FFCP PHASE1:Hg19::chr17:81037473..81037498,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:81037473..81037498,+
|short_description=p1@METRNL
|description=CAGE_peak_1_at_METRNL_5end
|association_with_transcript=-68bp_to_ENST00000320095,NM_0010044...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284207 | |EntrezGene=284207 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27584 | |HGNC=27584 | ||
|TSSclassifier=strong | |||
|UniProt=Q641Q3 | |UniProt=Q641Q3 | ||
|association_with_transcript=-68bp_to_ENST00000320095,NM_001004431,uc002kgh.2_5end | |||
|cluster_id=chr17:81037473..81037498,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_METRNL_5end | |||
|id=chr17:81037473..81037498,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.60e-29!76;CL:0000557!2.26e-26!71;CL:0002057!4.34e-25!42;CL:0002009!4.32e-24!65;CL:0002194!3.56e-23!63;CL:0000576!3.56e-23!63;CL:0000040!3.56e-23!63;CL:0000559!3.56e-23!63;CL:0000860!1.18e-22!45;CL:0000839!1.57e-22!70;CL:0000048!1.08e-20!430;CL:0000723!2.01e-18!436;CL:0000034!6.11e-18!444;CL:0002320!3.27e-17!365;CL:0000134!2.68e-15!358;CL:0000219!7.29e-12!390;CL:0000763!1.55e-11!112;CL:0000049!1.55e-11!112;CL:0002371!6.66e-10!591;CL:0000055!1.97e-09!180;CL:0000144!1.53e-08!625;CL:0000057!7.18e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-18;33!CL:0002057;1.04e-18;33!CL:0000473;2.95e-17;39!CL:0000234;2.95e-17;39!CL:0000576;2.78e-14;48!CL:0000766;1.07e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.76e-30,72;CL:0000557,1.19e-27,67;CL:0000473,6.31e-27,48;CL:0000234,6.31e-27,48;CL:0002009,2.26e-25,61;CL:0000860,4.27e-25,42;CL:0002057,4.27e-25,42;CL:0002194,1.89e-24,59;CL:0000576,1.89e-24,59;CL:0000040,1.89e-24,59;CL:0000559,1.89e-24,59;CL:0000839,1.39e-23,66;CL:0000048,9.77e-22,427;CL:0000723,2.29e-19,433;CL:0000034,7.28e-19,441;CL:0002320,7.24e-18,361;CL:0000134,6.49e-16,354;CL:0000219,2.19e-12,386;CL:0000763,7.48e-12,108;CL:0000049,7.48e-12,108;CL:0000057,3.31e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.42e-29!167;UBERON:0002371!8.17e-27!80;UBERON:0001474!7.09e-25!86;UBERON:0003081!5.72e-24!216;UBERON:0004765!1.33e-23!101;UBERON:0001434!1.33e-23!101;UBERON:0002390!5.93e-21!102;UBERON:0003061!5.93e-21!102;UBERON:0002193!2.80e-19!112;UBERON:0002384!1.19e-17!375;UBERON:0000926!3.65e-17!448;UBERON:0004120!3.65e-17!448;UBERON:0006603!3.65e-17!448;UBERON:0002405!3.94e-15!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.33e-31,167;UBERON:0000926,3.51e-30,315;UBERON:0004120,3.51e-30,315;UBERON:0006603,3.51e-30,315;UBERON:0002371,5.49e-28,76;UBERON:0003081,1.00e-27,203;UBERON:0001474,7.99e-26,82;UBERON:0001434,4.52e-25,100;UBERON:0004765,2.42e-24,90;UBERON:0002405,1.10e-21,93;UBERON:0002390,1.16e-21,98;UBERON:0003061,1.16e-21,98;UBERON:0002193,7.33e-20,108;UBERON:0002384,2.68e-18,371;UBERON:0000479,4.40e-07,773 | |||
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| ||
|short_description=p1@METRNL | |||
}} | }} |
Latest revision as of 14:40, 18 September 2015
Short description: | p1@METRNL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_METRNL_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -68bp_to_ENST00000320095, NM_001004431, uc002kgh.2_5end |
EntrezGene: | METRNL |
HGNC: | 27584 |
UniProt: | Q641Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.76e-30 | 72 |
granulocyte monocyte progenitor cell | 1.19e-27 | 67 |
defensive cell | 6.31e-27 | 48 |
phagocyte | 6.31e-27 | 48 |
macrophage dendritic cell progenitor | 2.26e-25 | 61 |
classical monocyte | 4.27e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.27e-25 | 42 |
monopoietic cell | 1.89e-24 | 59 |
monocyte | 1.89e-24 | 59 |
monoblast | 1.89e-24 | 59 |
promonocyte | 1.89e-24 | 59 |
myeloid lineage restricted progenitor cell | 1.39e-23 | 66 |
multi fate stem cell | 9.77e-22 | 427 |
somatic stem cell | 2.29e-19 | 433 |
stem cell | 7.28e-19 | 441 |
connective tissue cell | 7.24e-18 | 361 |
mesenchymal cell | 6.49e-16 | 354 |
motile cell | 2.19e-12 | 386 |
myeloid cell | 7.48e-12 | 108 |
common myeloid progenitor | 7.48e-12 | 108 |
fibroblast | 3.31e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.33e-31 | 167 |
mesoderm | 3.51e-30 | 315 |
mesoderm-derived structure | 3.51e-30 | 315 |
presumptive mesoderm | 3.51e-30 | 315 |
bone marrow | 5.49e-28 | 76 |
lateral plate mesoderm | 1.00e-27 | 203 |
bone element | 7.99e-26 | 82 |
skeletal system | 4.52e-25 | 100 |
skeletal element | 2.42e-24 | 90 |
immune system | 1.10e-21 | 93 |
hematopoietic system | 1.16e-21 | 98 |
blood island | 1.16e-21 | 98 |
hemolymphoid system | 7.33e-20 | 108 |
connective tissue | 2.68e-18 | 371 |
tissue | 4.40e-07 | 773 |