FFCP PHASE1:Hg19::chr17:1012305..1012356,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=B3KW89,Q12979,Q6ZT60 | |UniProt=B3KW89,Q12979,Q6ZT60 | ||
|association_with_transcript=0bp_to_ENST00000291107,NM_001092,uc002fsg.2_5end | |association_with_transcript=0bp_to_ENST00000291107,NM_001092,uc002fsg.2_5end | ||
|cluster_id=chr17:1012305..1012356,- | |||
|description=CAGE_peak_2_at_ABR_5end | |description=CAGE_peak_2_at_ABR_5end | ||
|id=chr17:1012305..1012356,- | |id=chr17:1012305..1012356,- | ||
|ontology_enrichment_celltype=CL:0000003!6.32e-09!722;CL:0002371!5.76e-08!591;CL:1000497!2.84e-07!18;CL:0002518!2.84e-07!18;CL:1000449!4.20e-07!16 | |ontology_enrichment_celltype=CL:0000003!6.32e-09!722;CL:0002371!5.76e-08!591;CL:1000497!2.84e-07!18;CL:0002518!2.84e-07!18;CL:1000449!4.20e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000497;4.09e-08;17!CL:0002518;4.09e-08;17!CL:1000449;5.96e-08;15!CL:1000507;1.88e-07;10!CL:1000494;1.88e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,4.92e-08,17;CL:0002518,4.92e-08,17;CL:1000449,6.39e-08,15;CL:1000507,2.06e-07,10;CL:1000494,2.06e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!7.46e-14!216;UBERON:0000926!4.67e-08!448;UBERON:0004120!4.67e-08!448;UBERON:0006603!4.67e-08!448;UBERON:0001637!8.75e-08!42;UBERON:0003509!8.75e-08!42;UBERON:0004572!8.75e-08!42;UBERON:0001981!1.23e-07!60;UBERON:0007500!1.23e-07!60;UBERON:0004537!1.23e-07!60;UBERON:0006965!1.23e-07!60;UBERON:0000055!1.28e-07!69;UBERON:0003914!1.67e-07!118;UBERON:0001009!2.03e-07!113;UBERON:0004535!3.33e-07!110;UBERON:0004211!4.20e-07!16;UBERON:0001285!4.20e-07!16;UBERON:0007684!4.20e-07!16;UBERON:0003220!4.20e-07!16;UBERON:0004208!4.20e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.96e-08;15!UBERON:0004819;5.96e-08;15!UBERON:0001285;5.96e-08;15!UBERON:0007684;5.96e-08;15!UBERON:0004211;1.88e-07;10!UBERON:0009773;1.88e-07;10!UBERON:0001231;1.88e-07;10!UBERON:0004810;1.88e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.14e-11,203;UBERON:0004211,6.39e-08,15;UBERON:0009773,6.39e-08,15;UBERON:0001231,6.39e-08,15;UBERON:0001285,6.39e-08,15;UBERON:0007684,6.39e-08,15;UBERON:0004208,6.39e-08,15;UBERON:0001637,8.72e-08,42;UBERON:0003509,8.72e-08,42;UBERON:0004572,8.72e-08,42;UBERON:0007500,8.75e-08,59;UBERON:0001981,8.75e-08,59;UBERON:0004537,8.75e-08,59;UBERON:0006965,8.75e-08,59;UBERON:0000055,9.50e-08,68;UBERON:0003914,9.82e-08,117;UBERON:0001009,1.67e-07,112;UBERON:0004810,2.06e-07,10;UBERON:0004535,2.75e-07,109;UBERON:0006555,4.75e-07,16;UBERON:0004819,4.75e-07,16 | |||
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| ||
|short_description=p2@ABR | |short_description=p2@ABR | ||
}} | }} |
Latest revision as of 14:06, 18 September 2015
Short description: | p2@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000291107, NM_001092, uc002fsg.2_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | B3KW89Q12979Q6ZT60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 4.92e-08 | 17 |
kidney epithelial cell | 4.92e-08 | 17 |
epithelial cell of nephron | 6.39e-08 | 15 |
kidney tubule cell | 2.06e-07 | 10 |
nephron tubule epithelial cell | 2.06e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.14e-11 | 203 |
nephron epithelium | 6.39e-08 | 15 |
renal tubule | 6.39e-08 | 15 |
nephron tubule | 6.39e-08 | 15 |
nephron | 6.39e-08 | 15 |
uriniferous tubule | 6.39e-08 | 15 |
nephrogenic mesenchyme | 6.39e-08 | 15 |
artery | 8.72e-08 | 42 |
arterial blood vessel | 8.72e-08 | 42 |
arterial system | 8.72e-08 | 42 |
epithelial tube open at both ends | 8.75e-08 | 59 |
blood vessel | 8.75e-08 | 59 |
blood vasculature | 8.75e-08 | 59 |
vascular cord | 8.75e-08 | 59 |
vessel | 9.50e-08 | 68 |
epithelial tube | 9.82e-08 | 117 |
circulatory system | 1.67e-07 | 112 |
nephron tubule epithelium | 2.06e-07 | 10 |
cardiovascular system | 2.75e-07 | 109 |
excretory tube | 4.75e-07 | 16 |
kidney epithelium | 4.75e-07 | 16 |