FFCP PHASE1:Hg19::chr1:170633100..170633112,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:170633100..170633112,+
|short_description=p19@PRRX1
|description=CAGE_peak_19_at_PRRX1_5end
|association_with_transcript=22bp_to_ENST00000497230_5end
|Ent...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=G3V2N3 | |UniProt=G3V2N3 | ||
|association_with_transcript=22bp_to_ENST00000497230_5end | |||
|cluster_id=chr1:170633100..170633112,+ | |||
|description=CAGE_peak_19_at_PRRX1_5end | |||
|id=chr1:170633100..170633112,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.10e-28!180;CL:0000057!1.40e-17!75;CL:0000680!6.42e-13!57;CL:0000056!6.42e-13!57;CL:0000355!6.42e-13!57;CL:0000187!1.68e-11!54;CL:0000183!1.58e-09!59;CL:0002334!2.84e-09!12;CL:0000393!3.53e-09!60;CL:0000211!3.53e-09!60;CL:0002620!1.01e-08!23;CL:0000359!1.30e-08!32;CL:0000192!8.46e-08!42;CL:0000514!8.46e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.94e-18;12!CL:0000057;1.10e-07;73!CL:0002579;5.02e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.01e-17,12;CL:0000057,3.31e-17,76;CL:0002579,7.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.98e-20!83;UBERON:0002329!1.98e-20!83;UBERON:0003077!1.98e-20!83;UBERON:0003059!1.98e-20!83;UBERON:0007282!1.98e-20!83;UBERON:0009618!1.98e-20!83;UBERON:0007285!1.98e-20!83;UBERON:0004290!1.43e-18!70;UBERON:0000486!1.04e-15!82;UBERON:0001134!1.61e-15!61;UBERON:0002036!1.61e-15!61;UBERON:0003082!1.61e-15!61;UBERON:0002385!2.19e-15!63;UBERON:0001015!2.19e-15!63;UBERON:0000383!2.19e-15!63;UBERON:0000475!1.67e-10!365;UBERON:0007100!5.50e-10!27;UBERON:0005256!1.33e-09!143;UBERON:0003102!1.55e-09!95;UBERON:0007023!1.28e-08!115;UBERON:0000948!2.27e-08!24;UBERON:0005498!2.27e-08!24;UBERON:0004140!2.27e-08!24;UBERON:0009881!2.27e-08!24;UBERON:0004141!2.27e-08!24;UBERON:0003084!2.27e-08!24;UBERON:0007005!2.27e-08!24;UBERON:0004139!2.27e-08!24;UBERON:0004291!2.27e-08!24;UBERON:0004872!2.91e-08!84;UBERON:0002100!1.74e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,5.22e-08,73;UBERON:0002329,1.88e-07,71;UBERON:0003059,1.88e-07,71;UBERON:0007282,1.88e-07,71;UBERON:0004290,1.88e-07,71;UBERON:0009618,1.88e-07,71;UBERON:0003077,2.83e-07,72;UBERON:0007285,2.83e-07,72;UBERON:0004797,5.26e-07,7 | |||
|phase1_expression=1.63510541343501,0.428201047781966,1.12763523276777,0,0,0.872338524100369,0,1.89515962028049,0.783556884599516,0,0,0,0,0.618831764800233,0,3.36162573225888,1.20538905604795,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,2.53007406669196,0.50133791063589,1.44846518960824,1.5905718941022,0.973269740605272,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,3.29239330327907,2.64818361626438,0.286836620748814,2.4826786753885,0.560677600142307,1.06748995729705,0.24666754841716,0.933633106199299,0,0,0,0,0,4.05808099879417,3.4228309292667,3.73621701379503,0.587172493218824,0.647491777472526,0.421352420106746,1.22492502752936,0.859840221182376,0.309977343527296,0,1.23633464639278,0,0,1.0100166837244,0.500474079487857,2.21651292387346,0.438977620880838,1.5324389789951,2.25357088359895,0.794025282120147,0.179389635688862,0.85422955527427,0.211931901159562,0,0.206105058476878,0.257640540045629,1.48893485065272,2.53164498361899,1.75386609290158,0,0.644349290496095,3.07127507955743,0,0.604512589365842,0.847802961552438,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.95339771567235,0.904902010304444,0,0,0,1.04007436911366,0.257207374262142,0,0.799266537048298,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,5.70547620162874,1.01346914667305,0.61642896765115,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,2.9115920614313,2.14114786556594,0.946214490203608,1.28855556491985,0.902838299183157,2.27407504055985,0,1.32845119707087,0.921845842708516,1.47702144595741,0,0,0,0,0,0,0,0,2.72918588600655,3.06923946576125,1.12264037773229,2.05022638809122,4.09365799253363,2.2519548960105,0,1.54209693802656,2.30830242907065,2.95657761649713,3.63478100428535,1.04589340613963,0,0,0,0.34444334449382,0.728364672026868,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,1.83674364755032,0.308097234229289,0.15350367472613,0.275673144969061,0.429680979473094,0.145016693914229,0.170453254832202,0.979352392114111,0,0,0,0,0,0.62962469366128,0,0.616067160352178,3.72614221221915,1.73986598415015,1.66791797193528,0.572499546967965,0.744316738719335,0.949138274156178,0.38126038784765,0,0.855877976067841,1.59101623962968,0,0.179872457583315,0,0.235624804691373,3.841467149893,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,4.52032466480971,0,0,0.876901770507525,0,0,0.811641507850816,0.30982349809975,0.563391205064483,0.286822704408103,0.196498082026242,0.35667105148125,1.06428319221179,2.9555068941673,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.552567831062295,0,0,0.615424027305347,6.22079175323615,0,0,0,0.690503839458535,0,6.66821940867821,0.969332746095218,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0,6.38687145581516,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0.067401132980677,1.60515529459758,0.234264445725339,0,0,0,1.57833761139756,0,0,1.51647791108371,0,0,0,0,0,0,0,1.10939738410511,0,0,0,1.39781334593624,0.171986032471617,0,0,0,0.581934098930517,0,1.12990370390266,0,0.397429223405979,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.815425236441684,0.209205692624666,0,0,0.600420288709789,0,0,0,0,3.0721064139948,1.14580212005842,0.717873024576814,0.199679000498991,1.28767814440971,4.46342914883745,0.873385142327441,1.80149941771202,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,0,0,2.85878130549347,1.32418394073086,1.77987976358325,1.62899880526114,0.864221491201268,0.979762080328227,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0.554805861502613,0.568209015825267,0,3.55924488638614,0.228840068396924,0.907385542579434,0.466311601748341,0.73927574994817,0.318593534327405,0,0,1.24411862352257,0,0.521745061811734,0,0,0,0.727394636810238,0.107410557042488,0.464033759878494,0,0,2.06037423109676,3.70424437642511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,2.57748330352577,0,0,0,0.107824811396682,0,0,0,0,0,0,3.18004350653419,0,0,3.17408349321616,0,0.128458450192919,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.795664888465099,3.76051641746286,0,0,0,0,0,0.202612753855184,0,0,0,0,0,5.95453414067153,0.351742488719241,0,1.60710550763486,0,0.606965604236632,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,1.0989032999072,0,0,0,0,0,1.21510125100316,0,0,0.521574816907738,1.60342272946051,0,0,0.691259661814092,0,1.30165200803622,1.19298766662821,3.81048345171836,0,0,0,0,0,0,3.88457302312737,4.00384946739363,1.1598144313382,0,0,0,0,0.11294608203896,0,0,0,0,0,0.490296643507811,0,0,0.297046400327086,0.4226557275834,2.37897960562944,0,0,0.0999411559249289,0,0,0,0,0.458729283404541,0.143339583151451,0.473314686579554,0.0679914901909147,0,0,3.34795516350076,0.924351257262837,4.75889218336168,0,0,0,0,0,0,0,0.909344378618873,0.267964130156178,0,0,2.13233981900981,0.714193294391221,0.0645889098360061,0,0,0.445530107947154,0.606351566874658,1.74173398317569,1.02669990325584,0.404112318087525,0.573777643141411,2.32862249582209,0,0,1.9307228228694,0,0,1.95586310692586,4.06896178315738,0,1.81146414231924,0 | |phase1_expression=1.63510541343501,0.428201047781966,1.12763523276777,0,0,0.872338524100369,0,1.89515962028049,0.783556884599516,0,0,0,0,0.618831764800233,0,3.36162573225888,1.20538905604795,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,2.53007406669196,0.50133791063589,1.44846518960824,1.5905718941022,0.973269740605272,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,3.29239330327907,2.64818361626438,0.286836620748814,2.4826786753885,0.560677600142307,1.06748995729705,0.24666754841716,0.933633106199299,0,0,0,0,0,4.05808099879417,3.4228309292667,3.73621701379503,0.587172493218824,0.647491777472526,0.421352420106746,1.22492502752936,0.859840221182376,0.309977343527296,0,1.23633464639278,0,0,1.0100166837244,0.500474079487857,2.21651292387346,0.438977620880838,1.5324389789951,2.25357088359895,0.794025282120147,0.179389635688862,0.85422955527427,0.211931901159562,0,0.206105058476878,0.257640540045629,1.48893485065272,2.53164498361899,1.75386609290158,0,0.644349290496095,3.07127507955743,0,0.604512589365842,0.847802961552438,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.95339771567235,0.904902010304444,0,0,0,1.04007436911366,0.257207374262142,0,0.799266537048298,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,5.70547620162874,1.01346914667305,0.61642896765115,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,2.9115920614313,2.14114786556594,0.946214490203608,1.28855556491985,0.902838299183157,2.27407504055985,0,1.32845119707087,0.921845842708516,1.47702144595741,0,0,0,0,0,0,0,0,2.72918588600655,3.06923946576125,1.12264037773229,2.05022638809122,4.09365799253363,2.2519548960105,0,1.54209693802656,2.30830242907065,2.95657761649713,3.63478100428535,1.04589340613963,0,0,0,0.34444334449382,0.728364672026868,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,1.83674364755032,0.308097234229289,0.15350367472613,0.275673144969061,0.429680979473094,0.145016693914229,0.170453254832202,0.979352392114111,0,0,0,0,0,0.62962469366128,0,0.616067160352178,3.72614221221915,1.73986598415015,1.66791797193528,0.572499546967965,0.744316738719335,0.949138274156178,0.38126038784765,0,0.855877976067841,1.59101623962968,0,0.179872457583315,0,0.235624804691373,3.841467149893,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,4.52032466480971,0,0,0.876901770507525,0,0,0.811641507850816,0.30982349809975,0.563391205064483,0.286822704408103,0.196498082026242,0.35667105148125,1.06428319221179,2.9555068941673,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.552567831062295,0,0,0.615424027305347,6.22079175323615,0,0,0,0.690503839458535,0,6.66821940867821,0.969332746095218,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0,6.38687145581516,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0.067401132980677,1.60515529459758,0.234264445725339,0,0,0,1.57833761139756,0,0,1.51647791108371,0,0,0,0,0,0,0,1.10939738410511,0,0,0,1.39781334593624,0.171986032471617,0,0,0,0.581934098930517,0,1.12990370390266,0,0.397429223405979,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.815425236441684,0.209205692624666,0,0,0.600420288709789,0,0,0,0,3.0721064139948,1.14580212005842,0.717873024576814,0.199679000498991,1.28767814440971,4.46342914883745,0.873385142327441,1.80149941771202,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,0,0,2.85878130549347,1.32418394073086,1.77987976358325,1.62899880526114,0.864221491201268,0.979762080328227,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0.554805861502613,0.568209015825267,0,3.55924488638614,0.228840068396924,0.907385542579434,0.466311601748341,0.73927574994817,0.318593534327405,0,0,1.24411862352257,0,0.521745061811734,0,0,0,0.727394636810238,0.107410557042488,0.464033759878494,0,0,2.06037423109676,3.70424437642511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,2.57748330352577,0,0,0,0.107824811396682,0,0,0,0,0,0,3.18004350653419,0,0,3.17408349321616,0,0.128458450192919,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.795664888465099,3.76051641746286,0,0,0,0,0,0.202612753855184,0,0,0,0,0,5.95453414067153,0.351742488719241,0,1.60710550763486,0,0.606965604236632,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,1.0989032999072,0,0,0,0,0,1.21510125100316,0,0,0.521574816907738,1.60342272946051,0,0,0.691259661814092,0,1.30165200803622,1.19298766662821,3.81048345171836,0,0,0,0,0,0,3.88457302312737,4.00384946739363,1.1598144313382,0,0,0,0,0.11294608203896,0,0,0,0,0,0.490296643507811,0,0,0.297046400327086,0.4226557275834,2.37897960562944,0,0,0.0999411559249289,0,0,0,0,0.458729283404541,0.143339583151451,0.473314686579554,0.0679914901909147,0,0,3.34795516350076,0.924351257262837,4.75889218336168,0,0,0,0,0,0,0,0.909344378618873,0.267964130156178,0,0,2.13233981900981,0.714193294391221,0.0645889098360061,0,0,0.445530107947154,0.606351566874658,1.74173398317569,1.02669990325584,0.404112318087525,0.573777643141411,2.32862249582209,0,0,1.9307228228694,0,0,1.95586310692586,4.06896178315738,0,1.81146414231924,0 | ||
|short_description=p19@PRRX1 | |||
}} | }} |
Latest revision as of 14:20, 18 September 2015
Short description: | p19@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PRRX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000497230_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | G3V2N3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.01e-17 | 12 |
fibroblast | 3.31e-17 | 76 |
omentum preadipocyte | 7.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 5.22e-08 | 73 |
somite | 1.88e-07 | 71 |
presomitic mesoderm | 1.88e-07 | 71 |
presumptive segmental plate | 1.88e-07 | 71 |
dermomyotome | 1.88e-07 | 71 |
trunk paraxial mesoderm | 1.88e-07 | 71 |
paraxial mesoderm | 2.83e-07 | 72 |
presumptive paraxial mesoderm | 2.83e-07 | 72 |
blood vessel layer | 5.26e-07 | 7 |