FFCP PHASE1:Hg19::chr1:169555677..169555678,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2153 | |EntrezGene=2153 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3542 | |HGNC=3542 | ||
|TSSclassifier=strong | |||
|UniProt=B4DU26 | |UniProt=B4DU26 | ||
|association_with_transcript=40bp_to_ENST00000546081_5end | |association_with_transcript=40bp_to_ENST00000546081_5end | ||
|cluster_id=chr1:169555677..169555678,- | |||
|coexpression_cluster_id=C3902 | |||
|description=CAGE_peak_4_at_F5_5end | |description=CAGE_peak_4_at_F5_5end | ||
|id=chr1:169555677..169555678,- | |id=chr1:169555677..169555678,- | ||
|ontology_enrichment_celltype=CL:0002057!1.53e-25!42;CL:0000860!3.28e-23!45;CL:0000766!9.68e-17!76;CL:0000738!2.31e-16!140;CL:0002009!3.10e-14!65;CL:0002087!3.52e-14!119;CL:0002194!1.16e-13!63;CL:0000576!1.16e-13!63;CL:0000040!1.16e-13!63;CL:0000559!1.16e-13!63;CL:0000557!2.51e-13!71;CL:0000839!1.82e-12!70;CL:0002031!2.83e-12!124;CL:0000037!9.93e-11!172;CL:0000566!9.93e-11!172;CL:0000988!1.30e-10!182;CL:0002032!1.05e-09!165;CL:0000837!1.05e-09!165;CL:0000763!4.84e-09!112;CL:0000049!4.84e-09!112;CL:0000181!5.39e-09!12;CL:0000417!5.39e-09!12;CL:0000668!5.39e-09!12;CL:0000414!5.39e-09!12;CL:0000412!5.39e-09!12;CL:0000182!5.39e-09!12;CL:0000775!8.36e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.53e-25!42;CL:0000860!3.28e-23!45;CL:0000766!9.68e-17!76;CL:0000738!2.31e-16!140;CL:0002009!3.10e-14!65;CL:0002087!3.52e-14!119;CL:0002194!1.16e-13!63;CL:0000576!1.16e-13!63;CL:0000040!1.16e-13!63;CL:0000559!1.16e-13!63;CL:0000557!2.51e-13!71;CL:0000839!1.82e-12!70;CL:0002031!2.83e-12!124;CL:0000037!9.93e-11!172;CL:0000566!9.93e-11!172;CL:0000988!1.30e-10!182;CL:0002032!1.05e-09!165;CL:0000837!1.05e-09!165;CL:0000763!4.84e-09!112;CL:0000049!4.84e-09!112;CL:0000181!5.39e-09!12;CL:0000417!5.39e-09!12;CL:0000668!5.39e-09!12;CL:0000414!5.39e-09!12;CL:0000412!5.39e-09!12;CL:0000182!5.39e-09!12;CL:0000775!8.36e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000775;3.91e-26;3!CL:0000094;4.18e-17;8!CL:0000081;1.69e-12;11!CL:0000182;1.50e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.74e-26,3;CL:0000094,3.07e-17,8;CL:0000081,1.35e-12,11;CL:0000182,1.68e-11,12;CL:0000766,6.07e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.22e-19;11!UBERON:0009497;5.95e-16;13!UBERON:0006242;1.48e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.48e-09;1!DOID:0060061;1.48e-09;1!DOID:8691;1.48e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.06e-09,1;DOID:0060061,1.06e-09,1;DOID:8691,1.06e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.18e-16!115;UBERON:0002390!4.15e-16!102;UBERON:0003061!4.15e-16!102;UBERON:0002193!2.03e-14!112;UBERON:0002371!7.19e-11!80;UBERON:0001474!1.54e-09!86;UBERON:0005057!5.63e-09!26;UBERON:0007023!2.33e-08!115;UBERON:0002107!4.68e-08!19;UBERON:0006925!4.68e-08!19;UBERON:0008836!4.68e-08!19;UBERON:0004765!5.66e-07!101;UBERON:0001434!5.66e-07!101;UBERON:0009497!8.52e-07!25;UBERON:0000015!8.52e-07!25;UBERON:0002423!8.52e-07!25;UBERON:0006235!8.52e-07!25;UBERON:0004161!8.52e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;9.64e-16;25!UBERON:0002107;1.40e-15;19!UBERON:0006925;1.40e-15;19!UBERON:0002365;2.02e-09;31!UBERON:0002330;2.02e-09;31!UBERON:0002368;6.75e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.21e-15,25;UBERON:0000015,1.21e-15,25;UBERON:0002423,1.21e-15,25;UBERON:0006235,1.21e-15,25;UBERON:0004161,1.21e-15,25;UBERON:0002107,1.60e-15,19;UBERON:0006925,1.60e-15,19;UBERON:0008836,1.60e-15,19;UBERON:0008835,2.40e-13,22;UBERON:0003894,2.40e-13,22;UBERON:0009854,9.57e-13,23;UBERON:0007499,1.09e-11,25;UBERON:0009856,3.20e-11,26;UBERON:0002365,2.47e-09,31;UBERON:0002330,2.47e-09,31;UBERON:0002368,3.28e-08,35;UBERON:0003929,7.85e-07,54;UBERON:0005172,7.85e-07,54;UBERON:0005173,7.85e-07,54 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.492603536699674,0.157421562627358,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.726991193897824,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0,1.7261543539329,0.512321413058201,0.945928919554341,1.37898272294647,0.645484683583826,1.35426486594342,0.564727018627814,0.272906150057846,0,0.918251677112708,0.641858054152187,0,1.31940520074686,0.997318288108159,0,0.290209238628584,0,0,0.75374599577023,1.0429658368404,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0.561643155732475,0.300353785683013,0.803627933485401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.501559486172034,0.32592226663359,0.473447805734733,0,0.557052284425868,0.589211814949674,2.87994062958707,2.16643091012012,0.768547918354051,0.650296737799391,0.164437904603676,0,0,0,0,0,0.339928028092699,0.766440987203842,1.03088233644789,0.253019692019503,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,3.74503511973591,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0,0.648473311192717,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,1.06726497369676,0,1.29681375438695,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0.446342914883745,0.0671834724867263,0,1.16495949527454,0.86661500537946,0.741742725430498,0.943649613958588,2.46068703786872,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,2.4913879725274,1.32506888912221,0,0,0.684347351537318,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,3.44045517414043,0.665574309221114,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.455324382702595,0.709618961301111,0,0,0.135939465953663,0,0,0,0.156986185701028,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.471353094203252,0.196308467114945,0.297046400327086,0,0,0.281951753939561,0,0.699588091474503,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.20686599172379,0.426467963801962,0,0,0,0,0,0,0,0,0.134704106029175,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.492603536699674,0.157421562627358,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.726991193897824,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0,1.7261543539329,0.512321413058201,0.945928919554341,1.37898272294647,0.645484683583826,1.35426486594342,0.564727018627814,0.272906150057846,0,0.918251677112708,0.641858054152187,0,1.31940520074686,0.997318288108159,0,0.290209238628584,0,0,0.75374599577023,1.0429658368404,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0.561643155732475,0.300353785683013,0.803627933485401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.501559486172034,0.32592226663359,0.473447805734733,0,0.557052284425868,0.589211814949674,2.87994062958707,2.16643091012012,0.768547918354051,0.650296737799391,0.164437904603676,0,0,0,0,0,0.339928028092699,0.766440987203842,1.03088233644789,0.253019692019503,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,3.74503511973591,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0,0.648473311192717,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,1.06726497369676,0,1.29681375438695,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0.446342914883745,0.0671834724867263,0,1.16495949527454,0.86661500537946,0.741742725430498,0.943649613958588,2.46068703786872,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,2.4913879725274,1.32506888912221,0,0,0.684347351537318,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,3.44045517414043,0.665574309221114,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.455324382702595,0.709618961301111,0,0,0.135939465953663,0,0,0,0.156986185701028,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.471353094203252,0.196308467114945,0.297046400327086,0,0,0.281951753939561,0,0.699588091474503,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.20686599172379,0.426467963801962,0,0,0,0,0,0,0,0,0.134704106029175,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@F5 | |short_description=p4@F5 | ||
}} | }} |
Latest revision as of 13:22, 18 September 2015
Short description: | p4@F5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_F5_5end |
Coexpression cluster: | C3902_Hepatocyte_liver_hepatoma_Neutrophils_medulla_placenta_CD4 |
Association with transcript: | 40bp_to_ENST00000546081_5end |
EntrezGene: | F5 |
HGNC: | 3542 |
UniProt: | B4DU26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.74e-26 | 3 |
granulocyte | 3.07e-17 | 8 |
blood cell | 1.35e-12 | 11 |
hepatocyte | 1.68e-11 | 12 |
myeloid leukocyte | 6.07e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.21e-15 | 25 |
anatomical boundary | 1.21e-15 | 25 |
hepatobiliary system | 1.21e-15 | 25 |
foregut-midgut junction | 1.21e-15 | 25 |
septum transversum | 1.21e-15 | 25 |
liver | 1.60e-15 | 19 |
digestive gland | 1.60e-15 | 19 |
liver bud | 1.60e-15 | 19 |
hepatic diverticulum | 2.40e-13 | 22 |
liver primordium | 2.40e-13 | 22 |
digestive tract diverticulum | 9.57e-13 | 23 |
epithelial sac | 1.09e-11 | 25 |
sac | 3.20e-11 | 26 |
exocrine gland | 2.47e-09 | 31 |
exocrine system | 2.47e-09 | 31 |
endocrine gland | 3.28e-08 | 35 |
gut epithelium | 7.85e-07 | 54 |
abdomen element | 7.85e-07 | 54 |
abdominal segment element | 7.85e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.06e-09 | 1 |
cutaneous T cell lymphoma | 1.06e-09 | 1 |
mycosis fungoides | 1.06e-09 | 1 |