FFCP PHASE1:Hg19::chr1:170632527..170632533,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:170632527..170632533,+
|short_description=p32@PRRX1
|description=CAGE_peak_32_at_PRRX1_5end
|association_with_transcript=252bp_to_ENST00000367760_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=252bp_to_ENST00000367760_5end | |||
|cluster_id=chr1:170632527..170632533,+ | |||
|description=CAGE_peak_32_at_PRRX1_5end | |||
|id=chr1:170632527..170632533,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.86e-14!180;CL:0000057!7.06e-13!75;CL:0002556!1.78e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002552;8.11e-10;5!CL:0000197;2.51e-08;6!CL:0000098;2.51e-08;6!CL:0002556;2.51e-08;6!CL:0002167;2.51e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,1.21e-09,5;CL:0002556,2.09e-08,6;CL:0000197,2.43e-08,6;CL:0000098,2.43e-08,6;CL:0002167,2.43e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.96e-12;1 | |||
|ontology_enrichment_disease_v019=DOID:4231;7.60e-07;2!DOID:1907;7.60e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,6.42e-07,2;DOID:1907,6.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000033!1.63e-11!123;UBERON:0000153!2.09e-11!129;UBERON:0007811!2.09e-11!129;UBERON:0000475!4.43e-11!365;UBERON:0000924!5.21e-10!173;UBERON:0006601!5.21e-10!173;UBERON:0004121!4.16e-09!169;UBERON:0001758!1.78e-08!6;UBERON:0003672!1.78e-08!6;UBERON:0007023!4.55e-08!115;UBERON:0003102!5.79e-08!95;UBERON:0000914!6.24e-08!83;UBERON:0002329!6.24e-08!83;UBERON:0003077!6.24e-08!83;UBERON:0003059!6.24e-08!83;UBERON:0007282!6.24e-08!83;UBERON:0009618!6.24e-08!83;UBERON:0007285!6.24e-08!83;UBERON:0000073!9.87e-08!94;UBERON:0001016!9.87e-08!94;UBERON:0002346!2.39e-07!90;UBERON:0005743!6.27e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.96e-12;1!UBERON:0007195;1.96e-12;1!UBERON:0001758;2.51e-08;6!UBERON:0003672;2.51e-08;6!UBERON:0003129;2.95e-07;7!UBERON:0002360;7.60e-07;2!UBERON:0000094;7.60e-07;2!UBERON:0010743;7.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,2.20e-12,1;UBERON:0007645,2.20e-12,1;UBERON:0007647,2.20e-12,1;UBERON:0010115,2.20e-12,1;UBERON:0007195,4.31e-12,1;UBERON:0001758,2.09e-08,6;UBERON:0003672,2.09e-08,6;UBERON:0003129,2.52e-07,7;UBERON:0002360,8.06e-07,2;UBERON:0000094,8.06e-07,2;UBERON:0010743,8.06e-07,2 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0.37129905888014,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,1.13658359293342,1.18800285728205,0.741800787835671,0,0,0.673344455816265,0.500474079487857,1.6623846929051,0.438977620880838,0.919463387397059,1.35214253015937,0.340296549480063,0,0.427114777637135,0.211931901159562,0,0,0,0.37223371266318,0.675105328965065,0,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,1.66376689224646,0.178428988797162,0.788512075169673,1.17141414992713,0.300946099727719,0,0,1.99267679560631,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,1.07423381301644,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0.532685175939381,0.246381468041427,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0.322260734604821,0.290033387828457,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0.354761064070598,0.844430541190656,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.597743964753209,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0,0.461701551022782,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,1.20054501294127,0,0,0,0,0,0,0,1.38674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0.5085370753095,0,0,0,0,0,1.19271615249795,0,0,0,0.646414781807753,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.332787154610557,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,1.47284760201473,0,0,0,0.646948868380091,0,0,0,0.425149840203366,0.123935764259002,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0.690359926060101,1.79024599904647,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0.695433089210318,0.801711364730253,0,0.3414369541879,0.691259661814092,0,0.473328002922261,0.170426809518315,0,0,0,0,0,0,0,0,0.615976841137482,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0.473314686579554,0,0,0,0.743990036333503,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0.151557396436479,0,0,0.517164979309476,0.213233981900981,0,0.0645889098360061,0,0,0.12729431655633,0.404234377916439,0,0.684466602170562,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 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|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0.37129905888014,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,1.13658359293342,1.18800285728205,0.741800787835671,0,0,0.673344455816265,0.500474079487857,1.6623846929051,0.438977620880838,0.919463387397059,1.35214253015937,0.340296549480063,0,0.427114777637135,0.211931901159562,0,0,0,0.37223371266318,0.675105328965065,0,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,1.66376689224646,0.178428988797162,0.788512075169673,1.17141414992713,0.300946099727719,0,0,1.99267679560631,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,1.07423381301644,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0.532685175939381,0.246381468041427,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0.322260734604821,0.290033387828457,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0.354761064070598,0.844430541190656,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.597743964753209,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0,0.461701551022782,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,1.20054501294127,0,0,0,0,0,0,0,1.38674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0.5085370753095,0,0,0,0,0,1.19271615249795,0,0,0,0.646414781807753,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.332787154610557,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,1.47284760201473,0,0,0,0.646948868380091,0,0,0,0.425149840203366,0.123935764259002,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0.690359926060101,1.79024599904647,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0.695433089210318,0.801711364730253,0,0.3414369541879,0.691259661814092,0,0.473328002922261,0.170426809518315,0,0,0,0,0,0,0,0,0.615976841137482,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0.473314686579554,0,0,0,0.743990036333503,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0.151557396436479,0,0,0.517164979309476,0.213233981900981,0,0.0645889098360061,0,0,0.12729431655633,0.404234377916439,0,0.684466602170562,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p32@PRRX1 | |||
}} | }} |
Latest revision as of 14:14, 18 September 2015
Short description: | p32@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_PRRX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 252bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 1.21e-09 | 5 |
fibroblast of periodontium | 2.09e-08 | 6 |
receptor cell | 2.43e-08 | 6 |
sensory epithelial cell | 2.43e-08 | 6 |
olfactory epithelial cell | 2.43e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
dura mater | 2.20e-12 | 1 |
future meninx | 2.20e-12 | 1 |
ectomeninx | 2.20e-12 | 1 |
future dura mater | 2.20e-12 | 1 |
stroma of bone marrow | 4.31e-12 | 1 |
periodontium | 2.09e-08 | 6 |
dentition | 2.09e-08 | 6 |
skull | 2.52e-07 | 7 |
meninx | 8.06e-07 | 2 |
membrane organ | 8.06e-07 | 2 |
meningeal cluster | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 6.42e-07 | 2 |
malignant fibroxanthoma | 6.42e-07 | 2 |