FFCP PHASE1:Hg19::chr1:170632647..170632659,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=372bp_to_ENST00000367760_5end | |association_with_transcript=372bp_to_ENST00000367760_5end | ||
|cluster_id=chr1:170632647..170632659,+ | |||
|coexpression_cluster_id=C929 | |||
|description=CAGE_peak_17_at_PRRX1_5end | |description=CAGE_peak_17_at_PRRX1_5end | ||
|id=chr1:170632647..170632659,+ | |id=chr1:170632647..170632659,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.63e-32!180;CL:0000057!2.64e-27!75;CL:0002620!2.57e-12!23;CL:0000048!5.67e-10!430;CL:0002334!2.67e-09!12;CL:0000723!3.00e-09!436;CL:0000680!3.74e-09!57;CL:0000056!3.74e-09!57;CL:0000355!3.74e-09!57;CL:0000034!1.32e-08!444;CL:0000187!4.48e-08!54;CL:0000183!4.36e-07!59;CL:0002539!7.76e-07!10 | |ontology_enrichment_celltype=CL:0000055!5.63e-32!180;CL:0000057!2.64e-27!75;CL:0002620!2.57e-12!23;CL:0000048!5.67e-10!430;CL:0002334!2.67e-09!12;CL:0000723!3.00e-09!436;CL:0000680!3.74e-09!57;CL:0000056!3.74e-09!57;CL:0000355!3.74e-09!57;CL:0000034!1.32e-08!444;CL:0000187!4.48e-08!54;CL:0000183!4.36e-07!59;CL:0002539!7.76e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000057;5.15e-11;73!CL:0002570;5.70e-11;8!CL:0002334;7.76e-11;12!CL:0000134;1.17e-08;55!CL:0000569;3.45e-08;4!CL:0002556;5.91e-08;6!CL:0000723;6.27e-08;61!CL:0002620;7.28e-08;23!CL:0000048;1.15e-07;58!CL:0002320;2.82e-07;188!CL:0002551;4.12e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.65e-24,76;CL:0000048,1.52e-16,427;CL:0000723,5.71e-16,433;CL:0000034,3.14e-15,441;CL:0000134,4.08e-15,354;CL:0002320,5.52e-15,361;CL:0000219,4.21e-13,386;CL:0002570,4.49e-11,8;CL:0002334,8.18e-11,12;CL:0000569,2.93e-08,4;CL:0000011,2.93e-08,4;CL:0002556,3.88e-08,6;CL:0002620,8.28e-08,23;CL:0002551,5.18e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000011;3.45e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.34e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.74e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.37e-14!83;UBERON:0002329!2.37e-14!83;UBERON:0003077!2.37e-14!83;UBERON:0003059!2.37e-14!83;UBERON:0007282!2.37e-14!83;UBERON:0009618!2.37e-14!83;UBERON:0007285!2.37e-14!83;UBERON:0004290!4.19e-12!70;UBERON:0003102!1.48e-10!95;UBERON:0000486!2.01e-10!82;UBERON:0001134!2.48e-09!61;UBERON:0002036!2.48e-09!61;UBERON:0003082!2.48e-09!61;UBERON:0002385!1.16e-08!63;UBERON:0001015!1.16e-08!63;UBERON:0000383!1.16e-08!63;UBERON:0000475!1.51e-08!365;UBERON:0002199!5.03e-08!45;UBERON:0002416!5.03e-08!45;UBERON:0004573!2.03e-07!33;UBERON:0004571!2.03e-07!33;UBERON:0002097!2.71e-07!40;UBERON:0001013!6.91e-07!14;UBERON:0004237!7.76e-07!10;UBERON:0004695!7.76e-07!10;UBERON:0002111!7.76e-07!10;UBERON:0004178!7.76e-07!10;UBERON:0000479!8.48e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.49e-11;14!UBERON:0002384;8.36e-11;198!UBERON:0002119;2.23e-08;4!UBERON:0001758;5.91e-08;6!UBERON:0003672;5.91e-08;6!UBERON:0001434;8.14e-07;36!UBERON:0003129;9.80e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.31e-14,371;UBERON:0001013,2.33e-11,14;UBERON:0003102,1.07e-08,99;UBERON:0002119,1.67e-08,4;UBERON:0001758,3.88e-08,6;UBERON:0003672,3.88e-08,6;UBERON:0003129,6.89e-07,7 | |||
|phase1_expression=1.63510541343501,2.35510576280081,0.986680828671798,2.00146596706261,0,1.74467704820074,0,0,2.35067065379855,0,0,0,0,0.123766352960047,0,2.01697543935533,2.41077811209591,2.19093027116212,4.39139518911456,0,0.408001382488506,0,0,0.684372125364421,0.125542639594803,1.22261449196722,0.985207073399349,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.50401373190767,1.01392563272577,1.5905718941022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.39293562831038,0.264818361626438,2.29469296599051,2.4826786753885,0.560677600142307,1.06748995729705,0,0.311211035399766,0.404132016209064,0.163461903113459,0.151357427644931,0,0,1.24864030732128,0.570471821544449,1.49448680551801,2.11382097558777,2.42809416552197,2.38766371393822,1.42907919878425,3.0708579327942,0.413303124703062,4.75201142912821,7.17074094907815,0,0,3.53505839303539,2.50237039743928,0.831192346452549,1.75591048352335,7.35570709917647,3.75595147266492,0.453728732640084,1.25572744982203,1.06778694409284,0.211931901159562,0,0.309157587715317,0.772921620136887,0.558350568994769,0.843881661206331,1.75386609290158,0.757301322732344,0.368199594569197,1.77810662500693,1.42003837006646,0.906768884048762,1.18692414617341,0,0,0,0,0,0.232387885739037,0,0,0,0,5.78916844373597,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.2933531432838,0.258543431515556,0,2.535908257668,0.531876233169741,2.08014873822732,0.257207374262142,0,1.3321108950805,0.142977993658148,0,0,2.28015329005615,0,0,0,0,0,0,0,0,0.239624855491583,2.29723871668228,0,0.579125226670317,1.2328579353023,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0,7.27898015357825,5.17444067511769,2.99634588564476,8.19989904948992,0.300946099727719,0,1.03473071292505,1.32845119707087,0.368738337083406,1.12948698808508,0.391602314925481,0,0,0,0,0,0,0,1.24053903909388,2.14846762603287,2.80660094433074,0.640695746278505,3.07024349440022,0.160853921143607,1.48418066444991,4.1636617326717,0.710246901252508,6.65229963711854,1.55776328755086,2.44041794765914,0,0,0,0,1.0925470080403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,1.06337790121334,0.462145851343933,0.767518373630648,1.24052915236078,0.107420244868274,0.435050081742686,0.511359764496605,0.712256285173899,0,0,0,0,0.464845549297286,0.31481234683064,0.6970372701606,0.308033580176089,1.06461206063404,0.869932992075073,0.18532421910392,0.572499546967965,0,0.316379424718726,0,0.255897791311334,1.28381696410176,0.318203247925937,0.78494864019923,0.539617372749944,0.274537029736055,0,0.404364963146632,0,0.421258456238981,0,2.92456187557541,0,0.545999645631943,0.141405431953713,5.65040583101214,1.65409603063837,0,0.876901770507525,0,0,0,0,1.40847801266121,0,0,0,0.354761064070598,2.9555068941673,2.63435914367922,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0.276283915531148,0,0,1.23084805461069,2.17727711363265,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,0.923403102045565,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.404406797884062,0.802577647298789,0,0,0,0,0.789168805698781,0,0,1.5796644907122,0,0,0,0,0,0,0,1.8027707491708,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0.993573058514948,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0.67952103036807,0.209205692624666,0,0,0.600420288709789,0.958337652243951,0,0,0,0.837847203816763,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,2.5426853765475,0,0,0.326587360109409,0,0,0.511164065356265,0,0,0,0.646414781807753,0.66116300871345,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0.886068179966986,0.122026264901963,0.1251909307065,0.573409195690071,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,4.32838928371935,3.03827302801392,1.66441758450784,3.97746311077687,2.76724691927833,1.77962244319307,1.60188047877847,4.38569678913393,4.19680441573507,4.28779934969938,3.66382564476516,3.14862178514523,4.50262574941152,2.90294345488599,1.86089200190596,1.5652351854352,0.150257608997218,0,0.406870733204662,3.81882184325375,0.322231671127465,1.39210127963548,0,0,5.15093557774189,2.69399591012735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,6.81192015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| ||
|short_description=p17@PRRX1 | |short_description=p17@PRRX1 | ||
}} | }} |
Latest revision as of 14:15, 18 September 2015
Short description: | p17@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PRRX1_5end |
Coexpression cluster: | C929_myxofibrosarcoma_Fibroblast_normal_Olfactory_mesenchymal_dura_Preadipocyte |
Association with transcript: | 372bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.65e-24 | 76 |
multi fate stem cell | 1.52e-16 | 427 |
somatic stem cell | 5.71e-16 | 433 |
stem cell | 3.14e-15 | 441 |
mesenchymal cell | 4.08e-15 | 354 |
connective tissue cell | 5.52e-15 | 361 |
motile cell | 4.21e-13 | 386 |
mesenchymal stem cell of adipose | 4.49e-11 | 8 |
preadipocyte | 8.18e-11 | 12 |
cardiac mesenchymal cell | 2.93e-08 | 4 |
migratory trunk neural crest cell | 2.93e-08 | 4 |
fibroblast of periodontium | 3.88e-08 | 6 |
skin fibroblast | 8.28e-08 | 23 |
fibroblast of dermis | 5.18e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.31e-14 | 371 |
adipose tissue | 2.33e-11 | 14 |
surface structure | 1.07e-08 | 99 |
left ovary | 1.67e-08 | 4 |
periodontium | 3.88e-08 | 6 |
dentition | 3.88e-08 | 6 |
skull | 6.89e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.74e-07 | 14 |