FFCP PHASE1:Hg19::chr6:36922265..36922280,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221476 | |EntrezGene=221476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21245 | |HGNC=21245 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXB8 | |UniProt=Q6UXB8 | ||
|association_with_transcript=56bp_to_ENST00000373674,NM_153370,uc003omz.1,uc003ona.2,uc003onb.2_5end | |association_with_transcript=56bp_to_ENST00000373674,NM_153370,uc003omz.1,uc003ona.2,uc003onb.2_5end | ||
|cluster_id=chr6:36922265..36922280,+ | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_4_at_PI16_5end | |description=CAGE_peak_4_at_PI16_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000084!1.49e-23!25;CL:0000827!1.49e-23!25;CL:0000791!3.24e-23!18;CL:0000789!3.24e-23!18;CL:0002420!3.24e-23!18;CL:0002419!3.24e-23!18;CL:0000790!3.24e-23!18;CL:0000838!7.03e-20!52;CL:0000542!2.68e-19!53;CL:0000051!2.68e-19!53;CL:0000625!1.24e-14!11;CL:0000624!1.25e-09!6 | |ontology_enrichment_celltype=CL:0000084!1.49e-23!25;CL:0000827!1.49e-23!25;CL:0000791!3.24e-23!18;CL:0000789!3.24e-23!18;CL:0002420!3.24e-23!18;CL:0002419!3.24e-23!18;CL:0000790!3.24e-23!18;CL:0000838!7.03e-20!52;CL:0000542!2.68e-19!53;CL:0000051!2.68e-19!53;CL:0000625!1.24e-14!11;CL:0000624!1.25e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.61e-33;25!CL:0000791;1.19e-31;18!CL:0000789;1.19e-31;18!CL:0002419;1.19e-31;18!CL:0000625;2.68e-21;11!CL:0000542;3.02e-15;53!CL:0000624;4.48e-14;6!CL:0002579;4.13e-10;3!CL:0002580;6.67e-10;3!CL:0002334;8.46e-09;12 | |ontology_enrichment_celltype_v019=CL:0000084;5.61e-33;25!CL:0000791;1.19e-31;18!CL:0000789;1.19e-31;18!CL:0002419;1.19e-31;18!CL:0000625;2.68e-21;11!CL:0000542;3.02e-15;53!CL:0000624;4.48e-14;6!CL:0002579;4.13e-10;3!CL:0002580;6.67e-10;3!CL:0002334;8.46e-09;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.68e-33,25;CL:0000827,7.68e-33,25;CL:0000791,1.34e-31,18;CL:0000789,1.34e-31,18;CL:0002420,1.34e-31,18;CL:0002419,1.34e-31,18;CL:0000790,1.34e-31,18;CL:0000838,3.30e-26,52;CL:0000542,1.35e-25,53;CL:0000051,1.35e-25,53;CL:0000625,3.05e-21,11;CL:0000624,4.44e-14,6;CL:0002579,2.98e-10,3;CL:0002580,6.30e-10,3;CL:0002087,1.92e-09,115;CL:0002334,7.08e-09,12;CL:0002031,5.95e-08,120;CL:0000738,6.39e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000790;1.19e-31;18!CL:0000051;3.02e-15;53 | |ontology_enrichment_development_v019=CL:0000790;1.19e-31;18!CL:0000051;3.02e-15;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.04e-12!15;UBERON:0000179!2.04e-12!15;UBERON:0000463!2.04e-12!15;UBERON:0004457!2.98e-09!12;UBERON:0000042!2.98e-09!12;UBERON:0003688!2.91e-08!6;UBERON:0002358!2.91e-08!6;UBERON:0003684!2.91e-08!6;UBERON:0001178!2.91e-08!6 | |ontology_enrichment_uberon=UBERON:0000178!2.04e-12!15;UBERON:0000179!2.04e-12!15;UBERON:0000463!2.04e-12!15;UBERON:0004457!2.98e-09!12;UBERON:0000042!2.98e-09!12;UBERON:0003688!2.91e-08!6;UBERON:0002358!2.91e-08!6;UBERON:0003684!2.91e-08!6;UBERON:0001178!2.91e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.69e-19;15!UBERON:0000179;5.69e-19;15!UBERON:0000463;5.69e-19;15!UBERON:0004457;1.31e-08;9!UBERON:0000042;1.31e-08;9!UBERON:0003688;1.95e-08;6!UBERON:0002358;1.95e-08;6!UBERON:0003684;1.95e-08;6!UBERON:0001178;1.95e-08;6!UBERON:0002390;2.52e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.69e-19;15!UBERON:0000179;5.69e-19;15!UBERON:0000463;5.69e-19;15!UBERON:0004457;1.31e-08;9!UBERON:0000042;1.31e-08;9!UBERON:0003688;1.95e-08;6!UBERON:0002358;1.95e-08;6!UBERON:0003684;1.95e-08;6!UBERON:0001178;1.95e-08;6!UBERON:0002390;2.52e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.38e-19,15;UBERON:0000179,4.38e-19,15;UBERON:0000463,4.38e-19,15;UBERON:0003688,2.08e-08,6;UBERON:0002358,2.08e-08,6;UBERON:0003684,2.08e-08,6;UBERON:0001178,2.08e-08,6 | |||
|phase1_expression=1.2717486548939,0.214100523890983,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0,0,0,0,3.40855682553327,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0,0,0.426730222566507,1.60158394814405,0.574752439954483,0,3.81621501814146,0,0,0.382273228125229,0,0,0,3.540775862049,5.50215067848831,6.37364646898479,4.51403537554831,0.651844533267181,0.473447805734733,0,3.7879555340959,26.5145316727353,26.1409995608673,26.5387786489715,5.76410938765538,4.03183977435623,0,0.276350017785848,0.579606171470105,1.33457906845854,0,1.04535523804977,2.15287751125376,2.29932296161153,1.37450978193052,1.26509846009751,3.18565414324097,1.30216690771284,1.90090408889675,2.10805166708882,3.07167866770604,2.49861453104692,4.49876778883632,0.821127996921047,0.201606743224732,1.33720097891754,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,2.48485975847659,0.506522046658319,0,1.14734648299525,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.358779271377724,0,0,0.900273288253207,0,0,0.37223371266318,0.337552664482532,0.292311015483596,0.757301322732344,0.0920498986422993,0.969876340912871,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0.112085143993527,1.18218456121156,1.2937654491571,0.898401253958239,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.2942852049117,0.533637789017222,0,0,0,6.4508030032882,1.07423381301644,1.96462066103151,4.10045277618243,2.55853624533352,1.44768529029247,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0,0,2.68084838594413,0,0,0,2.26016233240486,0,1.32687795048244,0,0,0,0,0,0.563391205064483,0,0,0,0,0.211107635297664,6.58589785919804,0,0,0,0,0,0,0,0,0,0,1.52234282769651,2.29391162142713,1.70894156152249,2.38231775457789,3.70226045777575,4.53931317834902,2.16012574895246,3.17250070517708,0,0,0,0,0,0,28.5373028184592,0,2.2980644415884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0.511343412510774,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,1.42939065274673,0,1.77987976358325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,1.17632909849086,0,0,0,0,0.554805861502613,0,0,0,0,0,1.5543720058278,0.295710299979268,0,0,0.155262956876259,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0.686791410365586,0.673498977531838,0,0.192619830407303,0,0,0,0,0,0,1.85280868296583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19986135440423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0.535701835878287,0,0,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,1.35805433935647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.849635573439084,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0.26721740526556,0.275684698604535,0,0.0757786982182394,0,0,0,0,0,0.322944549180031,0.31037357147929,0,0.0636471582781649,0,0,0,0.26940821205835,0.215166616178029,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=1.2717486548939,0.214100523890983,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0,0,0,0,3.40855682553327,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0,0,0.426730222566507,1.60158394814405,0.574752439954483,0,3.81621501814146,0,0,0.382273228125229,0,0,0,3.540775862049,5.50215067848831,6.37364646898479,4.51403537554831,0.651844533267181,0.473447805734733,0,3.7879555340959,26.5145316727353,26.1409995608673,26.5387786489715,5.76410938765538,4.03183977435623,0,0.276350017785848,0.579606171470105,1.33457906845854,0,1.04535523804977,2.15287751125376,2.29932296161153,1.37450978193052,1.26509846009751,3.18565414324097,1.30216690771284,1.90090408889675,2.10805166708882,3.07167866770604,2.49861453104692,4.49876778883632,0.821127996921047,0.201606743224732,1.33720097891754,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,2.48485975847659,0.506522046658319,0,1.14734648299525,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.358779271377724,0,0,0.900273288253207,0,0,0.37223371266318,0.337552664482532,0.292311015483596,0.757301322732344,0.0920498986422993,0.969876340912871,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0.112085143993527,1.18218456121156,1.2937654491571,0.898401253958239,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.2942852049117,0.533637789017222,0,0,0,6.4508030032882,1.07423381301644,1.96462066103151,4.10045277618243,2.55853624533352,1.44768529029247,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0,0,2.68084838594413,0,0,0,2.26016233240486,0,1.32687795048244,0,0,0,0,0,0.563391205064483,0,0,0,0,0.211107635297664,6.58589785919804,0,0,0,0,0,0,0,0,0,0,1.52234282769651,2.29391162142713,1.70894156152249,2.38231775457789,3.70226045777575,4.53931317834902,2.16012574895246,3.17250070517708,0,0,0,0,0,0,28.5373028184592,0,2.2980644415884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0.511343412510774,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,1.42939065274673,0,1.77987976358325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,1.17632909849086,0,0,0,0,0.554805861502613,0,0,0,0,0,1.5543720058278,0.295710299979268,0,0,0.155262956876259,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0.686791410365586,0.673498977531838,0,0.192619830407303,0,0,0,0,0,0,1.85280868296583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19986135440423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0.535701835878287,0,0,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,1.35805433935647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.849635573439084,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0.26721740526556,0.275684698604535,0,0.0757786982182394,0,0,0,0,0,0.322944549180031,0.31037357147929,0,0.0636471582781649,0,0,0,0.26940821205835,0.215166616178029,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p4@PI16 | |short_description=p4@PI16 | ||
}} | }} |
Latest revision as of 13:55, 18 September 2015
Short description: | p4@PI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PI16_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 56bp_to_ENST00000373674, NM_153370, uc003omz.1, uc003ona.2, uc003onb.2_5end |
EntrezGene: | PI16 |
HGNC: | 21245 |
UniProt: | Q6UXB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 7.68e-33 | 25 |
pro-T cell | 7.68e-33 | 25 |
mature alpha-beta T cell | 1.34e-31 | 18 |
alpha-beta T cell | 1.34e-31 | 18 |
immature T cell | 1.34e-31 | 18 |
mature T cell | 1.34e-31 | 18 |
immature alpha-beta T cell | 1.34e-31 | 18 |
lymphoid lineage restricted progenitor cell | 3.30e-26 | 52 |
lymphocyte | 1.35e-25 | 53 |
common lymphoid progenitor | 1.35e-25 | 53 |
CD8-positive, alpha-beta T cell | 3.05e-21 | 11 |
CD4-positive, alpha-beta T cell | 4.44e-14 | 6 |
omentum preadipocyte | 2.98e-10 | 3 |
preadipocyte of the breast | 6.30e-10 | 3 |
nongranular leukocyte | 1.92e-09 | 115 |
preadipocyte | 7.08e-09 | 12 |
hematopoietic lineage restricted progenitor cell | 5.95e-08 | 120 |
leukocyte | 6.39e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 4.38e-19 | 15 |
haemolymphatic fluid | 4.38e-19 | 15 |
organism substance | 4.38e-19 | 15 |
omentum | 2.08e-08 | 6 |
peritoneum | 2.08e-08 | 6 |
abdominal cavity | 2.08e-08 | 6 |
visceral peritoneum | 2.08e-08 | 6 |