FFCP PHASE1:Hg19::chr10:60027642..60027705,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253430 | |EntrezGene=253430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20739 | |HGNC=20739 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFU5 | |UniProt=Q8NFU5 | ||
|association_with_transcript=0bp_to_ENST00000373935,NM_152230,uc001jkb.2_5end | |association_with_transcript=0bp_to_ENST00000373935,NM_152230,uc001jkb.2_5end | ||
|cluster_id=chr10:60027642..60027705,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_IPMK_5end | |description=CAGE_peak_1_at_IPMK_5end | ||
|id=chr10:60027642..60027705,- | |id=chr10:60027642..60027705,- | ||
|ontology_enrichment_celltype=CL:0000738!3.33e-44!140;CL:0002087!1.89e-36!119;CL:0000037!4.13e-36!172;CL:0000566!4.13e-36!172;CL:0002031!1.54e-35!124;CL:0000766!7.57e-34!76;CL:0002032!2.08e-33!165;CL:0000837!2.08e-33!165;CL:0000988!2.86e-32!182;CL:0000557!1.86e-30!71;CL:0002009!2.30e-28!65;CL:0002194!4.08e-27!63;CL:0000576!4.08e-27!63;CL:0000040!4.08e-27!63;CL:0000559!4.08e-27!63;CL:0002057!1.15e-26!42;CL:0000860!2.18e-26!45;CL:0000839!4.16e-26!70;CL:0000763!2.00e-23!112;CL:0000049!2.00e-23!112;CL:0000542!3.41e-09!53;CL:0000051!3.41e-09!53;CL:0000838!4.38e-09!52;CL:0002393!3.79e-07!9;CL:0002397!3.79e-07!9 | |ontology_enrichment_celltype=CL:0000738!3.33e-44!140;CL:0002087!1.89e-36!119;CL:0000037!4.13e-36!172;CL:0000566!4.13e-36!172;CL:0002031!1.54e-35!124;CL:0000766!7.57e-34!76;CL:0002032!2.08e-33!165;CL:0000837!2.08e-33!165;CL:0000988!2.86e-32!182;CL:0000557!1.86e-30!71;CL:0002009!2.30e-28!65;CL:0002194!4.08e-27!63;CL:0000576!4.08e-27!63;CL:0000040!4.08e-27!63;CL:0000559!4.08e-27!63;CL:0002057!1.15e-26!42;CL:0000860!2.18e-26!45;CL:0000839!4.16e-26!70;CL:0000763!2.00e-23!112;CL:0000049!2.00e-23!112;CL:0000542!3.41e-09!53;CL:0000051!3.41e-09!53;CL:0000838!4.38e-09!52;CL:0002393!3.79e-07!9;CL:0002397!3.79e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.12e-19;33!CL:0002057;3.12e-19;33!CL:0000576;7.88e-18;48!CL:0000473;2.52e-17;39!CL:0000234;2.52e-17;39!CL:0000766;6.28e-16;69!CL:0002087;3.20e-11;104!CL:0000738;4.78e-10;136!CL:0000763;4.21e-08;100!CL:0000988;5.07e-07;177!CL:0000094;9.83e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.83e-45,136;CL:0002087,5.37e-37,115;CL:0000037,2.46e-36,168;CL:0002031,5.02e-36,120;CL:0000766,6.96e-35,72;CL:0002032,1.26e-33,161;CL:0000837,1.26e-33,161;CL:0000988,4.12e-33,177;CL:0000557,1.88e-31,67;CL:0002009,2.15e-29,61;CL:0002194,3.94e-28,59;CL:0000576,3.94e-28,59;CL:0000040,3.94e-28,59;CL:0000559,3.94e-28,59;CL:0000473,6.68e-28,48;CL:0000234,6.68e-28,48;CL:0000839,6.24e-27,66;CL:0000860,1.14e-26,42;CL:0002057,1.14e-26,42;CL:0000763,9.97e-24,108;CL:0000049,9.97e-24,108;CL:0000542,3.41e-09,53;CL:0000051,3.41e-09,53;CL:0000838,4.38e-09,52;CL:0002393,3.79e-07,9;CL:0002397,3.79e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-19;42!CL:0000049;7.86e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.04e-33!102;UBERON:0003061!4.04e-33!102;UBERON:0002193!3.17e-28!112;UBERON:0002371!1.26e-24!80;UBERON:0001474!5.82e-23!86;UBERON:0004765!1.62e-19!101;UBERON:0001434!1.62e-19!101;UBERON:0002405!3.73e-18!115;UBERON:0000178!6.67e-08!15;UBERON:0000179!6.67e-08!15;UBERON:0000463!6.67e-08!15;UBERON:0007023!2.77e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.74e-08;15!UBERON:0000179;5.74e-08;15!UBERON:0000463;5.74e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.52e-34,98;UBERON:0003061,9.52e-34,98;UBERON:0002193,1.27e-28,108;UBERON:0002371,3.08e-25,76;UBERON:0001474,1.89e-23,82;UBERON:0002405,5.71e-22,93;UBERON:0004765,9.98e-20,90;UBERON:0001434,4.24e-19,100;UBERON:0000178,6.67e-08,15;UBERON:0000179,6.67e-08,15;UBERON:0000463,6.67e-08,15;UBERON:0007023,2.56e-07,114 | |||
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| ||
|short_description=p1@IPMK | |short_description=p1@IPMK | ||
}} | }} |
Latest revision as of 14:20, 18 September 2015
Short description: | p1@IPMK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IPMK_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000373935, NM_152230, uc001jkb.2_5end |
EntrezGene: | IPMK |
HGNC: | 20739 |
UniProt: | Q8NFU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.83e-45 | 136 |
nongranular leukocyte | 5.37e-37 | 115 |
hematopoietic stem cell | 2.46e-36 | 168 |
hematopoietic lineage restricted progenitor cell | 5.02e-36 | 120 |
myeloid leukocyte | 6.96e-35 | 72 |
hematopoietic oligopotent progenitor cell | 1.26e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.26e-33 | 161 |
hematopoietic cell | 4.12e-33 | 177 |
granulocyte monocyte progenitor cell | 1.88e-31 | 67 |
macrophage dendritic cell progenitor | 2.15e-29 | 61 |
monopoietic cell | 3.94e-28 | 59 |
monocyte | 3.94e-28 | 59 |
monoblast | 3.94e-28 | 59 |
promonocyte | 3.94e-28 | 59 |
defensive cell | 6.68e-28 | 48 |
phagocyte | 6.68e-28 | 48 |
myeloid lineage restricted progenitor cell | 6.24e-27 | 66 |
classical monocyte | 1.14e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-26 | 42 |
myeloid cell | 9.97e-24 | 108 |
common myeloid progenitor | 9.97e-24 | 108 |
lymphocyte | 3.41e-09 | 53 |
common lymphoid progenitor | 3.41e-09 | 53 |
lymphoid lineage restricted progenitor cell | 4.38e-09 | 52 |
intermediate monocyte | 3.79e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.52e-34 | 98 |
blood island | 9.52e-34 | 98 |
hemolymphoid system | 1.27e-28 | 108 |
bone marrow | 3.08e-25 | 76 |
bone element | 1.89e-23 | 82 |
immune system | 5.71e-22 | 93 |
skeletal element | 9.98e-20 | 90 |
skeletal system | 4.24e-19 | 100 |
blood | 6.67e-08 | 15 |
haemolymphatic fluid | 6.67e-08 | 15 |
organism substance | 6.67e-08 | 15 |
adult organism | 2.56e-07 | 114 |