FFCP PHASE1:Hg19::chr12:49076002..49076043,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54934 | |EntrezGene=54934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26024 | |HGNC=26024 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H9L4,F8VX10,F8VRX7,F8VUX5 | |UniProt=Q9H9L4,F8VX10,F8VRX7,F8VUX5 | ||
|association_with_transcript=0bp_to_ENST00000357861,ENST00000420613,ENST00000548254,ENST00000550347,ENST00000550870,ENST00000550931,NM_017822,uc001rrx.2,uc001rry.2,uc001rrz.2_5end | |association_with_transcript=0bp_to_ENST00000357861,ENST00000420613,ENST00000548254,ENST00000550347,ENST00000550870,ENST00000550931,NM_017822,uc001rrx.2,uc001rry.2,uc001rrz.2_5end | ||
|cluster_id=chr12:49076002..49076043,- | |||
|coexpression_cluster_id=C593 | |coexpression_cluster_id=C593 | ||
|description=CAGE_peak_1_at_KANSL2_5end | |description=CAGE_peak_1_at_KANSL2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000838!1.05e-17!52;CL:0000542!2.03e-17!53;CL:0000051!2.03e-17!53;CL:0000037!8.63e-14!172;CL:0000566!8.63e-14!172;CL:0000988!2.32e-12!182;CL:0002032!3.96e-11!165;CL:0000837!3.96e-11!165;CL:0000738!5.50e-11!140;CL:0000791!5.01e-10!18;CL:0000789!5.01e-10!18;CL:0002420!5.01e-10!18;CL:0002419!5.01e-10!18;CL:0000790!5.01e-10!18;CL:0000084!1.75e-09!25;CL:0000827!1.75e-09!25;CL:0000945!9.05e-08!24;CL:0000826!9.05e-08!24;CL:0000236!1.40e-07!14;CL:0000625!6.41e-07!11 | |ontology_enrichment_celltype=CL:0000838!1.05e-17!52;CL:0000542!2.03e-17!53;CL:0000051!2.03e-17!53;CL:0000037!8.63e-14!172;CL:0000566!8.63e-14!172;CL:0000988!2.32e-12!182;CL:0002032!3.96e-11!165;CL:0000837!3.96e-11!165;CL:0000738!5.50e-11!140;CL:0000791!5.01e-10!18;CL:0000789!5.01e-10!18;CL:0002420!5.01e-10!18;CL:0002419!5.01e-10!18;CL:0000790!5.01e-10!18;CL:0000084!1.75e-09!25;CL:0000827!1.75e-09!25;CL:0000945!9.05e-08!24;CL:0000826!9.05e-08!24;CL:0000236!1.40e-07!14;CL:0000625!6.41e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;6.41e-11;53!CL:0000791;3.84e-10;18!CL:0000789;3.84e-10;18!CL:0002419;3.84e-10;18!CL:0000084;1.11e-09;25!CL:0000236;5.72e-08;13!CL:0000945;1.21e-07;24!CL:0000625;5.51e-07;11 | |ontology_enrichment_celltype_v019=CL:0000542;6.41e-11;53!CL:0000791;3.84e-10;18!CL:0000789;3.84e-10;18!CL:0002419;3.84e-10;18!CL:0000084;1.11e-09;25!CL:0000236;5.72e-08;13!CL:0000945;1.21e-07;24!CL:0000625;5.51e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.05e-17,52;CL:0000542,2.03e-17,53;CL:0000051,2.03e-17,53;CL:0000037,2.37e-13,168;CL:0000988,2.44e-12,177;CL:0002032,1.02e-10,161;CL:0000837,1.02e-10,161;CL:0000738,1.40e-10,136;CL:0000791,5.01e-10,18;CL:0000789,5.01e-10,18;CL:0002420,5.01e-10,18;CL:0002419,5.01e-10,18;CL:0000790,5.01e-10,18;CL:0000084,1.75e-09,25;CL:0000827,1.75e-09,25;CL:0000945,9.05e-08,24;CL:0000826,9.05e-08,24;CL:0000236,1.40e-07,14;CL:0000625,6.41e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;6.41e-11;53!CL:0000790;3.84e-10;18 | |ontology_enrichment_development_v019=CL:0000051;6.41e-11;53!CL:0000790;3.84e-10;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@KANSL2 | |short_description=p1@KANSL2 | ||
}} | }} |
Latest revision as of 14:10, 18 September 2015
Short description: | p1@KANSL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KANSL2_5end |
Coexpression cluster: | C593_Dendritic_CD8_Natural_CD4_CD19_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000357861, ENST00000420613, ENST00000548254, ENST00000550347, ENST00000550870, ENST00000550931, NM_017822, uc001rrx.2, uc001rry.2, uc001rrz.2_5end |
EntrezGene: | KANSL2 |
HGNC: | 26024 |
UniProt: | Q9H9L4F8VX10F8VRX7F8VUX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.05e-17 | 52 |
lymphocyte | 2.03e-17 | 53 |
common lymphoid progenitor | 2.03e-17 | 53 |
hematopoietic stem cell | 2.37e-13 | 168 |
hematopoietic cell | 2.44e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.02e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-10 | 161 |
leukocyte | 1.40e-10 | 136 |
mature alpha-beta T cell | 5.01e-10 | 18 |
alpha-beta T cell | 5.01e-10 | 18 |
immature T cell | 5.01e-10 | 18 |
mature T cell | 5.01e-10 | 18 |
immature alpha-beta T cell | 5.01e-10 | 18 |
T cell | 1.75e-09 | 25 |
pro-T cell | 1.75e-09 | 25 |
lymphocyte of B lineage | 9.05e-08 | 24 |
pro-B cell | 9.05e-08 | 24 |
B cell | 1.40e-07 | 14 |
CD8-positive, alpha-beta T cell | 6.41e-07 | 11 |