FFCP PHASE1:Hg19::chr10:60272584..60272605,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:60272584..60272605,+
|short_description=p3@BICC1
|description=CAGE_peak_3_at_BICC1_5end
|association_with_transcript=-294bp_to_ENST00000373886_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80114 | |EntrezGene=80114 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19351 | |HGNC=19351 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H694 | |UniProt=Q9H694 | ||
|association_with_transcript=-294bp_to_ENST00000373886_5end | |||
|cluster_id=chr10:60272584..60272605,+ | |||
|description=CAGE_peak_3_at_BICC1_5end | |||
|id=chr10:60272584..60272605,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.48e-33!180;CL:0000057!5.68e-21!75;CL:0000680!9.41e-12!57;CL:0000056!9.41e-12!57;CL:0000355!9.41e-12!57;CL:0000187!1.67e-11!54;CL:0000183!8.33e-11!59;CL:0000393!1.24e-09!60;CL:0000211!1.24e-09!60;CL:0002620!1.32e-08!23;CL:0000192!1.76e-08!42;CL:0000514!1.76e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.19e-09;23!CL:0000057;7.38e-09;73!CL:0000187;1.06e-07;55!CL:0002320;1.95e-07;188!CL:0000192;7.18e-07;43!CL:0000499;8.23e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.00e-23,76;CL:0000187,6.76e-13,55;CL:0000680,8.45e-13,58;CL:0000056,8.45e-13,58;CL:0000355,8.45e-13,58;CL:0000393,7.15e-10,61;CL:0000211,7.15e-10,61;CL:0002620,1.71e-09,23;CL:0000192,2.40e-09,43;CL:0000514,2.40e-09,43;CL:0000499,6.75e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;7.18e-07;43!CL:0000355;9.58e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.88e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.55e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.40e-08,14;DOID:120,9.63e-07,27;DOID:193,9.66e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000475!7.46e-21!365;UBERON:0000481!1.36e-19!347;UBERON:0005256!9.65e-18!143;UBERON:0000914!1.70e-16!83;UBERON:0002329!1.70e-16!83;UBERON:0003077!1.70e-16!83;UBERON:0003059!1.70e-16!83;UBERON:0007282!1.70e-16!83;UBERON:0009618!1.70e-16!83;UBERON:0007285!1.70e-16!83;UBERON:0002100!7.47e-15!216;UBERON:0003104!8.85e-15!238;UBERON:0009142!8.85e-15!238;UBERON:0004290!1.46e-13!70;UBERON:0000486!7.27e-13!82;UBERON:0000468!1.41e-12!659;UBERON:0001134!1.72e-12!61;UBERON:0002036!1.72e-12!61;UBERON:0003082!1.72e-12!61;UBERON:0002385!1.78e-12!63;UBERON:0001015!1.78e-12!63;UBERON:0000383!1.78e-12!63;UBERON:0003102!7.67e-11!95;UBERON:0000467!8.42e-11!625;UBERON:0000119!1.21e-10!312;UBERON:0000480!1.41e-10!626;UBERON:0000483!3.66e-10!309;UBERON:0000062!3.33e-09!511;UBERON:0000477!2.23e-08!286;UBERON:0002050!6.32e-08!605;UBERON:0005423!6.32e-08!605;UBERON:0000922!7.11e-08!612;UBERON:0000923!1.19e-07!604;UBERON:0005291!1.19e-07!604;UBERON:0006598!1.19e-07!604;UBERON:0002532!1.19e-07!604;UBERON:0003103!2.51e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.26e-08;31!UBERON:0001015;2.26e-08;31!UBERON:0000383;2.26e-08;31!UBERON:0002204;3.36e-07;70!UBERON:0002384;8.03e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,7.46e-19,160;UBERON:0009142,7.46e-19,160;UBERON:0007524,1.63e-15,73;UBERON:0002329,5.35e-15,71;UBERON:0003059,5.35e-15,71;UBERON:0007282,5.35e-15,71;UBERON:0004290,5.35e-15,71;UBERON:0009618,5.35e-15,71;UBERON:0003077,5.53e-15,72;UBERON:0007285,5.53e-15,72;UBERON:0007503,3.21e-14,78;UBERON:0001134,1.24e-13,62;UBERON:0002036,1.24e-13,62;UBERON:0003082,1.24e-13,62;UBERON:0002385,2.75e-13,64;UBERON:0001015,2.75e-13,64;UBERON:0000383,2.75e-13,64;UBERON:0005256,5.47e-13,122;UBERON:0000486,1.54e-12,83;UBERON:0002100,4.11e-11,199;UBERON:0003102,1.61e-09,99;UBERON:0000119,2.50e-07,309;UBERON:0000479,4.66e-07,773;UBERON:0000483,6.54e-07,306 | |||
|phase1_expression=2.90685406832891,1.92690471501885,3.52386010239928,4.00293193412522,3.12872766099101,2.61701557230111,0,0.631719873426831,2.08948502559871,0.982935746006035,1.39560233594486,0,0,2.72285976512103,7.29074226601415,4.70627602516243,1.80808358407193,2.92124036154949,1.46379839637152,1.96993692922861,3.4680117511523,1.56727360739044,1.14494394852423,1.09499540058307,1.88313959392204,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,2.70121541726101,0.880801318004542,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0.64290234678832,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,5.62595272111533,5.78302643815306,4.51204119572301,4.77993512570718,0.795285947051099,5.35298357332899,1.32348744029695,2.21729397462564,1.84453049955565,2.48860243445654,0.728590576585084,0.370784442784429,0,0,0,0,0,1.11437250398869,0,0,0.347140501607594,0,0,0,0,0,0.71153252537342,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,5.4666914686485,2.78587125662075,8.73900593367244,8.89193524321323,4.25602058638028,3.36406560085384,6.4049397437823,0.49333509683432,9.64754209739275,3.63718814588158,3.43269996538263,4.08665054641315,4.03323147135999,0.468642863667593,2.80944069147288,2.85235910772225,2.98897361103602,3.28816596202542,1.61872944368132,3.08991774744947,5.51216262388212,2.08818339430006,7.64610780700664,4.75201142912821,6.92347401979959,1.82032272387605,2.15585442544872,2.86171393721913,4.8796222750066,6.64953877162039,6.58466431321257,4.59731693698529,9.6152357700222,2.49550802952046,3.58779271377724,6.83383644219416,5.93409323246773,2.10063767259082,6.69841440049853,6.95629458123199,4.46680455195816,4.21940830603166,4.87185025805993,5.80597680761463,8.19244097916464,13.739914829599,2.4850671476163,2.61955455391865,1.3564847384839,0.773043412653187,0.545492241181669,2.58124135850103,0.121973706129595,0.397589304964456,0.348581828608555,0.310983165046111,0,0,3.12899064659632,5.14592750554308,0,3.25057549622385,1.44375896333917,1.8929088006375,2.36018566109342,2.89213235860178,1.21323370005633,1.52515610864684,1.66089433377768,2.29213223872279,0.98110732562673,4.23221872641029,0,0,2.057870056657,4.41026134156626,0,0,0,0,3.68965315629341,2.23038153388083,1.20725313949488,0,0.402115889646523,0.925884451585296,1.3032332212413,3.11980435583874,0,0.695582429850461,9.7449216215732,0,0,0,0,0,0,0,0,0.93733833986777,1.51183915378974,0,1.16426079513703,0.581267877027924,1.91691339582606,0,0,0,0,0,1.07946420296687,0.763976851116555,1.17217447210047,1.71072446022705,1.43958489784653,0,0.857479297891735,2.69114602428866,3.92364061949952,2.2001485746285,2.06834745212444,7.15312891703765,3.381211010224,2.39344304926383,0,1.02882949704857,1.41849132023278,1.0656887160644,5.00422977803516,1.62786481617433,0.823240336780769,1.95441710576241,4.6200953336531,0.791951872933429,3.01439377059586,2.61460037580088,3.89894665610022,0,0,0,1.91699884393266,1.14861935834114,4.27910715122155,0.868687840005475,3.6985738059069,2.32779252211864,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,8.46571292862065,1.50051156317903,5.15403545029498,5.61521326133179,3.21172179834891,3.15404830067869,7.02848489956279,6.62081419400982,2.27407504055985,3.10419213877515,1.99267679560631,2.94990669666725,4.69171518127647,1.17480694477644,1.02943027143257,0,0,0,0,0,0,4.46594054073798,6.44540287809862,3.36792113319688,5.38184426873944,5.11707249066703,3.53878626515936,1.48418066444991,3.23840356985577,3.72879623157567,3.77784917663522,2.07701771673448,3.83494248917865,2.90062679019893,2.40607764363942,0.552485933615378,2.52591785962135,2.36718518408732,3.93373244878272,5.41439535488894,6.54630365387526,7.84349769176855,0,4.96092655796516,0,0,2.15915916102139,1.54227252690289,2.16757150035082,1.50506932156456,4.33289664176565,5.81753206250107,3.80587083027703,0,0,0.256450125116389,0.656029291399411,0.976135183992909,1.33953315142039,3.38807019827871,3.96045599618822,0,2.60024098414608,6.42735719376638,4.25351160485337,2.61882649094895,3.07007349452259,4.27293374702045,6.66005518183296,5.80066775656914,3.66474497889234,3.82837753280971,0.495854746082934,1.92190067365106,8.80527716212631,0.708104465988849,2.32422774648643,7.870308670766,2.0911118104818,3.69640296211307,2.12922412126809,4.34966496037536,3.7064843820784,3.00562262158182,6.69885064847401,3.48017367190598,5.3376454298671,1.02359116524534,3.42351190427136,4.13664222303718,1.56989728039846,7.91438813366585,3.0199073270966,5.06593330086452,2.02182481573316,1.58510321173008,4.63384301862879,1.46290121726877,1.94970791705028,3.16950440270266,5.59649636772742,5.37340641424108,1.13008116620243,3.85955740482287,2.65375590096488,2.6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|phase1_expression=2.90685406832891,1.92690471501885,3.52386010239928,4.00293193412522,3.12872766099101,2.61701557230111,0,0.631719873426831,2.08948502559871,0.982935746006035,1.39560233594486,0,0,2.72285976512103,7.29074226601415,4.70627602516243,1.80808358407193,2.92124036154949,1.46379839637152,1.96993692922861,3.4680117511523,1.56727360739044,1.14494394852423,1.09499540058307,1.88313959392204,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,2.70121541726101,0.880801318004542,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0.64290234678832,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,5.62595272111533,5.78302643815306,4.51204119572301,4.77993512570718,0.795285947051099,5.35298357332899,1.32348744029695,2.21729397462564,1.84453049955565,2.48860243445654,0.728590576585084,0.370784442784429,0,0,0,0,0,1.11437250398869,0,0,0.347140501607594,0,0,0,0,0,0.71153252537342,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,5.4666914686485,2.78587125662075,8.73900593367244,8.89193524321323,4.25602058638028,3.36406560085384,6.4049397437823,0.49333509683432,9.64754209739275,3.63718814588158,3.43269996538263,4.08665054641315,4.03323147135999,0.468642863667593,2.80944069147288,2.85235910772225,2.98897361103602,3.28816596202542,1.61872944368132,3.08991774744947,5.51216262388212,2.08818339430006,7.64610780700664,4.75201142912821,6.92347401979959,1.82032272387605,2.15585442544872,2.86171393721913,4.8796222750066,6.64953877162039,6.58466431321257,4.59731693698529,9.6152357700222,2.49550802952046,3.58779271377724,6.83383644219416,5.93409323246773,2.10063767259082,6.69841440049853,6.95629458123199,4.46680455195816,4.21940830603166,4.87185025805993,5.80597680761463,8.19244097916464,13.739914829599,2.4850671476163,2.61955455391865,1.3564847384839,0.773043412653187,0.545492241181669,2.58124135850103,0.121973706129595,0.397589304964456,0.348581828608555,0.310983165046111,0,0,3.12899064659632,5.14592750554308,0,3.25057549622385,1.44375896333917,1.8929088006375,2.36018566109342,2.89213235860178,1.21323370005633,1.52515610864684,1.66089433377768,2.29213223872279,0.98110732562673,4.23221872641029,0,0,2.057870056657,4.41026134156626,0,0,0,0,3.68965315629341,2.23038153388083,1.20725313949488,0,0.402115889646523,0.925884451585296,1.3032332212413,3.11980435583874,0,0.695582429850461,9.7449216215732,0,0,0,0,0,0,0,0,0.93733833986777,1.51183915378974,0,1.16426079513703,0.581267877027924,1.91691339582606,0,0,0,0,0,1.07946420296687,0.763976851116555,1.17217447210047,1.71072446022705,1.43958489784653,0,0.857479297891735,2.69114602428866,3.92364061949952,2.2001485746285,2.06834745212444,7.15312891703765,3.381211010224,2.39344304926383,0,1.02882949704857,1.41849132023278,1.0656887160644,5.00422977803516,1.62786481617433,0.823240336780769,1.95441710576241,4.6200953336531,0.791951872933429,3.01439377059586,2.61460037580088,3.89894665610022,0,0,0,1.91699884393266,1.14861935834114,4.27910715122155,0.868687840005475,3.6985738059069,2.32779252211864,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,8.46571292862065,1.50051156317903,5.15403545029498,5.61521326133179,3.21172179834891,3.15404830067869,7.02848489956279,6.62081419400982,2.27407504055985,3.10419213877515,1.99267679560631,2.94990669666725,4.69171518127647,1.17480694477644,1.02943027143257,0,0,0,0,0,0,4.46594054073798,6.44540287809862,3.36792113319688,5.38184426873944,5.11707249066703,3.53878626515936,1.48418066444991,3.23840356985577,3.72879623157567,3.77784917663522,2.07701771673448,3.83494248917865,2.90062679019893,2.40607764363942,0.552485933615378,2.52591785962135,2.36718518408732,3.93373244878272,5.41439535488894,6.54630365387526,7.84349769176855,0,4.96092655796516,0,0,2.15915916102139,1.54227252690289,2.16757150035082,1.50506932156456,4.33289664176565,5.81753206250107,3.80587083027703,0,0,0.256450125116389,0.656029291399411,0.976135183992909,1.33953315142039,3.38807019827871,3.96045599618822,0,2.60024098414608,6.42735719376638,4.25351160485337,2.61882649094895,3.07007349452259,4.27293374702045,6.66005518183296,5.80066775656914,3.66474497889234,3.82837753280971,0.495854746082934,1.92190067365106,8.80527716212631,0.708104465988849,2.32422774648643,7.870308670766,2.0911118104818,3.69640296211307,2.12922412126809,4.34966496037536,3.7064843820784,3.00562262158182,6.69885064847401,3.48017367190598,5.3376454298671,1.02359116524534,3.42351190427136,4.13664222303718,1.56989728039846,7.91438813366585,3.0199073270966,5.06593330086452,2.02182481573316,1.58510321173008,4.63384301862879,1.46290121726877,1.94970791705028,3.16950440270266,5.59649636772742,5.37340641424108,1.13008116620243,3.85955740482287,2.65375590096488,2.6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| ||
|short_description=p3@BICC1 | |||
}} | }} |
Latest revision as of 14:46, 18 September 2015
Short description: | p3@BICC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BICC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -294bp_to_ENST00000373886_5end |
EntrezGene: | BICC1 |
HGNC: | 19351 |
UniProt: | Q9H694 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.00e-23 | 76 |
muscle cell | 6.76e-13 | 55 |
muscle precursor cell | 8.45e-13 | 58 |
myoblast | 8.45e-13 | 58 |
multi-potent skeletal muscle stem cell | 8.45e-13 | 58 |
electrically responsive cell | 7.15e-10 | 61 |
electrically active cell | 7.15e-10 | 61 |
skin fibroblast | 1.71e-09 | 23 |
smooth muscle cell | 2.40e-09 | 43 |
smooth muscle myoblast | 2.40e-09 | 43 |
stromal cell | 6.75e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 7.46e-19 | 160 |
entire embryonic mesenchyme | 7.46e-19 | 160 |
dense mesenchyme tissue | 1.63e-15 | 73 |
somite | 5.35e-15 | 71 |
presomitic mesoderm | 5.35e-15 | 71 |
presumptive segmental plate | 5.35e-15 | 71 |
dermomyotome | 5.35e-15 | 71 |
trunk paraxial mesoderm | 5.35e-15 | 71 |
paraxial mesoderm | 5.53e-15 | 72 |
presumptive paraxial mesoderm | 5.53e-15 | 72 |
epithelial vesicle | 3.21e-14 | 78 |
skeletal muscle tissue | 1.24e-13 | 62 |
striated muscle tissue | 1.24e-13 | 62 |
myotome | 1.24e-13 | 62 |
muscle tissue | 2.75e-13 | 64 |
musculature | 2.75e-13 | 64 |
musculature of body | 2.75e-13 | 64 |
trunk mesenchyme | 5.47e-13 | 122 |
multilaminar epithelium | 1.54e-12 | 83 |
trunk | 4.11e-11 | 199 |
surface structure | 1.61e-09 | 99 |
cell layer | 2.50e-07 | 309 |
tissue | 4.66e-07 | 773 |
epithelium | 6.54e-07 | 306 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.40e-08 | 14 |
female reproductive organ cancer | 9.63e-07 | 27 |
reproductive organ cancer | 9.66e-07 | 29 |