e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.32e-14;34!UBERON:0003528;3.92e-14;34!UBERON:0002020;3.92e-14;34!UBERON:0001869;4.92e-14;32!UBERON:0002791;5.71e-14;32!UBERON:0002780;6.83e-14;41!UBERON:0001890;6.83e-14;41!UBERON:0000073;2.13e-13;53!UBERON:0002616;2.13e-13;53!UBERON:0002619;1.17e-11;22!UBERON:0000956;1.39e-11;25!UBERON:0000203;1.39e-11;25!UBERON:0001950;1.74e-10;20!UBERON:0000955;1.78e-10;68!UBERON:0001017;2.95e-09;75!UBERON:0001016;2.12e-08;83!UBERON:0007023;4.17e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.77e-24,56;UBERON:0005068,3.77e-24,56;UBERON:0006241,3.77e-24,56;UBERON:0007135,3.77e-24,56;UBERON:0000073,4.43e-23,53;UBERON:0002616,4.43e-23,53;UBERON:0003075,5.55e-23,82;UBERON:0007284,5.55e-23,82;UBERON:0007023,7.13e-23,114;UBERON:0011216,8.84e-22,223;UBERON:0010371,1.15e-21,104;UBERON:0000955,1.88e-21,68;UBERON:0006238,1.88e-21,68;UBERON:0001017,2.05e-21,81;UBERON:0002346,3.16e-21,86;UBERON:0001016,1.15e-19,89;UBERON:0002780,5.10e-19,41;UBERON:0001890,5.10e-19,41;UBERON:0003080,5.10e-19,41;UBERON:0006240,5.10e-19,41;UBERON:0003056,1.34e-17,61;UBERON:0000483,1.93e-17,306;UBERON:0000119,4.93e-17,309;UBERON:0010314,7.81e-17,132;UBERON:0004121,7.94e-17,171;UBERON:0000924,7.94e-17,171;UBERON:0006601,7.94e-17,171;UBERON:0001893,1.58e-16,34;UBERON:0003528,2.09e-16,34;UBERON:0002020,2.09e-16,34;UBERON:0000025,1.06e-15,192;UBERON:0001869,2.16e-15,32;UBERON:0002791,2.63e-15,32;UBERON:0004111,2.87e-14,240;UBERON:0002619,1.40e-11,22;UBERON:0000956,1.83e-11,25;UBERON:0000203,1.83e-11,25;UBERON:0001950,2.08e-10,20;UBERON:0001048,5.90e-09,160;UBERON:0000922,8.11e-08,592;UBERON:0004119,1.82e-07,160;UBERON:0000925,1.82e-07,160;UBERON:0006595,1.82e-07,160;UBERON:0005177,4.74e-07,101 | |||
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| ||
|short_description=p1@NCKIPSD | |||
}} | }} |
Latest revision as of 14:52, 18 September 2015
Short description: | p1@NCKIPSD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCKIPSD_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000341520, ENST00000416649, NM_016453, NM_184231, uc003cum.2, uc003cun.2, uc010hkh.1_5end |
EntrezGene: | NCKIPSD |
HGNC: | 15486 |
UniProt: | Q9NZQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data