FFCP PHASE1:Hg19::chr3:48601207..48601222,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90226 | |EntrezGene=90226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18414 | |HGNC=18414 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RP3 | |UniProt=Q96RP3 | ||
|association_with_transcript=-1bp_to_ENST00000273610_5end | |association_with_transcript=-1bp_to_ENST00000273610_5end | ||
|cluster_id=chr3:48601207..48601222,- | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_1_at_UCN2_5end | |description=CAGE_peak_1_at_UCN2_5end | ||
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|ontology_enrichment_celltype=CL:0002057!5.09e-24!42;CL:0000860!1.13e-21!45;CL:0000839!1.62e-18!70;CL:0000557!4.45e-18!71;CL:0000766!4.58e-16!76;CL:0002194!2.23e-15!63;CL:0000576!2.23e-15!63;CL:0000040!2.23e-15!63;CL:0000559!2.23e-15!63;CL:0002009!1.42e-14!65;CL:0000763!5.07e-12!112;CL:0000049!5.07e-12!112;CL:0000219!1.04e-08!390;CL:0002031!2.77e-08!124;CL:0000148!2.81e-07!10;CL:0000541!2.81e-07!10;CL:0002274!5.22e-07!5;CL:0000457!5.22e-07!5;CL:0002191!5.22e-07!5;CL:0000097!5.22e-07!5;CL:0000831!5.22e-07!5;CL:0002028!5.22e-07!5;CL:0002371!5.29e-07!591 | |ontology_enrichment_celltype=CL:0002057!5.09e-24!42;CL:0000860!1.13e-21!45;CL:0000839!1.62e-18!70;CL:0000557!4.45e-18!71;CL:0000766!4.58e-16!76;CL:0002194!2.23e-15!63;CL:0000576!2.23e-15!63;CL:0000040!2.23e-15!63;CL:0000559!2.23e-15!63;CL:0002009!1.42e-14!65;CL:0000763!5.07e-12!112;CL:0000049!5.07e-12!112;CL:0000219!1.04e-08!390;CL:0002031!2.77e-08!124;CL:0000148!2.81e-07!10;CL:0000541!2.81e-07!10;CL:0002274!5.22e-07!5;CL:0000457!5.22e-07!5;CL:0002191!5.22e-07!5;CL:0000097!5.22e-07!5;CL:0000831!5.22e-07!5;CL:0002028!5.22e-07!5;CL:0002371!5.29e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.29e-66;33!CL:0002057;2.29e-66;33!CL:0000473;3.48e-46;39!CL:0000234;3.48e-46;39!CL:0000576;2.24e-30;48!CL:0000766;2.66e-21;69!CL:0000148;2.13e-16;10!CL:0000763;5.99e-12;100!CL:0002567;1.99e-11;3!CL:0000147;2.27e-11;14!CL:0000097;4.24e-10;5!CL:0000710;1.08e-09;20!CL:0002087;2.53e-08;104!CL:0000163;3.07e-08;9!CL:0000738;4.58e-07;136!CL:0000075;8.40e-07;27 | |ontology_enrichment_celltype_v019=CL:0000860;2.29e-66;33!CL:0002057;2.29e-66;33!CL:0000473;3.48e-46;39!CL:0000234;3.48e-46;39!CL:0000576;2.24e-30;48!CL:0000766;2.66e-21;69!CL:0000148;2.13e-16;10!CL:0000763;5.99e-12;100!CL:0002567;1.99e-11;3!CL:0000147;2.27e-11;14!CL:0000097;4.24e-10;5!CL:0000710;1.08e-09;20!CL:0002087;2.53e-08;104!CL:0000163;3.07e-08;9!CL:0000738;4.58e-07;136!CL:0000075;8.40e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.12e-56,42;CL:0002057,4.12e-56,42;CL:0000473,4.22e-48,48;CL:0000234,4.22e-48,48;CL:0000839,5.77e-46,66;CL:0000557,3.73e-45,67;CL:0000766,1.94e-41,72;CL:0002194,5.88e-40,59;CL:0000576,5.88e-40,59;CL:0000040,5.88e-40,59;CL:0000559,5.88e-40,59;CL:0002009,2.10e-38,61;CL:0000763,2.04e-30,108;CL:0000049,2.04e-30,108;CL:0002031,1.08e-24,120;CL:0000738,9.97e-21,136;CL:0002032,6.18e-20,161;CL:0000837,6.18e-20,161;CL:0002087,9.55e-20,115;CL:0000037,1.05e-18,168;CL:0000988,2.89e-17,177;CL:0000148,2.18e-16,10;CL:0000541,2.18e-16,10;CL:0000219,2.22e-12,386;CL:0002567,1.99e-11,3;CL:0000147,2.31e-11,14;CL:0000097,4.97e-10,5;CL:0002028,4.97e-10,5;CL:0000710,1.05e-09,20;CL:0002320,3.07e-09,361;CL:0000134,5.26e-09,354;CL:0000163,3.52e-08,9;CL:0000075,8.22e-07,27 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-41;42!CL:0000049;4.30e-09;108 | |ontology_enrichment_development_v019=CL:0002057;2.20e-41;42!CL:0000049;4.30e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;5.18e-08;2 | |ontology_enrichment_disease_v019=DOID:1909;5.18e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,5.09e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.71e-18!80;UBERON:0001474!9.31e-17!86;UBERON:0004765!2.25e-15!101;UBERON:0001434!2.25e-15!101;UBERON:0002405!8.78e-13!115;UBERON:0002390!3.73e-12!102;UBERON:0003061!3.73e-12!102;UBERON:0002193!5.72e-10!112;UBERON:0002204!1.89e-08!167;UBERON:0002384!2.61e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!4.71e-18!80;UBERON:0001474!9.31e-17!86;UBERON:0004765!2.25e-15!101;UBERON:0001434!2.25e-15!101;UBERON:0002405!8.78e-13!115;UBERON:0002390!3.73e-12!102;UBERON:0003061!3.73e-12!102;UBERON:0002193!5.72e-10!112;UBERON:0002204!1.89e-08!167;UBERON:0002384!2.61e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.01e-46,76;UBERON:0001474,1.23e-42,82;UBERON:0004765,2.81e-40,90;UBERON:0002405,1.64e-36,93;UBERON:0001434,2.61e-35,100;UBERON:0002390,3.54e-34,98;UBERON:0003061,3.54e-34,98;UBERON:0002193,3.71e-30,108;UBERON:0002204,1.21e-18,167;UBERON:0003081,1.33e-13,203;UBERON:0002384,1.08e-08,371;UBERON:0000926,7.41e-08,315;UBERON:0004120,7.41e-08,315;UBERON:0006603,7.41e-08,315 | |||
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| ||
|short_description=p1@UCN2 | |short_description=p1@UCN2 | ||
}} | }} |
Latest revision as of 14:36, 18 September 2015
Short description: | p1@UCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UCN2_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -1bp_to_ENST00000273610_5end |
EntrezGene: | UCN2 |
HGNC: | 18414 |
UniProt: | Q96RP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.01e-46 | 76 |
bone element | 1.23e-42 | 82 |
skeletal element | 2.81e-40 | 90 |
immune system | 1.64e-36 | 93 |
skeletal system | 2.61e-35 | 100 |
hematopoietic system | 3.54e-34 | 98 |
blood island | 3.54e-34 | 98 |
hemolymphoid system | 3.71e-30 | 108 |
musculoskeletal system | 1.21e-18 | 167 |
lateral plate mesoderm | 1.33e-13 | 203 |
connective tissue | 1.08e-08 | 371 |
mesoderm | 7.41e-08 | 315 |
mesoderm-derived structure | 7.41e-08 | 315 |
presumptive mesoderm | 7.41e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.09e-08 | 2 |