FFCP PHASE1:Hg19::chr11:60719539..60719551,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:60719539..60719551,- to FFCP PHASE1:Hg19::chr11:60719539..60719551,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51296 | |EntrezGene=51296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18068 | |HGNC=18068 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IY34 | |UniProt=Q8IY34 | ||
|association_with_transcript=-282bp_to_ENST00000227880,NM_016582,NR_027391,uc001nqn.2,uc001nqo.2_5end | |||
|cluster_id=chr11:60719539..60719551,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_9_at_SLC15A3_5end | |||
|id=chr11:60719539..60719551,- | |||
|ontology_enrichment_celltype=CL:0000766!5.76e-32!76;CL:0002194!1.07e-27!63;CL:0000576!1.07e-27!63;CL:0000040!1.07e-27!63;CL:0000559!1.07e-27!63;CL:0002009!1.92e-26!65;CL:0000839!6.17e-25!70;CL:0000557!2.12e-24!71;CL:0000738!9.53e-22!140;CL:0002057!5.11e-20!42;CL:0002087!5.29e-20!119;CL:0000860!4.41e-18!45;CL:0000763!7.04e-17!112;CL:0000049!7.04e-17!112;CL:0002031!2.44e-16!124;CL:0000037!1.99e-14!172;CL:0000566!1.99e-14!172;CL:0002032!4.92e-14!165;CL:0000837!4.92e-14!165;CL:0000988!1.01e-12!182;CL:0000094!1.36e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.40e-35;6!CL:0000473;5.84e-24;39!CL:0000234;5.84e-24;39!CL:0000094;1.85e-19;8!CL:0000775;2.47e-19;3!CL:0002619;3.09e-18;3!CL:0000766;7.78e-18;69!CL:0000576;2.55e-15;48!CL:0000081;4.31e-14;11!CL:0000771;1.08e-13;2!CL:0000763;1.75e-13;100!CL:0000738;2.17e-12;136!CL:0000860;4.19e-11;33!CL:0002057;4.19e-11;33!CL:0002393;5.15e-10;6!CL:0002397;5.15e-10;6!CL:0000840;2.92e-09;5!CL:0000226;1.12e-08;3!CL:0000842;1.12e-08;3!CL:0002087;5.37e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.09e-63,72;CL:0002194,9.59e-52,59;CL:0000576,9.59e-52,59;CL:0000040,9.59e-52,59;CL:0000559,9.59e-52,59;CL:0002009,6.42e-50,61;CL:0000839,7.84e-46,66;CL:0000557,4.36e-45,67;CL:0000763,1.46e-40,108;CL:0000049,1.46e-40,108;CL:0000473,3.74e-36,48;CL:0000234,3.74e-36,48;CL:0000738,3.75e-36,136;CL:0000235,2.13e-35,6;CL:0002087,3.70e-29,115;CL:0000037,3.09e-28,168;CL:0000988,1.61e-26,177;CL:0002032,1.74e-25,161;CL:0000837,1.74e-25,161;CL:0002031,3.42e-23,120;CL:0000094,1.82e-19,8;CL:0000775,2.40e-19,3;CL:0002619,3.01e-18,3;CL:0000860,6.46e-18,42;CL:0002057,6.46e-18,42;CL:0000081,4.25e-14,11;CL:0000771,1.08e-13,2;CL:0000134,2.30e-11,354;CL:0002320,4.98e-11,361;CL:0000219,7.63e-10,386;CL:0000840,2.38e-09,5;CL:0001029,2.38e-09,5;CL:0000226,1.24e-08,3;CL:0000842,1.24e-08,3;CL:0000048,2.16e-08,427;CL:0000723,3.44e-08,433;CL:0000034,6.25e-08,441;CL:0002393,8.23e-07,9;CL:0002397,8.23e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.89e-13;42!CL:0000049;5.49e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.78e-27!102;UBERON:0003061!8.78e-27!102;UBERON:0002193!2.31e-25!112;UBERON:0002371!3.42e-20!80;UBERON:0001474!6.76e-18!86;UBERON:0002405!3.63e-17!115;UBERON:0004765!3.36e-15!101;UBERON:0001434!3.36e-15!101;UBERON:0007023!1.31e-12!115;UBERON:0003081!1.08e-09!216;UBERON:0002204!3.33e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.45e-41,98;UBERON:0003061,3.45e-41,98;UBERON:0002371,3.01e-39,76;UBERON:0002193,6.44e-37,108;UBERON:0001474,4.66e-36,82;UBERON:0002405,3.97e-34,93;UBERON:0004765,1.85e-32,90;UBERON:0001434,9.27e-29,100;UBERON:0003081,3.45e-17,203;UBERON:0002204,2.53e-15,167;UBERON:0002384,1.43e-10,371;UBERON:0000926,3.95e-09,315;UBERON:0004120,3.95e-09,315;UBERON:0006603,3.95e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.492603536699674,0.393553906568396,0.393364276848904,0,0,0,0,0,0.0774672005803016,0,0,12.1878989877013,13.2359335330294,6.2933152507597,2.23915474239924,1.6194683300949,3.60605794687861,0.436194716338694,0.377875943688809,0,1.62700325833979,0.411167888021826,0,0.863077176966451,0.512321413058201,0,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0,2.75475503133812,0.962787081228281,1.91801137739712,1.31940520074686,0,0,4.35313857942876,2.26954089876456,1.24564449799115,0.75374599577023,0,0.217188844705117,3.02699751316684,1.47311054395026,0.316462387440884,0,0,0,0.112328631146495,0.450530678524519,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,1.62273696827342,1.91542711029194,3.32394901297163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5424333948851,23.2668158488995,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46217006087397,5.6161023633417,4.45893486866185,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.50677127429638,4.21667878966063,0,0,0,0,0,0,0,0.591092280605782,0,0.128343036279748,0,0,0,0,0,8.98808428736619,5.9832291840805,9.11714129559278,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,2.15714200818617,1.60091336705167,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0.78494864019923,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0.822724546172388,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0.246169610922139,0,0,0.179021174675609,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.217294743844016,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0.992332043623902,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,1.14241563650639,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0.782982875895635,0,0,0.489473409012935,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0.781078098613847,0,0.19024743058172,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0.297046400327086,0,0,1.50374268767766,0.515663103788617,0.499705779624645,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.413731983447581,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.435433495793923,0,0.336760265072938,0.215166616178029,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.492603536699674,0.393553906568396,0.393364276848904,0,0,0,0,0,0.0774672005803016,0,0,12.1878989877013,13.2359335330294,6.2933152507597,2.23915474239924,1.6194683300949,3.60605794687861,0.436194716338694,0.377875943688809,0,1.62700325833979,0.411167888021826,0,0.863077176966451,0.512321413058201,0,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0,2.75475503133812,0.962787081228281,1.91801137739712,1.31940520074686,0,0,4.35313857942876,2.26954089876456,1.24564449799115,0.75374599577023,0,0.217188844705117,3.02699751316684,1.47311054395026,0.316462387440884,0,0,0,0.112328631146495,0.450530678524519,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,1.62273696827342,1.91542711029194,3.32394901297163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5424333948851,23.2668158488995,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46217006087397,5.6161023633417,4.45893486866185,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.50677127429638,4.21667878966063,0,0,0,0,0,0,0,0.591092280605782,0,0.128343036279748,0,0,0,0,0,8.98808428736619,5.9832291840805,9.11714129559278,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,2.15714200818617,1.60091336705167,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0.78494864019923,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0.822724546172388,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0.246169610922139,0,0,0.179021174675609,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.217294743844016,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0.992332043623902,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,1.14241563650639,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0.782982875895635,0,0,0.489473409012935,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0.781078098613847,0,0.19024743058172,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0.297046400327086,0,0,1.50374268767766,0.515663103788617,0.499705779624645,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.413731983447581,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.435433495793923,0,0.336760265072938,0.215166616178029,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.961705476909699 | ||
|short_description=p9@SLC15A3 | |||
}} | }} |
Latest revision as of 14:43, 18 September 2015
Short description: | p9@SLC15A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC15A3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -282bp_to_ENST00000227880, NM_016582, NR_027391, uc001nqn.2, uc001nqo.2_5end |
EntrezGene: | SLC15A3 |
HGNC: | 18068 |
UniProt: | Q8IY34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.45e-41 | 98 |
blood island | 3.45e-41 | 98 |
bone marrow | 3.01e-39 | 76 |
hemolymphoid system | 6.44e-37 | 108 |
bone element | 4.66e-36 | 82 |
immune system | 3.97e-34 | 93 |
skeletal element | 1.85e-32 | 90 |
skeletal system | 9.27e-29 | 100 |
lateral plate mesoderm | 3.45e-17 | 203 |
musculoskeletal system | 2.53e-15 | 167 |
connective tissue | 1.43e-10 | 371 |
mesoderm | 3.95e-09 | 315 |
mesoderm-derived structure | 3.95e-09 | 315 |
presumptive mesoderm | 3.95e-09 | 315 |