FFCP PHASE1:Hg19::chr1:53925516..53925575,+: Difference between revisions
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|id=chr1:53925516..53925575,+
|short_description=p1@DMRTB1
|description=CAGE_peak_1_at_DMRTB1_5end
|association_with_transcript=33bp_to_ENST00000431335_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63948 | |EntrezGene=63948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13913 | |HGNC=13913 | ||
|TSSclassifier=strong | |||
|UniProt=B4DXR0 | |UniProt=B4DXR0 | ||
|association_with_transcript=33bp_to_ENST00000431335_5end | |||
|cluster_id=chr1:53925516..53925575,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_DMRTB1_5end | |||
|id=chr1:53925516..53925575,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.65e-18!5;CL:0000039!2.52e-08!7;CL:0000586!2.52e-08!7;CL:0000167!4.06e-07!1;CL:0000164!4.06e-07!1;CL:0000502!4.06e-07!1;CL:0000172!4.06e-07!1;CL:0000173!4.06e-07!1;CL:0002351!4.06e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.19e-17;7!CL:0000586;4.19e-17;7!CL:0002567;1.20e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.02e-17,7;CL:0000586,4.02e-17,7;CL:0002567,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.33e-45;10!UBERON:0005564;1.33e-45;10 | |||
|ontology_enrichment_disease=DOID:4430!4.06e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!2.23e-19!11;UBERON:0000473!6.06e-19!8;UBERON:0003101!2.17e-09!22;UBERON:0000079!2.17e-09!22;UBERON:0002171!2.52e-07!1;UBERON:0006518!2.52e-07!1;UBERON:0008949!2.52e-07!1;UBERON:0000101!2.52e-07!1;UBERON:0002167!2.52e-07!1;UBERON:0001301!2.84e-07!1;UBERON:0000991!4.80e-07!21;UBERON:0009196!4.80e-07!21;UBERON:0009117!4.80e-07!21;UBERON:0005564!4.80e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.52e-57;8!UBERON:0003135;1.57e-41;11!UBERON:0000991;4.29e-22;21!UBERON:0003101;4.05e-21;22!UBERON:0000079;4.05e-21;22!UBERON:0002323;7.01e-09;45!UBERON:0003133;2.96e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.93e-57,8;UBERON:0003135,1.49e-41,11;UBERON:0000991,4.18e-22,21;UBERON:0009196,4.18e-22,21;UBERON:0009117,4.18e-22,21;UBERON:0005564,4.18e-22,21;UBERON:0004176,3.95e-21,22;UBERON:0003101,3.95e-21,22;UBERON:0000079,3.95e-21,22;UBERON:0002323,2.16e-10,46;UBERON:0003133,5.61e-10,48;UBERON:0004458,8.77e-10,49;UBERON:0003886,6.41e-09,54;UBERON:0005156,3.36e-08,59;UBERON:0000990,3.36e-08,59;UBERON:0002553,6.05e-08,61 | |||
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|short_description=p1@DMRTB1 | |||
}} | }} |
Latest revision as of 13:55, 18 September 2015
Short description: | p1@DMRTB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DMRTB1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 33bp_to_ENST00000431335_5end |
EntrezGene: | DMRTB1 |
HGNC: | 13913 |
UniProt: | B4DXR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.02e-17 | 7 |
germ cell | 4.02e-17 | 7 |
light melanocyte | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 7.93e-57 | 8 |
male reproductive organ | 1.49e-41 | 11 |
gonad | 4.18e-22 | 21 |
indifferent external genitalia | 4.18e-22 | 21 |
indifferent gonad | 4.18e-22 | 21 |
gonad primordium | 4.18e-22 | 21 |
external genitalia | 3.95e-21 | 22 |
male organism | 3.95e-21 | 22 |
male reproductive system | 3.95e-21 | 22 |
body cavity | 2.16e-10 | 46 |
reproductive organ | 5.61e-10 | 48 |
body cavity or lining | 8.77e-10 | 49 |
body cavity precursor | 6.41e-09 | 54 |
reproductive structure | 3.36e-08 | 59 |
reproductive system | 3.36e-08 | 59 |
anatomical cavity | 6.05e-08 | 61 |