FFCP PHASE1:Hg19::chr21:43823965..43823976,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53347 | |EntrezGene=53347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12462 | |HGNC=12462 | ||
|TSSclassifier=strong | |||
|UniProt=P57075 | |UniProt=P57075 | ||
|association_with_transcript=0bp_to_NM_001001895,NM_001243467,NM_018961_5end | |association_with_transcript=0bp_to_NM_001001895,NM_001243467,NM_018961_5end | ||
|cluster_id=chr21:43823965..43823976,+ | |||
|coexpression_cluster_id=C2634 | |||
|description=CAGE_peak_2_at_UBASH3A_5end | |description=CAGE_peak_2_at_UBASH3A_5end | ||
|id=chr21:43823965..43823976,+ | |id=chr21:43823965..43823976,+ | ||
|ontology_enrichment_celltype=CL:0000084!1.46e-30!25;CL:0000827!1.46e-30!25;CL:0000791!3.04e-28!18;CL:0000789!3.04e-28!18;CL:0002420!3.04e-28!18;CL:0002419!3.04e-28!18;CL:0000790!3.04e-28!18;CL:0000625!1.82e-18!11;CL:0000838!2.14e-17!52;CL:0000542!6.16e-17!53;CL:0000051!6.16e-17!53;CL:0000624!1.89e-13!6;CL:0000037!4.85e-13!172;CL:0000566!4.85e-13!172;CL:0000988!1.12e-11!182;CL:0002032!9.41e-11!165;CL:0000837!9.41e-11!165;CL:0000738!1.34e-08!140;CL:0000898!6.06e-08!3;CL:0002087!1.05e-07!119;CL:0000842!5.34e-07!3 | |ontology_enrichment_celltype=CL:0000084!1.46e-30!25;CL:0000827!1.46e-30!25;CL:0000791!3.04e-28!18;CL:0000789!3.04e-28!18;CL:0002420!3.04e-28!18;CL:0002419!3.04e-28!18;CL:0000790!3.04e-28!18;CL:0000625!1.82e-18!11;CL:0000838!2.14e-17!52;CL:0000542!6.16e-17!53;CL:0000051!6.16e-17!53;CL:0000624!1.89e-13!6;CL:0000037!4.85e-13!172;CL:0000566!4.85e-13!172;CL:0000988!1.12e-11!182;CL:0002032!9.41e-11!165;CL:0000837!9.41e-11!165;CL:0000738!1.34e-08!140;CL:0000898!6.06e-08!3;CL:0002087!1.05e-07!119;CL:0000842!5.34e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.55e-35;18!CL:0000789;2.55e-35;18!CL:0002419;2.55e-35;18!CL:0000084;5.25e-34;25!CL:0000624;4.77e-20;6!CL:0000625;6.47e-20;11!CL:0000898;1.26e-15;3!CL:0000815;4.83e-11;2!CL:0000792;4.83e-11;2!CL:0002677;4.83e-11;2!CL:0000542;3.05e-09;53!CL:0000226;4.26e-07;3!CL:0000842;4.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.97e-35,18;CL:0000789,1.97e-35,18;CL:0002420,1.97e-35,18;CL:0002419,1.97e-35,18;CL:0000790,1.97e-35,18;CL:0000084,5.50e-34,25;CL:0000827,5.50e-34,25;CL:0000625,4.76e-20,11;CL:0000624,5.19e-20,6;CL:0000838,4.27e-17,52;CL:0000542,1.04e-16,53;CL:0000051,1.04e-16,53;CL:0000898,1.09e-15,3;CL:0000815,3.87e-11,2;CL:0000792,3.87e-11,2;CL:0002677,3.87e-11,2;CL:0000037,1.06e-10,168;CL:0000988,6.80e-10,177;CL:0002032,3.12e-09,161;CL:0000837,3.12e-09,161;CL:0002087,6.57e-08,115;CL:0000738,4.29e-07,136;CL:0000226,7.45e-07,3;CL:0000842,7.45e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.55e-35;18!CL:0000051;3.05e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!1.31e-07!51;DOID:0060083!1.31e-07!51;DOID:1240!2.42e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.02e-15!15;UBERON:0000179!5.02e-15!15;UBERON:0000463!5.02e-15!15;UBERON:0007023!3.91e-10!115;UBERON:0004177!2.35e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.01e-07;15!UBERON:0000179;1.01e-07;15!UBERON:0000463;1.01e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.18e-07,15;UBERON:0000179,1.18e-07,15;UBERON:0000463,1.18e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91914699048606,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,1.180258620683,0.786021525498329,1.43921049299656,2.50779743086017,2.93330039970231,0.473447805734733,1.94826728407911,8.35578426638802,3.53527088969805,2.65840673500345,2.97884250141517,4.22701355094728,7.02320476823343,5.59088875652499,6.63240042686036,5.79606171470105,1.63115219478266,1.33770414044857,0,5.32553910678561,2.29932296161153,0.68725489096526,2.27717722817553,1.27426165729639,1.30216690771284,0.950452044448374,1.95747654801105,2.68771883424279,1.24930726552346,0.710331756132051,0,0.80642697289893,1.33720097891754,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44024217006613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,0.822724546172388,1.94541993357815,0.540031437238115,2.37937552888281,0,0,0,0,0,0.924843963529383,2.07254154547469,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,7.79537286906679,1.23087398947712,0.811367035427949,0.33307196799782,21.1480507631774,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66211681900156,0,0.392125068635479,0.167821586975843,2.08729105996604,2.06617552674492,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0,0.657887425858975,0.322289439867886,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0.775066918032073,1.11734485732544,0,0.0636471582781649,0,0.435433495793923,0,0.673520530145875,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 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| ||
|short_description=p2@UBASH3A | |short_description=p2@UBASH3A | ||
}} | }} |
Latest revision as of 14:20, 18 September 2015
Short description: | p2@UBASH3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBASH3A_5end |
Coexpression cluster: | C2634_acute_CD4_thymus_CD8_Whole_Peripheral_chronic |
Association with transcript: | 0bp_to_NM_001001895, NM_001243467, NM_018961_5end |
EntrezGene: | UBASH3A |
HGNC: | 12462 |
UniProt: | P57075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.97e-35 | 18 |
alpha-beta T cell | 1.97e-35 | 18 |
immature T cell | 1.97e-35 | 18 |
mature T cell | 1.97e-35 | 18 |
immature alpha-beta T cell | 1.97e-35 | 18 |
T cell | 5.50e-34 | 25 |
pro-T cell | 5.50e-34 | 25 |
CD8-positive, alpha-beta T cell | 4.76e-20 | 11 |
CD4-positive, alpha-beta T cell | 5.19e-20 | 6 |
lymphoid lineage restricted progenitor cell | 4.27e-17 | 52 |
lymphocyte | 1.04e-16 | 53 |
common lymphoid progenitor | 1.04e-16 | 53 |
naive T cell | 1.09e-15 | 3 |
regulatory T cell | 3.87e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.87e-11 | 2 |
naive regulatory T cell | 3.87e-11 | 2 |
hematopoietic stem cell | 1.06e-10 | 168 |
hematopoietic cell | 6.80e-10 | 177 |
hematopoietic oligopotent progenitor cell | 3.12e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.12e-09 | 161 |
nongranular leukocyte | 6.57e-08 | 115 |
leukocyte | 4.29e-07 | 136 |
single nucleate cell | 7.45e-07 | 3 |
mononuclear cell | 7.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.18e-07 | 15 |
haemolymphatic fluid | 1.18e-07 | 15 |
organism substance | 1.18e-07 | 15 |