FFCP PHASE1:Hg19::chr10:60272624..60272640,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80114 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19351 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H694 | |||
|association_with_transcript=-259bp_to_ENST00000373886_5end | |||
|cluster_id=chr10:60272624..60272640,+ | |||
|coexpression_cluster_id=C3029 | |||
|description=CAGE_peak_1_at_BICC1_5end | |||
|id=chr10:60272624..60272640,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.07e-32!180;CL:0000057!4.17e-18!75;CL:0000680!1.76e-13!57;CL:0000056!1.76e-13!57;CL:0000355!1.76e-13!57;CL:0000187!1.01e-12!54;CL:0000183!1.66e-12!59;CL:0000393!5.98e-11!60;CL:0000211!5.98e-11!60;CL:0000192!2.49e-09!42;CL:0000514!2.49e-09!42;CL:0000359!2.46e-08!32;CL:0002494!4.96e-08!16 | |||
|ontology_enrichment_celltype_v019=CL:0002494;1.52e-08;16!CL:0000359;8.70e-08;32!CL:0000187;1.54e-07;55!CL:0000192;2.02e-07;43!CL:0000057;2.06e-07;73!CL:0002320;2.16e-07;188!CL:0002620;5.57e-07;23!CL:1000507;9.71e-07;10!CL:1000494;9.71e-07;10!CL:0000499;9.81e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.39e-19,76;CL:0000680,2.57e-13,58;CL:0000056,2.57e-13,58;CL:0000355,2.57e-13,58;CL:0000187,1.63e-12,55;CL:0000393,5.06e-10,61;CL:0000211,5.06e-10,61;CL:0000192,5.93e-09,43;CL:0000514,5.93e-09,43;CL:0002494,1.72e-08,16;CL:0000359,7.54e-08,32;CL:0002620,5.85e-07,23;CL:0000499,9.05e-07,28;CL:1000507,9.51e-07,10;CL:1000494,9.51e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.02e-07;43!CL:0000355;2.32e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!4.73e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.04e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.92e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000481!4.17e-22!347;UBERON:0005256!1.51e-21!143;UBERON:0000475!5.26e-21!365;UBERON:0000914!9.28e-18!83;UBERON:0002329!9.28e-18!83;UBERON:0003077!9.28e-18!83;UBERON:0003059!9.28e-18!83;UBERON:0007282!9.28e-18!83;UBERON:0009618!9.28e-18!83;UBERON:0007285!9.28e-18!83;UBERON:0003104!1.08e-17!238;UBERON:0009142!1.08e-17!238;UBERON:0002100!8.29e-17!216;UBERON:0004290!1.20e-15!70;UBERON:0000486!6.83e-15!82;UBERON:0001134!1.04e-14!61;UBERON:0002036!1.04e-14!61;UBERON:0003082!1.04e-14!61;UBERON:0002385!1.57e-14!63;UBERON:0001015!1.57e-14!63;UBERON:0000383!1.57e-14!63;UBERON:0000468!1.37e-13!659;UBERON:0000119!1.13e-12!312;UBERON:0000467!1.86e-12!625;UBERON:0003103!2.47e-12!69;UBERON:0000483!2.55e-12!309;UBERON:0000480!3.31e-12!626;UBERON:0000477!8.71e-11!286;UBERON:0000948!2.83e-10!24;UBERON:0005498!2.83e-10!24;UBERON:0004140!2.83e-10!24;UBERON:0009881!2.83e-10!24;UBERON:0004141!2.83e-10!24;UBERON:0003084!2.83e-10!24;UBERON:0007005!2.83e-10!24;UBERON:0004139!2.83e-10!24;UBERON:0004291!2.83e-10!24;UBERON:0003914!3.41e-10!118;UBERON:0007100!4.06e-10!27;UBERON:0003102!8.10e-10!95;UBERON:0002050!2.77e-09!605;UBERON:0005423!2.77e-09!605;UBERON:0000062!4.69e-09!511;UBERON:0000923!4.78e-09!604;UBERON:0005291!4.78e-09!604;UBERON:0006598!4.78e-09!604;UBERON:0002532!4.78e-09!604;UBERON:0000922!6.10e-09!612;UBERON:0000479!1.82e-07!787;UBERON:0002553!2.94e-07!70;UBERON:0000490!3.42e-07!138;UBERON:0003886!4.03e-07!63;UBERON:0004573!6.34e-07!33;UBERON:0004571!6.34e-07!33;UBERON:0000926!6.84e-07!448;UBERON:0004120!6.84e-07!448;UBERON:0006603!6.84e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;2.10e-10;22!UBERON:0007100;3.60e-10;25!UBERON:0002385;1.13e-09;31!UBERON:0001015;1.13e-09;31!UBERON:0000383;1.13e-09;31!UBERON:0002204;1.57e-07;70!UBERON:0004573;7.78e-07;33!UBERON:0004571;7.78e-07;33!UBERON:0004211;9.71e-07;10!UBERON:0009773;9.71e-07;10!UBERON:0001231;9.71e-07;10!UBERON:0004810;9.71e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.45e-22,160;UBERON:0009142,1.45e-22,160;UBERON:0005256,2.41e-16,122;UBERON:0007503,6.03e-16,78;UBERON:0007524,6.07e-16,73;UBERON:0002329,1.18e-15,71;UBERON:0003059,1.18e-15,71;UBERON:0007282,1.18e-15,71;UBERON:0004290,1.18e-15,71;UBERON:0009618,1.18e-15,71;UBERON:0003077,1.70e-15,72;UBERON:0007285,1.70e-15,72;UBERON:0002100,3.64e-15,199;UBERON:0001134,1.31e-14,62;UBERON:0002036,1.31e-14,62;UBERON:0003082,1.31e-14,62;UBERON:0002385,1.91e-14,64;UBERON:0001015,1.91e-14,64;UBERON:0000383,1.91e-14,64;UBERON:0000486,5.86e-14,83;UBERON:0003103,2.59e-12,68;UBERON:0003914,2.32e-11,117;UBERON:0000948,6.85e-11,24;UBERON:0005498,6.85e-11,24;UBERON:0004140,6.85e-11,24;UBERON:0009881,6.85e-11,24;UBERON:0004141,6.85e-11,24;UBERON:0003084,6.85e-11,24;UBERON:0007005,6.85e-11,24;UBERON:0004139,6.85e-11,24;UBERON:0004291,6.85e-11,24;UBERON:0007100,1.01e-10,27;UBERON:0000119,1.89e-09,309;UBERON:0000490,3.15e-09,148;UBERON:0000483,3.93e-09,306;UBERON:0003102,9.53e-09,99;UBERON:0004573,1.55e-07,33;UBERON:0004571,1.55e-07,33;UBERON:0000479,6.04e-07,773;UBERON:0004810,9.51e-07,10 | |||
|phase1_expression=12.1724514111273,15.4152377201508,11.2763523276777,14.0102617694383,9.38618298297304,13.0850778615055,7.59899634504932,4.42203911398782,15.4099520637905,4.91467873003018,2.09340350391728,0.218441372130172,0.263766978228454,6.55961670688247,14.2500871563004,10.0848771967766,11.4511960324556,13.1455816269727,11.2224543721817,3.93987385845721,8.77202972350288,4.38836610069323,2.86235987131057,1.50561867580173,2.13422487311165,0,0,0,0,0,0.309632246632152,2.75826367343678,0,0,0,2.41687695228617,0.587200878669695,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,107.275021178143,17.4382223522945,15.7270951067542,22.4092274478431,32.0856262806969,35.342550626441,11.1340032587154,17.5188553308949,0.945348171640679,3.54767035940102,6.0606002128257,7.7932549921139,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,2.58070378531837,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,13.4182426957736,15.5755529347433,37.0745706277013,46.4675325613078,20.9254345497031,31.9586232081115,11.7423895302675,9.37336683985208,54.4619311949591,15.7611486321535,13.2404141521902,10.2923050798553,13.25204626304,1.87457145467037,3.1216007683032,2.2818872861778,4.63290909710583,2.58355897016283,4.37056949793955,4.07307339436521,11.2284794190191,3.80786383666481,20.4585046728016,45.144108576718,49.4533858557114,1.82032272387605,2.15585442544872,4.71341119071385,5.00474079487857,16.3467828135668,26.3386572528503,28.5033650093088,72.8654585696994,8.16711718752151,11.1221574127094,24.3455423253167,22.4647815229136,7.20218630602566,27.2058677189479,17.5195567231028,13.9587642248692,6.91982962189192,20.7540820993353,28.0201489410967,31.9413148288779,44.7759577388109,7.4552014428489,5.74286959897549,8.30846902321389,3.09217365061275,0.818238361772504,5.44928731239107,0.121973706129595,0,0.464775771478074,0,0,0.36497735907583,20.3384392028761,27.0161194041012,8.28809528114883,15.7885095530873,5.77503585335668,8.39978280282892,10.6208354749204,10.3634742849897,5.95587452754927,9.36881609597346,8.77901290711057,9.03369764673102,6.67152981426177,11.9271618653381,0,0,3.7041661019826,5.88034845542168,0,0,3.54473944008842,0,16.9724045189497,2.91665277507493,0.98775256867763,0,0.402115889646523,0.462942225792648,0.651616610620649,0,1.44331342025273,0.811512834825538,14.6760867794777,0,0,0,0,0,0,0,0,0.93733833986777,2.18376766658517,0.850650583454319,2.23896306757121,0.581267877027924,3.83382679165211,0,0,0,0.288239906833923,0.50496973370552,1.07946420296687,0.763976851116555,1.17217447210047,1.71072446022705,1.33675740514321,0,0.285826432630578,5.7186853016134,7.84728123899904,4.400297149257,6.85140093516222,14.3062578340753,2.535908257668,4.78688609852767,2.08014873822732,3.60090323966999,1.41849132023278,1.0656887160644,5.43316375900961,0,2.46972101034231,2.28015329005615,7.46323092359346,0.791951872933429,19.5935595088731,33.1182714268112,13.8962457743059,0,0,0,7.18874566474748,5.7430967917057,9.98458335285029,9.41078493339265,12.328579353023,11.6389626105932,0,0,0.215627574859517,0,0.76228387266739,1.30139853857622,1.54657762555539,1.17261385734044,0.637938751653163,0,0,0,15.827202431769,6.5022167737758,8.13795071099207,21.0050570146115,20.1624757340793,20.1859091243436,42.1709093973767,37.9192085656926,27.2889004867182,14.4862299809507,15.277188766315,16.4088560002116,10.5998009651061,0.391602314925481,1.37257369524342,0.206768026122887,0,0,0.303127571446259,0,0.604780586659361,15.8788997004017,22.8658340199213,15.9976253826852,19.8615681346337,12.7926812266676,15.2811225086427,17.8101679733989,14.4957112174496,21.6625304882015,12.6475820261266,7.78881643775432,10.2265133044764,9.18531816896329,7.21823293091825,0.184161977871793,9.41478474949775,6.73737321624853,18.7507913391977,12.1823895485001,36.4282544503882,32.1583405362511,17.5367069583913,36.0986570813635,1.13733384070897,0.170093705276516,26.9894895127674,1.54227252690289,16.7986791277189,20.0675909541941,20.3901018436031,19.9458242142894,27.3127200761058,0,0,0.512900250232778,0.656029291399411,0.325378394664303,2.98818933778395,13.2775723986598,8.66349749166174,2.29706215198469,4.55042172225565,30.5299466703903,9.28038895604371,4.62145851343933,6.7541616879497,9.78639664640167,18.3688618724748,17.4020032697074,8.26698285936179,18.4296313788746,0.495854746082934,2.88285101047659,7.91198817466422,0.4046311234222,26.9610418592426,28.6479235615882,26.4874162661028,17.249880489861,7.45228442443831,19.1385258256516,14.6406133092097,16.745611748813,7.44316738719335,10.7569004404367,17.3473476470681,2.303080121802,10.2705357128141,20.6832111151859,14.1290755235861,14.5696690642485,11.5305552489143,9.66061699234629,7.27856933663938,11.0957224821106,20.6416643557101,3.90106991271672,8.77368562672624,6.33900880540533,9.14549406433505,14.9889757870936,16.9512174930364,15.9895949628376,11.2784625791007,19.2918389511656,0.578775534266688,11.8061055368394,2.23201414658974,3.717881977197,5.07052084558035,0.717056761020258,0.982490410131212,0.7133421029625,2.12856638442359,49.3991866596534,38.1982075833486,4.55367808518858,6.29882496440969,0.0962221127255121,1.34060455107157,0,3.29503302718727,0.43050537267123,3.36942951335251,0.886860307073351,4.13502120372527,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.447352215784832,0.500547425135725,0,0,0,0,0,0,0,6.73937624650712,0,0,3.12549761487054,0,0,0,1.9882952955326,0.422008249231538,12.1326488474967,0,1.05562704063997,7.57142355354065,5.52567831062295,0,33.1350531306982,0,4.0435146396035,18.692617038644,4.29650819221462,0.511572370226872,6.90503839458535,0,20.0046582260346,0.969332746095218,0.556608588971108,0,0,0,7.24999575434793,0,0,0,0.344743373241465,0.291604613383254,2.77799991893268,2.65722415744152,1.20596438625408,0,0.331737779793674,0,6.14279112031123,0,0,7.46417507486832,28.5994560175973,0,0,0,0.957003479195758,7.14461228534526,1.06606955203727,0,0,0,0,0,0,0,0,25.7417638724193,35.5847521786942,26.7157305010148,1.08194319871046,1.99052386215701,5.04208117669033,8.55442202907076,0.889563386041866,0.370691816839509,0.626531697032732,1.07841812769083,13.6438200040794,1.63985112007737,0,0.19566461893209,0,3.55125962564451,6.04953580243319,1.83643656978294,32.2251556105289,0.901940516486955,1.65901106235595,1.99396161812156,1.323967823502,0.313932918407225,3.58417289318877,72.0062151455376,0.138674673013139,0.867798691675654,0,2.78589461057288,11.1825067674899,1.89184635718778,0.19351266257817,1.0232504392066,0.739039113478883,5.91633000579358,0,11.2990370390266,2.46675464364152,7.7498698564166,1.89932387867636,2.34661659281764,0,13.4475386685792,0,0,0,2.4023299700675,0,0.124252535565433,2.59263438078475,1.08723364858891,0.836822770498666,11.0158075047228,4.33425884852278,0,0.684526894459965,7.66479528401834,24.9263956023575,0,33.2346057513982,15.3537484087828,29.4327940076494,3.19486400798386,1.71690419254628,11.8280872444192,8.33075058835406,18.735593944205,0,1.57566364614447,1.81314888438566,2.2243169471881,15.7483970423598,0,0.795229689809303,0.681017030557878,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0.971992906528395,0,28.9216945788057,29.8466606488139,0.316801009558219,0,2.30298236783334,12.8645158747206,3.31045985182716,0,0.542999601753713,0,5.55198512185996,8.38111340937412,0,3.74853647927928,7.81853431488867,1.75862680413699,6.62534444561107,0.775697738169303,0.52893040697076,30.7956308191793,0,4.69864615297857,14.4627960691693,4.55662960881915,5.95399226174341,0,0,0,2.72008901684737,1.5041393641362,0.612691153526923,1.31149052283922,0.942324577501406,0.886068179966986,1.34228891392159,1.1267183763585,1.14681839138014,1.99672292766334,2.11127770000704,20.3372493356259,0.499921631848426,1.51649117541648,0,0.235265819698172,0.936669811613763,0.579684114443301,19.8508887839543,35.9918497164726,11.6509230915549,41.8580641657947,54.3386667785562,37.3720713070545,15.3322845825939,32.3634176853332,32.0200633200528,29.7188851479164,34.248804940196,11.2450778040901,26.8604915395929,16.5882483136342,15.9505028734797,7.30443086536427,17.880655470669,13.7089876380766,10.5786390633212,35.096791226094,16.2189941134158,34.802531990887,11.9428766609585,1.20008329398946,29.5320306457202,29.297205522635,11.3566408405786,2.69667762570225,1.28664954824955,3.13193150358254,6.12105998883135,3.47283711485751,1.46842022703881,1.07453304648892,0.308801447160972,0,3.7104720648635,0.578742114812744,0,50.4795791618255,0,0.303859956177382,1.7973596699725,0,0,0.163565394255844,4.25892803500336,3.44082072255207,0.211312123358627,5.39965968808311,1.49368421571797,0,15.8904466998714,9.9417213135994,0,0,0.895260599125562,1.61737217095023,2.20172318598255,3.27628914576042,0,0.425149840203366,1.48722917110803,0,10.1761392209094,0,0,19.7498528466783,10.718591707362,0.899209151350433,1.41696576325585,0.798169295285756,1.02558182120378,1.51243017733031,1.03735878696327,1.61475645631851,4.28308260777463,0,0,1.28400018965175,1.03973099535304,6.86487771840901,4.8325194824207,12.1338895490928,15.3429069832485,6.85797233591968,18.7563362695942,0,7.53350820546445,0,0.742913430802341,0.781078098613847,0.826747186004736,1.39514782426595,1.64092442705466,1.09651553371436,8.435590032618,0,0.127762427639595,3.21421101526972,1.00885116665647,4.24875922965642,2.04895972216168,1.68534503309014,0.806637912890455,26.237665443925,0.611727596791485,1.05236437700559,3.30942754475111,3.67063626243828,5.65150268523701,0.628462359664008,0.840816489941367,22.8289680127374,25.6953833550159,11.9437921971763,19.0127607509906,0.316027223465453,0,14.9518114180218,68.9471773668017,6.2164849248911,3.0729325876911,11.7514142508396,2.58136415292167,5.44327203360601,4.51631045223536,2.11693525095465,7.7896335304977,6.2041277132864,9.55538938977433,37.4715696522604,0,0,17.4805786040732,6.26243121823107,19.7168453327494,7.28566489588709,1.63757624423474,0,0,0.67767649223376,0.659643100472575,0.754814217833368,1.23478652972711,3.27839340755936,0,4.90296643507811,0,4.3187862765288,0.297046400327086,14.3702947378356,16.8227843540939,1.59772660565751,2.38494185502236,0,0,0.352894871715692,0,11.6853822119443,3.66983426723633,0.573358332605805,0,0.611923411718232,2.61810414204226,8.99345628876181,78.1189538150178,72.0993980665013,41.09952340176,0,0.109265571963696,0.126698501011437,0.509944148709909,0.26721740526556,0,0,5.45606627171324,3.21556956187414,1.65833887891756,1.34462894620464,9.80876316744512,17.1406390653893,0.516711278688049,2.17261500035503,2.4669009767735,1.97306190662311,7.07410161353767,6.31378568901188,5.4757328173645,1.68380132536469,8.03288700397975,38.2559410027915,1.62806537221949,0.960546112899439,71.4367444461678,9.79094702961797,4.69281884806909,5.98983076496046,14.6482624193666,7.98908129022615,7.04458277568592,0 | |||
|short_description=p1@BICC1 | |||
}} |
Latest revision as of 14:46, 18 September 2015
Short description: | p1@BICC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BICC1_5end |
Coexpression cluster: | C3029_Cardiac_tridermal_sacrococcigeal_mesothelioma_endometrial_tenocyte_Fibroblast |
Association with transcript: | -259bp_to_ENST00000373886_5end |
EntrezGene: | BICC1 |
HGNC: | 19351 |
UniProt: | Q9H694 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.39e-19 | 76 |
muscle precursor cell | 2.57e-13 | 58 |
myoblast | 2.57e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.57e-13 | 58 |
muscle cell | 1.63e-12 | 55 |
electrically responsive cell | 5.06e-10 | 61 |
electrically active cell | 5.06e-10 | 61 |
smooth muscle cell | 5.93e-09 | 43 |
smooth muscle myoblast | 5.93e-09 | 43 |
cardiocyte | 1.72e-08 | 16 |
vascular associated smooth muscle cell | 7.54e-08 | 32 |
skin fibroblast | 5.85e-07 | 23 |
stromal cell | 9.05e-07 | 28 |
kidney tubule cell | 9.51e-07 | 10 |
nephron tubule epithelial cell | 9.51e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.92e-07 | 14 |