FFCP PHASE1:Hg19::chr17:8066256..8066301,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:8066256..8066301,-
|short_description=p1@VAMP2
|description=CAGE_peak_1_at_VAMP2_5end
|association_with_transcript=0bp_to_ENST00000316509,ENST00000481878,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6844 | |EntrezGene=6844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12643 | |HGNC=12643 | ||
|TSSclassifier=strong | |||
|UniProt=P63027 | |UniProt=P63027 | ||
|association_with_transcript=0bp_to_ENST00000316509,ENST00000481878,ENST00000498285,NM_014232,uc010cnt.1_5end | |||
|cluster_id=chr17:8066256..8066301,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_VAMP2_5end | |||
|id=chr17:8066256..8066301,- | |||
|ontology_enrichment_celltype=CL:0000791!1.77e-07!18;CL:0000789!1.77e-07!18;CL:0002420!1.77e-07!18;CL:0002419!1.77e-07!18;CL:0000790!1.77e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.78e-07;18!CL:0000789;1.78e-07;18!CL:0002419;1.78e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.77e-07,18;CL:0000789,1.77e-07,18;CL:0002420,1.77e-07,18;CL:0002419,1.77e-07,18;CL:0000790,1.77e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.85e-09;82!CL:0000790;1.78e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.99e-49!115;UBERON:0001049!3.20e-27!57;UBERON:0005068!3.20e-27!57;UBERON:0006241!3.20e-27!57;UBERON:0007135!3.20e-27!57;UBERON:0005743!1.01e-24!86;UBERON:0001017!1.73e-24!82;UBERON:0000073!3.14e-24!94;UBERON:0001016!3.14e-24!94;UBERON:0000955!3.73e-23!69;UBERON:0006238!3.73e-23!69;UBERON:0002616!4.40e-22!59;UBERON:0002346!1.63e-21!90;UBERON:0003075!2.83e-21!86;UBERON:0007284!2.83e-21!86;UBERON:0002780!4.06e-21!41;UBERON:0001890!4.06e-21!41;UBERON:0006240!4.06e-21!41;UBERON:0003080!7.85e-21!42;UBERON:0001893!5.04e-17!34;UBERON:0002020!6.58e-17!34;UBERON:0003528!6.58e-17!34;UBERON:0002791!2.32e-16!33;UBERON:0001869!6.96e-16!32;UBERON:0003056!1.71e-15!61;UBERON:0000153!3.97e-15!129;UBERON:0007811!3.97e-15!129;UBERON:0000924!5.43e-15!173;UBERON:0006601!5.43e-15!173;UBERON:0004121!1.38e-14!169;UBERON:0002619!1.98e-14!22;UBERON:0000033!6.09e-14!123;UBERON:0001950!3.17e-13!20;UBERON:0000956!9.06e-12!25;UBERON:0000203!9.06e-12!25;UBERON:0000025!2.92e-08!194;UBERON:0003076!1.48e-07!15;UBERON:0003057!1.48e-07!15;UBERON:0002420!7.26e-07!9;UBERON:0007245!7.26e-07!9;UBERON:0010009!7.26e-07!9;UBERON:0010011!7.26e-07!9;UBERON:0000454!7.26e-07!9;UBERON:0002308!9.78e-07!9;UBERON:0000125!9.78e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.50e-15;41!UBERON:0001890;2.50e-15;41!UBERON:0000073;3.31e-15;53!UBERON:0002616;3.31e-15;53!UBERON:0001893;1.34e-14;34!UBERON:0002619;1.99e-14;22!UBERON:0003528;2.45e-14;34!UBERON:0002020;2.45e-14;34!UBERON:0001869;3.42e-14;32!UBERON:0002791;4.15e-14;32!UBERON:0001950;3.19e-13;20!UBERON:0007023;1.14e-12;114!UBERON:0000956;8.89e-12;25!UBERON:0000203;8.89e-12;25!UBERON:0001017;1.07e-11;75!UBERON:0000955;5.96e-11;68!UBERON:0001016;3.74e-10;83!UBERON:0002420;7.25e-07;9!UBERON:0007245;7.25e-07;9!UBERON:0010009;7.25e-07;9!UBERON:0010011;7.25e-07;9!UBERON:0000454;7.25e-07;9!UBERON:0000125;9.77e-07;9!UBERON:0002308;9.77e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.58e-48,114;UBERON:0001049,1.71e-27,56;UBERON:0005068,1.71e-27,56;UBERON:0006241,1.71e-27,56;UBERON:0007135,1.71e-27,56;UBERON:0000073,7.14e-26,53;UBERON:0002616,7.14e-26,53;UBERON:0001017,1.28e-24,81;UBERON:0001016,4.84e-24,89;UBERON:0000955,2.58e-23,68;UBERON:0006238,2.58e-23,68;UBERON:0002346,1.34e-21,86;UBERON:0003075,2.21e-21,82;UBERON:0007284,2.21e-21,82;UBERON:0002780,4.06e-21,41;UBERON:0001890,4.06e-21,41;UBERON:0003080,4.06e-21,41;UBERON:0006240,4.06e-21,41;UBERON:0001893,5.04e-17,34;UBERON:0003528,6.58e-17,34;UBERON:0002020,6.58e-17,34;UBERON:0003056,4.79e-16,61;UBERON:0001869,6.96e-16,32;UBERON:0002791,9.10e-16,32;UBERON:0004121,3.02e-15,171;UBERON:0000924,3.02e-15,171;UBERON:0006601,3.02e-15,171;UBERON:0010371,9.23e-15,104;UBERON:0002619,1.98e-14,22;UBERON:0001950,3.17e-13,20;UBERON:0010314,7.07e-12,132;UBERON:0000956,9.06e-12,25;UBERON:0000203,9.06e-12,25;UBERON:0011216,1.29e-09,223;UBERON:0000025,3.02e-08,192;UBERON:0003076,1.48e-07,15;UBERON:0003057,1.48e-07,15;UBERON:0002420,7.26e-07,9;UBERON:0007245,7.26e-07,9;UBERON:0010009,7.26e-07,9;UBERON:0010011,7.26e-07,9;UBERON:0000454,7.26e-07,9;UBERON:0000125,9.78e-07,9;UBERON:0002308,9.78e-07,9 | |||
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| ||
|short_description=p1@VAMP2 | |||
}} | }} |
Latest revision as of 13:49, 18 September 2015
Short description: | p1@VAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VAMP2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000316509, ENST00000481878, ENST00000498285, NM_014232, uc010cnt.1_5end |
EntrezGene: | VAMP2 |
HGNC: | 12643 |
UniProt: | P63027 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.77e-07 | 18 |
alpha-beta T cell | 1.77e-07 | 18 |
immature T cell | 1.77e-07 | 18 |
mature T cell | 1.77e-07 | 18 |
immature alpha-beta T cell | 1.77e-07 | 18 |